Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1770

Experiment: Ceftazidime 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.125 mg/ml
1,835,756	-		Synpcc7942_1768	0.20	+0.8
1,835,758	+		Synpcc7942_1768	0.20	+1.0
1,835,758	+		Synpcc7942_1768	0.20	-1.0
1,835,758	-		Synpcc7942_1768	0.20	-1.7
1,835,758	-		Synpcc7942_1768	0.20	-0.3
1,835,758	-		Synpcc7942_1768	0.20	-1.6
1,835,758	-		Synpcc7942_1768	0.20	-1.0
1,835,774	+		Synpcc7942_1768	0.22	+1.4
1,835,784	+		Synpcc7942_1768	0.23	+0.6
1,835,790	-		Synpcc7942_1768	0.24	-1.0
1,835,792	+		Synpcc7942_1768	0.24	+1.6
1,835,792	-		Synpcc7942_1768	0.24	-0.2
1,835,792	-		Synpcc7942_1768	0.24	-1.0
1,835,793	+		Synpcc7942_1768	0.24	-0.6
1,835,798	+		Synpcc7942_1768	0.25	+1.1
1,835,800	-		Synpcc7942_1768	0.25	-1.3
1,835,801	-		Synpcc7942_1768	0.25	-1.3
1,835,829	+		Synpcc7942_1768	0.29	-1.3
1,835,829	+		Synpcc7942_1768	0.29	+0.7
1,835,834	+		Synpcc7942_1768	0.29	+0.2
1,835,834	+		Synpcc7942_1768	0.29	+1.0
1,835,837	-		Synpcc7942_1768	0.30	+2.7
1,835,837	-		Synpcc7942_1768	0.30	-0.5
1,835,855	-				+0.4
1,835,865	+		Synpcc7942_1768	0.33	-1.0
1,835,868	-		Synpcc7942_1768	0.33	-1.6
1,835,875	+		Synpcc7942_1768	0.34	-1.0
1,835,883	+		Synpcc7942_1768	0.35	+0.7
1,835,884	-		Synpcc7942_1768	0.35	-0.9
1,835,891	-		Synpcc7942_1768	0.36	+0.2
1,835,891	-		Synpcc7942_1768	0.36	+0.4
1,835,916	-		Synpcc7942_1768	0.39	+0.4
1,835,926	+		Synpcc7942_1768	0.41	-0.1
1,835,953	+		Synpcc7942_1768	0.44	-2.0
1,835,979	-		Synpcc7942_1768	0.47	+0.8
1,835,979	-		Synpcc7942_1768	0.47	-1.6
1,835,979	-		Synpcc7942_1768	0.47	-0.0
1,835,979	-		Synpcc7942_1768	0.47	-0.4
1,835,989	-		Synpcc7942_1768	0.48	-0.4
1,836,048	+		Synpcc7942_1768	0.56	+0.8
1,836,048	+		Synpcc7942_1768	0.56	+1.4
1,836,056	-		Synpcc7942_1768	0.57	+1.0
1,836,056	-		Synpcc7942_1768	0.57	+1.3
1,836,056	-		Synpcc7942_1768	0.57	+1.9
1,836,072	+		Synpcc7942_1768	0.59	+2.2
1,836,076	-		Synpcc7942_1768	0.59	+0.8
1,836,078	+		Synpcc7942_1768	0.59	-0.6
1,836,091	-		Synpcc7942_1768	0.61	-0.2
1,836,096	+		Synpcc7942_1768	0.62	+3.1
1,836,104	-		Synpcc7942_1768	0.62	-0.8
1,836,119	+		Synpcc7942_1768	0.64	-0.6
1,836,124	+		Synpcc7942_1768	0.65	-0.2
1,836,126	+		Synpcc7942_1768	0.65	+3.0
1,836,127	-		Synpcc7942_1768	0.65	+0.3
1,836,132	-		Synpcc7942_1768	0.66	+1.1
1,836,134	-		Synpcc7942_1768	0.66	+0.5
1,836,134	-		Synpcc7942_1768	0.66	+1.6
1,836,134	-		Synpcc7942_1768	0.66	+0.6
1,836,164	+		Synpcc7942_1768	0.70	+0.2
1,836,164	+		Synpcc7942_1768	0.70	-1.4
1,836,164	+		Synpcc7942_1768	0.70	+3.0
1,836,164	+		Synpcc7942_1768	0.70	-1.3
1,836,164	+		Synpcc7942_1768	0.70	+1.4
1,836,164	+		Synpcc7942_1768	0.70	-1.6
1,836,164	+		Synpcc7942_1768	0.70	-1.0
1,836,172	-		Synpcc7942_1768	0.71	+0.6
1,836,172	-		Synpcc7942_1768	0.71	+1.3
