Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1887

Experiment: Ceftazidime 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.125 mg/ml
1,958,536	-				-0.6
1,958,556	+	recJ	Synpcc7942_1886	0.55	+1.0
1,958,594	+	recJ	Synpcc7942_1886	0.57	+1.0
1,958,604	-	recJ	Synpcc7942_1886	0.58	-0.6
1,958,614	+	recJ	Synpcc7942_1886	0.58	-1.6
1,958,749	+	recJ	Synpcc7942_1886	0.65	-0.6
1,958,753	+				-0.6
1,958,772	-	recJ	Synpcc7942_1886	0.66	-0.6
1,958,821	-	recJ	Synpcc7942_1886	0.68	+0.6
1,958,920	-	recJ	Synpcc7942_1886	0.73	-1.8
1,959,054	+	recJ	Synpcc7942_1886	0.80	-1.8
1,959,054	+				+1.0
1,959,130	-	recJ	Synpcc7942_1886	0.83	-1.0
1,959,244	-	recJ	Synpcc7942_1886	0.89	-0.6
1,959,348	+				+1.0
1,959,420	-				-2.4
1,959,539	+				+0.0
1,960,623	+		Synpcc7942_1887	0.85	-2.3
1,960,930	-				+2.2
1,960,978	+		Synpcc7942_1888	0.12	-1.8
1,961,016	+				-1.3
1,961,049	-		Synpcc7942_1888	0.19	-1.0
1,961,059	-		Synpcc7942_1888	0.20	+0.4
1,961,066	-		Synpcc7942_1888	0.21	+1.6
1,961,117	+		Synpcc7942_1888	0.26	+0.0
1,961,117	+		Synpcc7942_1888	0.26	-0.6
1,961,117	+		Synpcc7942_1888	0.26	-0.7
1,961,125	+		Synpcc7942_1888	0.26	+0.1
1,961,125	-		Synpcc7942_1888	0.26	-0.7
1,961,125	-		Synpcc7942_1888	0.26	+2.0
1,961,125	-		Synpcc7942_1888	0.26	+0.0
1,961,125	-		Synpcc7942_1888	0.26	+1.3
1,961,125	-		Synpcc7942_1888	0.26	-0.3
1,961,125	-		Synpcc7942_1888	0.26	+0.4
1,961,125	-		Synpcc7942_1888	0.26	-1.8
1,961,125	-		Synpcc7942_1888	0.26	-2.7
1,961,125	-		Synpcc7942_1888	0.26	-0.4
1,961,207	-		Synpcc7942_1888	0.34	-0.3
1,961,270	+		Synpcc7942_1888	0.40	-1.1
1,961,410	+		Synpcc7942_1888	0.54	-0.5
1,961,473	+		Synpcc7942_1888	0.60	+3.3
1,961,517	+		Synpcc7942_1888	0.64	+1.6
1,961,525	-		Synpcc7942_1888	0.65	-1.0
1,961,575	-		Synpcc7942_1888	0.70	+0.9
1,961,632	+		Synpcc7942_1888	0.75	+2.2
1,961,692	-		Synpcc7942_1888	0.81	-0.4
1,961,692	-		Synpcc7942_1888	0.81	-0.2
1,961,692	-		Synpcc7942_1888	0.81	-0.4
1,961,692	-		Synpcc7942_1888	0.81	-2.0
1,961,714	+		Synpcc7942_1888	0.83	-0.6
1,961,714	+		Synpcc7942_1888	0.83	+1.0
1,961,714	+		Synpcc7942_1888	0.83	-0.1
1,961,714	+		Synpcc7942_1888	0.83	-1.8
1,961,722	-		Synpcc7942_1888	0.84	+0.1
1,961,733	-		Synpcc7942_1888	0.85	+0.0
1,961,758	+		Synpcc7942_1888	0.87	+1.4
1,961,808	+				-1.2