Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2328

Experiment: Ceftazidime 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.125 mg/ml
2,393,854	-		Synpcc7942_2326	0.46	+1.1
2,393,856	+		Synpcc7942_2326	0.46	+1.0
2,393,872	-		Synpcc7942_2326	0.48	-0.5
2,393,897	-		Synpcc7942_2326	0.52	+1.0
2,393,900	+		Synpcc7942_2326	0.52	+0.6
2,393,900	+		Synpcc7942_2326	0.52	+1.3
2,393,900	+		Synpcc7942_2326	0.52	-0.3
2,393,908	-		Synpcc7942_2326	0.53	+1.0
2,393,908	-		Synpcc7942_2326	0.53	+2.3
2,393,913	-		Synpcc7942_2326	0.54	-1.4
2,393,922	+		Synpcc7942_2326	0.55	-1.0
2,393,967	+		Synpcc7942_2326	0.61	-0.0
2,393,967	+		Synpcc7942_2326	0.61	-1.7
2,393,975	-		Synpcc7942_2326	0.62	-0.6
2,393,975	-		Synpcc7942_2326	0.62	+1.4
2,393,975	-		Synpcc7942_2326	0.62	-2.4
2,393,975	-		Synpcc7942_2326	0.62	+0.3
2,393,976	-		Synpcc7942_2326	0.62	-1.2
2,393,976	-		Synpcc7942_2326	0.62	+1.0
2,393,977	-		Synpcc7942_2326	0.62	-0.0
2,393,977	-		Synpcc7942_2326	0.62	+1.0
2,394,006	+		Synpcc7942_2326	0.66	+1.0
2,394,007	+		Synpcc7942_2326	0.66	+0.9
2,394,014	+		Synpcc7942_2326	0.67	-0.0
2,394,014	-		Synpcc7942_2326	0.67	+1.1
2,394,015	-		Synpcc7942_2326	0.67	-1.4
2,394,015	-		Synpcc7942_2326	0.67	+0.1
2,394,057	+		Synpcc7942_2326	0.73	+2.3
2,394,057	+		Synpcc7942_2326	0.73	+2.1
2,394,060	+				+1.0
2,394,112	-		Synpcc7942_2326	0.80	-1.9
2,394,325	-				-1.4
2,394,722	+				-0.6
2,394,823	+				-1.0
2,394,906	+				-2.0
2,394,914	-				-0.6
2,394,929	+				-1.0
2,394,929	+				+2.3
2,394,929	-				+0.1
2,394,965	+		Synpcc7942_2328	0.12	+0.3
2,394,967	+		Synpcc7942_2328	0.12	-0.8
2,394,968	-		Synpcc7942_2328	0.12	+1.0
2,394,989	+		Synpcc7942_2328	0.14	-0.2
2,394,989	+		Synpcc7942_2328	0.14	+2.7
2,394,989	+		Synpcc7942_2328	0.14	+0.6
2,394,989	+		Synpcc7942_2328	0.14	-0.0
2,394,991	+		Synpcc7942_2328	0.14	+2.5
2,394,997	-		Synpcc7942_2328	0.15	-0.4
2,394,997	-		Synpcc7942_2328	0.15	-0.7
2,394,997	-		Synpcc7942_2328	0.15	-0.0
2,394,997	-		Synpcc7942_2328	0.15	+0.6
2,395,021	+		Synpcc7942_2328	0.17	-0.0
2,395,053	+		Synpcc7942_2328	0.20	+3.4
2,395,061	-		Synpcc7942_2328	0.21	+3.7
2,395,061	-				-0.0
2,395,085	+		Synpcc7942_2328	0.23	+1.7
2,395,097	+		Synpcc7942_2328	0.24	+1.5
2,395,149	+		Synpcc7942_2328	0.29	-3.0
2,395,157	-		Synpcc7942_2328	0.29	+2.3
2,395,157	-		Synpcc7942_2328	0.29	-2.2
2,395,157	-		Synpcc7942_2328	0.29	+2.1
2,395,162	-		Synpcc7942_2328	0.30	+1.4
2,395,229	+		Synpcc7942_2328	0.36	-1.2
2,395,234	+		Synpcc7942_2328	0.36	+2.2
2,395,237	-		Synpcc7942_2328	0.37	+1.2
2,395,237	-		Synpcc7942_2328	0.37	-0.9
2,395,237	-		Synpcc7942_2328	0.37	-0.6
2,395,237	-		Synpcc7942_2328	0.37	+4.8
2,395,237	-		Synpcc7942_2328	0.37	+4.4
2,395,237	-		Synpcc7942_2328	0.37	+2.1
2,395,251	+		Synpcc7942_2328	0.38	-1.0
2,395,259	-		Synpcc7942_2328	0.39	-1.9
2,395,259	-		Synpcc7942_2328	0.39	+2.7
2,395,278	+		Synpcc7942_2328	0.40	-2.5
2,395,286	-		Synpcc7942_2328	0.41	+0.4
