Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0008

Experiment: Ceftazidime 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.125 mg/ml
7,584	+				-0.3
7,595	-				+0.5
7,602	-				-1.0
7,604	+				+1.0
7,604	+				+2.0
7,604	+				-0.0
7,604	+				-0.9
7,612	-				-0.0
7,612	-				+2.3
7,612	-				+1.0
7,631	+				-1.9
7,655	+				+1.5
7,755	+				+0.2
7,758	-				+2.6
7,762	+				-0.0
7,762	+				+2.4
7,763	-				-0.4
7,764	+				-0.0
7,822	+		Synpcc7942_0006	0.10	-0.4
7,827	+		Synpcc7942_0006	0.12	-1.3
7,830	-		Synpcc7942_0006	0.12	-0.0
7,866	-		Synpcc7942_0006	0.21	-1.0
7,920	+		Synpcc7942_0006	0.34	-1.6
7,929	-		Synpcc7942_0006	0.36	-0.8
7,931	-		Synpcc7942_0006	0.37	-3.2
7,931	-		Synpcc7942_0006	0.37	-0.6
7,931	-		Synpcc7942_0006	0.37	-0.5
7,931	-		Synpcc7942_0006	0.37	-1.3
7,955	+		Synpcc7942_0006	0.43	-0.4
7,955	+		Synpcc7942_0006	0.43	-0.6
7,980	+		Synpcc7942_0006	0.49	-0.6
8,003	+		Synpcc7942_0006	0.54	-0.5
8,011	-		Synpcc7942_0006	0.56	-0.0
8,011	-		Synpcc7942_0006	0.56	-1.6
8,011	-		Synpcc7942_0006	0.56	+0.1
8,014	-		Synpcc7942_0006	0.57	+1.0
8,026	+		Synpcc7942_0006	0.60	-0.3
8,052	+		Synpcc7942_0006	0.66	+3.6
8,053	-		Synpcc7942_0006	0.66	+1.1
8,078	-		Synpcc7942_0006	0.72	-0.4
8,080	+		Synpcc7942_0006	0.73	-2.6
8,097	-		Synpcc7942_0006	0.77	-2.7
8,122	+		Synpcc7942_0006	0.83	+1.2
8,132	+		Synpcc7942_0006	0.85	-0.3
8,135	-		Synpcc7942_0006	0.86	+0.9
8,140	-		Synpcc7942_0006	0.87	+0.3
8,150	-		Synpcc7942_0006	0.90	-0.6
8,208	+				-0.9
8,216	-				+0.3
8,219	-				-0.1
8,267	+		Synpcc7942_0007	0.22	-0.1
8,292	+		Synpcc7942_0007	0.29	-1.0
8,292	+		Synpcc7942_0007	0.29	-1.5
8,292	+		Synpcc7942_0007	0.29	-1.2
8,292	+		Synpcc7942_0007	0.29	-0.8
8,298	+		Synpcc7942_0007	0.31	+0.4
8,320	-		Synpcc7942_0007	0.37	-1.3
8,320	-		Synpcc7942_0007	0.37	+0.3
8,320	-		Synpcc7942_0007	0.37	+0.3
8,320	-		Synpcc7942_0007	0.37	-1.2
8,346	+		Synpcc7942_0007	0.45	-0.4
8,354	-		Synpcc7942_0007	0.47	+0.3
8,357	-		Synpcc7942_0007	0.48	-0.6
8,405	-		Synpcc7942_0007	0.62	+1.5
8,410	+		Synpcc7942_0007	0.63	+3.4
8,410	+		Synpcc7942_0007	0.63	-1.0
8,423	+		Synpcc7942_0007	0.67	+0.5
8,440	+		Synpcc7942_0007	0.72	-1.5
8,448	-		Synpcc7942_0007	0.74	-0.0
8,458	-		Synpcc7942_0007	0.77	-0.7
8,460	+		Synpcc7942_0007	0.77	+1.0
8,468	-		Synpcc7942_0007	0.79	+1.4
8,490	-		Synpcc7942_0007	0.86	-1.0
8,501	+		Synpcc7942_0007	0.89	-0.3
8,501	+		Synpcc7942_0007	0.89	+0.4
8,508	-				-0.6
8,511	+				+2.1
8,532	+				+2.2
8,534	+				+4.3
8,544	-				+1.0
8,564	+				+1.1
8,567	+				+0.4
8,572	-		Synpcc7942_0008	0.11	-1.6
8,643	+		Synpcc7942_0008	0.33	-1.9
8,643	+		Synpcc7942_0008	0.33	-0.4
8,643	+		Synpcc7942_0008	0.33	-1.0
8,643	+		Synpcc7942_0008	0.33	+1.0
8,651	-		Synpcc7942_0008	0.35	+1.0
8,651	-		Synpcc7942_0008	0.35	-1.7
8,669	-		Synpcc7942_0008	0.41	-1.9
8,696	-		Synpcc7942_0008	0.49	+1.0
8,710	+		Synpcc7942_0008	0.54	-2.0
8,715	+		Synpcc7942_0008	0.55	-1.3
8,715	+		Synpcc7942_0008	0.55	-0.6
8,718	-		Synpcc7942_0008	0.56	-0.2
8,720	+		Synpcc7942_0008	0.57	-0.7
8,720	+		Synpcc7942_0008	0.57	-1.3
8,720	+		Synpcc7942_0008	0.57	+2.6
8,720	+		Synpcc7942_0008	0.57	-0.7
8,728	-		Synpcc7942_0008	0.59	+0.4
8,728	-		Synpcc7942_0008	0.59	-0.4
8,728	-		Synpcc7942_0008	0.59	-1.6
8,738	+		Synpcc7942_0008	0.62	-0.6
8,783	+		Synpcc7942_0008	0.76	-1.0
8,801	+		Synpcc7942_0008	0.82	+0.0
8,801	+		Synpcc7942_0008	0.82	-1.3
8,801	+		Synpcc7942_0008	0.82	-1.0
8,806	+		Synpcc7942_0008	0.83	-1.7
8,809	-		Synpcc7942_0008	0.84	+1.0
8,809	-		Synpcc7942_0008	0.84	-1.5
8,809	-		Synpcc7942_0008	0.84	-0.6
8,809	-		Synpcc7942_0008	0.84	-1.6
8,809	-		Synpcc7942_0008	0.84	-1.8
8,846	+				+0.9
8,859	+				-0.0
8,868	+				+1.0
8,881	-				-0.3
8,897	+				+1.6
8,903	+				+1.0
8,905	-				-0.6