1,836,172	-		Synpcc7942_1768	0.71	-1.0
1,836,172	-		Synpcc7942_1768	0.71	+2.0
1,836,195	+		Synpcc7942_1768	0.74	+5.4
1,836,213	+		Synpcc7942_1768	0.76	+0.4
1,836,213	+		Synpcc7942_1768	0.76	+0.1
1,836,213	+		Synpcc7942_1768	0.76	+0.0
1,836,218	+		Synpcc7942_1768	0.77	+0.4
1,836,218	+		Synpcc7942_1768	0.77	-1.6
1,836,221	-		Synpcc7942_1768	0.77	-0.3
1,836,222	-		Synpcc7942_1768	0.77	-1.1
1,836,226	-		Synpcc7942_1768	0.77	-0.0
1,836,229	+		Synpcc7942_1768	0.78	-1.6
1,836,264	-		Synpcc7942_1768	0.82	-0.2
1,836,291	-		Synpcc7942_1768	0.85	-0.5
1,836,319	-		Synpcc7942_1768	0.89	-1.0
1,836,320	+		Synpcc7942_1768	0.89	+0.2
1,836,328	+				+0.7
1,836,340	+				+1.9
1,836,352	+				+1.2
1,836,355	-				-0.0
1,836,360	-				+1.2
1,836,386	-				-1.2
1,836,390	+				+1.0
1,836,398	-				+1.0
1,836,398	-				-0.0
1,836,409	+				-0.0
1,836,414	+				-0.0
1,836,417	-				+0.6
1,836,422	-				-2.6
1,836,467	-		Synpcc7942_1769	0.15	+0.4
1,836,478	+		Synpcc7942_1769	0.18	-1.1
1,836,486	-		Synpcc7942_1769	0.20	+1.0
1,836,493	+				-0.0
1,836,525	+		Synpcc7942_1769	0.30	+2.4
1,836,525	+		Synpcc7942_1769	0.30	-0.0
1,836,525	+		Synpcc7942_1769	0.30	+0.4
1,836,525	+		Synpcc7942_1769	0.30	+1.0
1,836,525	+		Synpcc7942_1769	0.30	+0.4
1,836,525	+		Synpcc7942_1769	0.30	-3.0
1,836,533	-		Synpcc7942_1769	0.32	-1.1
1,836,533	-		Synpcc7942_1769	0.32	+0.7
1,836,533	-		Synpcc7942_1769	0.32	+1.0
1,836,546	-		Synpcc7942_1769	0.36	-0.2
1,836,593	+		Synpcc7942_1769	0.48	-2.6
1,836,598	+		Synpcc7942_1769	0.49	-0.7
1,836,621	+		Synpcc7942_1769	0.55	+2.0
1,836,621	+		Synpcc7942_1769	0.55	-0.5
1,836,631	-		Synpcc7942_1769	0.58	+1.0
1,836,666	-		Synpcc7942_1769	0.67	-1.3
1,836,699	-		Synpcc7942_1769	0.75	+1.0
1,836,718	+		Synpcc7942_1769	0.80	-0.0
1,836,733	+		Synpcc7942_1769	0.84	+0.2
1,836,735	+		Synpcc7942_1769	0.84	+0.7
1,836,746	+		Synpcc7942_1769	0.87	-0.4
1,836,771	+				+0.2
1,836,825	+		Synpcc7942_1770	0.25	+3.8
1,836,825	+		Synpcc7942_1770	0.25	+4.1
1,836,833	-		Synpcc7942_1770	0.28	+0.5
1,836,833	-		Synpcc7942_1770	0.28	+4.4
1,836,833	-		Synpcc7942_1770	0.28	+1.4
1,836,849	+		Synpcc7942_1770	0.33	+2.2
1,836,859	+		Synpcc7942_1770	0.36	+1.0
1,836,868	-		Synpcc7942_1770	0.39	+0.4
1,836,881	+		Synpcc7942_1770	0.44	-1.3
1,836,921	-		Synpcc7942_1770	0.57	+2.0
1,836,921	-		Synpcc7942_1770	0.57	+1.6
1,836,949	+		Synpcc7942_1770	0.67	+2.8
1,836,957	+		Synpcc7942_1770	0.69	+2.2
1,836,968	-		Synpcc7942_1770	0.73	+1.6
1,836,979	+		Synpcc7942_1770	0.77	+2.3
1,837,000	-		Synpcc7942_1770	0.84	+0.4
1,837,007	+		Synpcc7942_1770	0.86	+2.3
1,837,014	-		Synpcc7942_1770	0.89	+1.0
1,837,038	-				+1.5
1,837,081	+				+0.2
1,837,081	+				+1.1
1,837,087	-				+1.9
1,837,089	-				+2.4
1,837,091	+				-0.0
1,837,100	+				-2.5
1,837,108	-				-2.5