2,395,296	+		Synpcc7942_2328	0.42	+4.6
2,395,306	+		Synpcc7942_2328	0.43	+0.6
2,395,313	-		Synpcc7942_2328	0.44	-0.0
2,395,323	-		Synpcc7942_2328	0.45	+4.5
2,395,325	+		Synpcc7942_2328	0.45	+1.4
2,395,325	+		Synpcc7942_2328	0.45	+1.2
2,395,328	-		Synpcc7942_2328	0.45	-1.4
2,395,328	-		Synpcc7942_2328	0.45	+3.2
2,395,328	-		Synpcc7942_2328	0.45	-0.0
2,395,328	-		Synpcc7942_2328	0.45	-1.9
2,395,333	-		Synpcc7942_2328	0.46	+1.8
2,395,333	-		Synpcc7942_2328	0.46	+2.7
2,395,333	-		Synpcc7942_2328	0.46	+1.8
2,395,333	-		Synpcc7942_2328	0.46	+1.9
2,395,343	-		Synpcc7942_2328	0.46	-0.9
2,395,363	+		Synpcc7942_2328	0.48	+0.2
2,395,368	+		Synpcc7942_2328	0.49	+2.8
2,395,368	+		Synpcc7942_2328	0.49	+2.3
2,395,376	-		Synpcc7942_2328	0.49	-0.0
2,395,396	-		Synpcc7942_2328	0.51	+3.4
2,395,406	-		Synpcc7942_2328	0.52	-0.4
2,395,438	+		Synpcc7942_2328	0.55	+1.8
2,395,438	+		Synpcc7942_2328	0.55	+1.0
2,395,439	+		Synpcc7942_2328	0.55	+1.4
2,395,446	-		Synpcc7942_2328	0.56	-1.4
2,395,462	-		Synpcc7942_2328	0.57	+1.2
2,395,463	-		Synpcc7942_2328	0.57	-1.6
2,395,463	-		Synpcc7942_2328	0.57	-2.2
2,395,463	-		Synpcc7942_2328	0.57	-1.0
2,395,465	+		Synpcc7942_2328	0.58	+2.4
2,395,465	+		Synpcc7942_2328	0.58	+3.2
2,395,465	+		Synpcc7942_2328	0.58	-0.0
2,395,465	+		Synpcc7942_2328	0.58	+1.4
2,395,465	+		Synpcc7942_2328	0.58	+3.9
2,395,465	+		Synpcc7942_2328	0.58	+0.5
2,395,465	+		Synpcc7942_2328	0.58	+2.9
2,395,471	-				-0.0
2,395,471	-		Synpcc7942_2328	0.58	-0.0
2,395,473	-		Synpcc7942_2328	0.58	+0.4
2,395,473	-		Synpcc7942_2328	0.58	+5.8
2,395,490	+		Synpcc7942_2328	0.60	+4.1
2,395,490	+		Synpcc7942_2328	0.60	-1.0
2,395,490	+		Synpcc7942_2328	0.60	+1.0
2,395,493	-		Synpcc7942_2328	0.60	+2.4
2,395,498	-		Synpcc7942_2328	0.61	-0.5
2,395,535	+		Synpcc7942_2328	0.64	-0.3
2,395,557	+		Synpcc7942_2328	0.66	-0.0
2,395,608	+		Synpcc7942_2328	0.71	+1.6
2,395,665	-				-0.0
2,395,667	-		Synpcc7942_2328	0.76	+4.7
2,395,668	-		Synpcc7942_2328	0.76	-0.6
2,395,669	+		Synpcc7942_2328	0.76	+2.4
2,395,681	+		Synpcc7942_2328	0.77	-0.8
2,395,682	+		Synpcc7942_2328	0.77	+4.0
2,395,690	-		Synpcc7942_2328	0.78	-1.9
2,395,690	-		Synpcc7942_2328	0.78	-0.0
2,395,700	-		Synpcc7942_2328	0.79	-0.6
2,395,742	-		Synpcc7942_2328	0.83	+2.0
2,395,756	+		Synpcc7942_2328	0.84	+2.9
2,395,772	+				+1.0
2,395,777	+		Synpcc7942_2328	0.86	+1.2
2,395,953	+				-0.6
2,395,961	-				-0.9
2,395,992	-				+0.0
2,396,138	+		Synpcc7942_2329	0.17	+1.7
2,396,173	+		Synpcc7942_2329	0.20	-0.1
2,396,178	+		Synpcc7942_2329	0.20	-1.9
2,396,181	+		Synpcc7942_2329	0.20	-2.3
2,396,181	+		Synpcc7942_2329	0.20	+0.3
2,396,188	+		Synpcc7942_2329	0.21	+0.8
2,396,189	-		Synpcc7942_2329	0.21	-2.6
2,396,189	-		Synpcc7942_2329	0.21	-0.6
2,396,191	-		Synpcc7942_2329	0.21	+1.0
2,396,207	-		Synpcc7942_2329	0.22	-1.0
2,396,220	+		Synpcc7942_2329	0.23	+1.0
2,396,228	-		Synpcc7942_2329	0.24	-0.4
