Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05240

Experiment: Ceftazidime 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.12 mg/ml
1,152,825	-		AO353_05230	0.86	-0.5
1,152,893	+				-1.4
1,152,894	-				-1.1
1,152,894	-				+0.7
1,152,894	-				+0.5
1,152,894	-				+0.2
1,152,894	-				+0.2
1,152,894	-				+0.6
1,152,899	+				+0.4
1,152,900	-				-0.5
1,152,900	-				+1.9
1,152,901	+				-0.8
1,152,901	+				-1.2
1,152,901	+				+0.9
1,152,901	+				-0.9
1,152,901	+				-0.4
1,152,901	+				+0.7
1,152,901	+				-0.6
1,152,901	+				+0.1
1,152,901	+				+0.5
1,152,901	+				+0.0
1,152,901	+				+0.1
1,152,902	-				+1.5
1,152,902	-				+0.1
1,152,902	-				-0.9
1,152,902	-				+0.4
1,152,902	-				-0.6
1,152,902	-				-0.4
1,152,902	-				+0.2
1,152,902	-				-1.1
1,153,046	+				-0.4
1,153,046	+				-0.6
1,153,046	+				-0.2
1,153,046	+				-0.2
1,153,046	+				+1.4
1,153,046	+				+0.5
1,153,047	-				-1.1
1,153,047	-				-0.6
1,153,047	-				-1.2
1,153,047	-				-1.1
1,153,047	-				+0.7
1,153,047	-				-0.9
1,153,047	-				+0.6
1,153,047	-				+1.8
1,153,056	+				+1.1
1,153,076	-				-0.2
1,153,113	+				-0.2
1,153,114	-				+1.2
1,153,174	+		AO353_05235	0.17	+1.9
1,153,175	-		AO353_05235	0.17	+0.5
1,153,280	+		AO353_05235	0.34	+0.8
1,153,280	+		AO353_05235	0.34	-0.4
1,153,280	+		AO353_05235	0.34	+0.7
1,153,281	-		AO353_05235	0.34	-0.1
1,153,281	-		AO353_05235	0.34	+0.2
1,153,281	-		AO353_05235	0.34	+0.9
1,153,333	+		AO353_05235	0.42	+0.7
1,153,334	-		AO353_05235	0.43	-0.6
1,153,400	+		AO353_05235	0.53	-1.9
1,153,400	+		AO353_05235	0.53	+0.9
1,153,400	+		AO353_05235	0.53	-0.1
1,153,400	+		AO353_05235	0.53	+1.5
1,153,400	+		AO353_05235	0.53	-0.3
1,153,400	+		AO353_05235	0.53	-0.1
1,153,400	+		AO353_05235	0.53	+0.9
1,153,400	+		AO353_05235	0.53	-0.5
1,153,400	+		AO353_05235	0.53	-0.2
1,153,400	+		AO353_05235	0.53	-1.4
1,153,400	+		AO353_05235	0.53	-2.0
1,153,401	-		AO353_05235	0.53	+0.9
1,153,401	-		AO353_05235	0.53	-0.6
1,153,401	-		AO353_05235	0.53	-0.1
1,153,401	-		AO353_05235	0.53	+1.5
1,153,437	+		AO353_05235	0.59	-1.9
1,153,437	+		AO353_05235	0.59	+0.5
1,153,437	+		AO353_05235	0.59	+0.4
1,153,437	+		AO353_05235	0.59	+1.0
1,153,437	+		AO353_05235	0.59	-0.8
1,153,437	+		AO353_05235	0.59	-0.9
1,153,437	+		AO353_05235	0.59	-1.6
1,153,437	+		AO353_05235	0.59	+1.5
1,153,437	+		AO353_05235	0.59	+1.4
1,153,437	+		AO353_05235	0.59	+0.3
1,153,437	+		AO353_05235	0.59	+0.9
1,153,438	-		AO353_05235	0.59	+0.3
1,153,438	-		AO353_05235	0.59	+1.5
1,153,438	-		AO353_05235	0.59	-1.1
1,153,438	-		AO353_05235	0.59	-1.0
1,153,438	-		AO353_05235	0.59	-1.4
1,153,438	-		AO353_05235	0.59	-0.3
1,153,438	-		AO353_05235	0.59	-1.2
1,153,438	-		AO353_05235	0.59	-1.2
1,153,438	-		AO353_05235	0.59	+1.4
1,153,438	-		AO353_05235	0.59	-1.8
1,153,438	-		AO353_05235	0.59	+0.9
1,153,438	-		AO353_05235	0.59	+0.4
1,153,558	+		AO353_05235	0.79	+1.1
1,153,558	+		AO353_05235	0.79	+1.8
1,153,558	+		AO353_05235	0.79	-2.2
1,153,558	+		AO353_05235	0.79	-0.8
1,153,559	-		AO353_05235	0.79	-0.6
1,153,559	-		AO353_05235	0.79	-0.1
1,153,559	-		AO353_05235	0.79	+0.4
1,153,559	-		AO353_05235	0.79	+0.7
1,153,559	-		AO353_05235	0.79	-1.3
1,153,559	-		AO353_05235	0.79	+0.5
1,153,577	+		AO353_05235	0.82	-0.1
1,153,733	+				-1.9
1,153,733	+				-0.1
1,153,733	+				-1.1
1,153,734	-				+2.4
1,154,084	+		AO353_05240	0.73	-3.0
1,154,084	+		AO353_05240	0.73	-0.2
1,154,084	+		AO353_05240	0.73	-0.1
1,154,085	-		AO353_05240	0.73	-0.5
1,154,140	+		AO353_05240	0.84	-1.0
1,154,141	-		AO353_05240	0.85	-0.2
1,154,215	+				-1.3
1,154,216	-				-1.3
1,154,216	-				-0.1
1,154,216	-				+0.3
1,154,216	-				+0.6
1,154,216	-				+1.5