2,396,280	+		Synpcc7942_2329	0.28	+0.7
2,396,280	+		Synpcc7942_2329	0.28	+2.0
2,396,280	+		Synpcc7942_2329	0.28	+1.0
2,396,280	+		Synpcc7942_2329	0.28	+0.8
2,396,280	+		Synpcc7942_2329	0.28	-0.3
2,396,280	+		Synpcc7942_2329	0.28	-0.9
2,396,285	+		Synpcc7942_2329	0.28	-1.3
2,396,285	+		Synpcc7942_2329	0.28	+0.5
2,396,288	-		Synpcc7942_2329	0.29	-1.0
2,396,288	-		Synpcc7942_2329	0.29	-0.6
2,396,288	-		Synpcc7942_2329	0.29	+1.0
2,396,290	+		Synpcc7942_2329	0.29	+0.3
2,396,293	-		Synpcc7942_2329	0.29	-0.4
2,396,353	+		Synpcc7942_2329	0.34	+1.1
2,396,353	+		Synpcc7942_2329	0.34	-1.0
2,396,353	+		Synpcc7942_2329	0.34	-0.6
2,396,361	-		Synpcc7942_2329	0.34	-1.7
2,396,361	-		Synpcc7942_2329	0.34	+0.1
2,396,361	-		Synpcc7942_2329	0.34	+0.7
2,396,376	-		Synpcc7942_2329	0.35	-1.6
2,396,378	+				-0.6
2,396,494	+		Synpcc7942_2329	0.45	-1.2
2,396,494	+		Synpcc7942_2329	0.45	+0.2
2,396,494	+		Synpcc7942_2329	0.45	+1.0
2,396,494	+		Synpcc7942_2329	0.45	-0.4
2,396,502	-		Synpcc7942_2329	0.45	-0.0
2,396,502	-		Synpcc7942_2329	0.45	+1.0
2,396,502	-		Synpcc7942_2329	0.45	-0.4
2,396,503	-		Synpcc7942_2329	0.45	+1.3
2,396,503	-		Synpcc7942_2329	0.45	+0.3
2,396,505	+		Synpcc7942_2329	0.46	+3.5
2,396,526	+		Synpcc7942_2329	0.47	-0.0
2,396,528	+		Synpcc7942_2329	0.47	+2.7
2,396,528	+		Synpcc7942_2329	0.47	-1.0
2,396,536	-		Synpcc7942_2329	0.48	-0.2
2,396,536	-		Synpcc7942_2329	0.48	-0.8
2,396,568	+		Synpcc7942_2329	0.51	+1.3
2,396,601	+		Synpcc7942_2329	0.53	+1.8
2,396,631	-		Synpcc7942_2329	0.55	-2.7
2,396,631	-		Synpcc7942_2329	0.55	+1.0
2,396,632	+		Synpcc7942_2329	0.56	-0.0
2,396,640	-		Synpcc7942_2329	0.56	+0.3
2,396,648	+		Synpcc7942_2329	0.57	-0.3
2,396,674	+		Synpcc7942_2329	0.59	+1.3
2,396,676	-		Synpcc7942_2329	0.59	+1.7
2,396,682	-		Synpcc7942_2329	0.59	-0.0
2,396,682	-		Synpcc7942_2329	0.59	-0.6
2,396,682	-		Synpcc7942_2329	0.59	-1.0
2,396,726	+		Synpcc7942_2329	0.63	+0.4
2,396,734	-		Synpcc7942_2329	0.64	-0.4
2,396,734	-		Synpcc7942_2329	0.64	+1.4
2,396,804	+		Synpcc7942_2329	0.69	+1.0
2,396,809	+		Synpcc7942_2329	0.69	+1.3
2,396,831	+		Synpcc7942_2329	0.71	-0.4
2,396,836	+		Synpcc7942_2329	0.72	-1.5
2,396,838	+		Synpcc7942_2329	0.72	+2.8
2,396,839	-		Synpcc7942_2329	0.72	+0.1
2,396,846	-		Synpcc7942_2329	0.72	-1.9
2,396,875	+		Synpcc7942_2329	0.75	+3.0
2,396,883	-		Synpcc7942_2329	0.75	-0.6
2,396,889	+		Synpcc7942_2329	0.76	+0.6
2,396,889	+		Synpcc7942_2329	0.76	+0.1
2,396,889	+		Synpcc7942_2329	0.76	-1.7
2,396,890	+		Synpcc7942_2329	0.76	+1.1
2,396,897	-		Synpcc7942_2329	0.76	+2.8
2,396,897	-		Synpcc7942_2329	0.76	+2.1
2,396,907	+		Synpcc7942_2329	0.77	-0.0
2,396,907	-		Synpcc7942_2329	0.77	-0.3
2,396,910	-		Synpcc7942_2329	0.77	-0.1
2,396,912	+		Synpcc7942_2329	0.77	+0.8
2,396,915	-		Synpcc7942_2329	0.78	-2.2
2,396,917	+		Synpcc7942_2329	0.78	-0.7
2,396,925	-		Synpcc7942_2329	0.79	-2.0
2,396,925	-		Synpcc7942_2329	0.79	-0.4