Experiment: 2-Deoxy-D-Ribose 20 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04583 and H281DRAFT_04584 are separated by 45 nucleotides H281DRAFT_04584 and H281DRAFT_04585 are separated by 260 nucleotides H281DRAFT_04585 and H281DRAFT_04586 are separated by 48 nucleotides
H281DRAFT_04583: H281DRAFT_04583 - hypothetical protein, at 316,747 to 316,992
_04583
H281DRAFT_04584: H281DRAFT_04584 - transcriptional regulator, AlpA family, at 317,038 to 317,562
_04584
H281DRAFT_04585: H281DRAFT_04585 - hypothetical protein, at 317,823 to 318,248
_04585
H281DRAFT_04586: H281DRAFT_04586 - hypothetical protein, at 318,297 to 319,493
_04586
Position (kb) 317
318
319 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 316.858 kb on + strand, within H281DRAFT_04583 at 316.858 kb on + strand at 316.858 kb on + strand, within H281DRAFT_04583 at 316.859 kb on - strand, within H281DRAFT_04583 at 316.859 kb on - strand, within H281DRAFT_04583 at 316.868 kb on - strand, within H281DRAFT_04583 at 316.870 kb on - strand, within H281DRAFT_04583 at 316.870 kb on - strand, within H281DRAFT_04583 at 317.032 kb on + strand at 317.032 kb on + strand at 317.033 kb on - strand at 317.045 kb on - strand at 317.232 kb on + strand, within H281DRAFT_04584 at 317.443 kb on + strand, within H281DRAFT_04584 at 317.462 kb on + strand at 317.630 kb on + strand at 317.630 kb on + strand at 317.631 kb on - strand at 317.637 kb on + strand at 317.638 kb on - strand at 317.638 kb on - strand at 317.638 kb on - strand at 317.695 kb on + strand at 317.839 kb on + strand at 317.839 kb on + strand at 317.840 kb on - strand at 318.062 kb on - strand, within H281DRAFT_04585 at 318.144 kb on - strand, within H281DRAFT_04585 at 318.246 kb on + strand at 318.292 kb on + strand at 318.292 kb on + strand at 318.292 kb on + strand at 318.293 kb on - strand at 318.293 kb on - strand at 318.293 kb on - strand at 318.293 kb on - strand at 318.296 kb on + strand at 318.296 kb on + strand at 318.296 kb on + strand at 318.297 kb on - strand at 318.309 kb on + strand at 318.309 kb on + strand at 318.391 kb on + strand at 318.392 kb on - strand at 318.401 kb on + strand at 318.401 kb on + strand at 318.402 kb on - strand at 318.487 kb on - strand, within H281DRAFT_04586 at 318.521 kb on + strand, within H281DRAFT_04586 at 318.521 kb on + strand, within H281DRAFT_04586 at 318.521 kb on + strand, within H281DRAFT_04586 at 318.521 kb on + strand, within H281DRAFT_04586 at 318.521 kb on + strand, within H281DRAFT_04586 at 318.522 kb on - strand, within H281DRAFT_04586 at 318.562 kb on + strand, within H281DRAFT_04586 at 318.607 kb on - strand, within H281DRAFT_04586 at 318.631 kb on - strand, within H281DRAFT_04586 at 318.634 kb on - strand, within H281DRAFT_04586 at 318.634 kb on - strand, within H281DRAFT_04586 at 318.747 kb on + strand, within H281DRAFT_04586 at 318.747 kb on + strand, within H281DRAFT_04586 at 318.747 kb on + strand, within H281DRAFT_04586 at 318.748 kb on - strand, within H281DRAFT_04586 at 318.748 kb on - strand, within H281DRAFT_04586 at 318.748 kb on - strand, within H281DRAFT_04586 at 318.887 kb on + strand, within H281DRAFT_04586 at 318.887 kb on + strand, within H281DRAFT_04586 at 318.888 kb on - strand, within H281DRAFT_04586 at 318.952 kb on + strand, within H281DRAFT_04586 at 318.953 kb on - strand, within H281DRAFT_04586 at 318.953 kb on - strand, within H281DRAFT_04586 at 318.953 kb on - strand, within H281DRAFT_04586 at 318.953 kb on - strand, within H281DRAFT_04586 at 319.002 kb on + strand, within H281DRAFT_04586 at 319.002 kb on + strand, within H281DRAFT_04586 at 319.003 kb on - strand, within H281DRAFT_04586 at 319.011 kb on + strand, within H281DRAFT_04586 at 319.012 kb on - strand, within H281DRAFT_04586 at 319.012 kb on - strand, within H281DRAFT_04586 at 319.012 kb on - strand, within H281DRAFT_04586 at 319.121 kb on - strand, within H281DRAFT_04586
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 20 mM (C) remove 316,858 + H281DRAFT_04583 0.45 +1.1 316,858 + +1.4 316,858 + H281DRAFT_04583 0.45 +0.3 316,859 - H281DRAFT_04583 0.46 +0.1 316,859 - H281DRAFT_04583 0.46 +0.1 316,868 - H281DRAFT_04583 0.49 +0.5 316,870 - H281DRAFT_04583 0.50 +0.4 316,870 - H281DRAFT_04583 0.50 -0.7 317,032 + +0.5 317,032 + -0.0 317,033 - +0.7 317,045 - -0.2 317,232 + H281DRAFT_04584 0.37 +0.0 317,443 + H281DRAFT_04584 0.77 +0.7 317,462 + +2.3 317,630 + -0.2 317,630 + +0.7 317,631 - +1.4 317,637 + +0.3 317,638 - -0.5 317,638 - -0.5 317,638 - -0.9 317,695 + -1.3 317,839 + -0.4 317,839 + +0.1 317,840 - +1.0 318,062 - H281DRAFT_04585 0.56 -3.1 318,144 - H281DRAFT_04585 0.75 -1.1 318,246 + -0.1 318,292 + +1.5 318,292 + +0.1 318,292 + +0.5 318,293 - +0.2 318,293 - -0.3 318,293 - +0.2 318,293 - -0.4 318,296 + -0.0 318,296 + +1.8 318,296 + +0.5 318,297 - +0.2 318,309 + -1.5 318,309 + +0.1 318,391 + +1.3 318,392 - -0.8 318,401 + +1.1 318,401 + +0.0 318,402 - -0.7 318,487 - H281DRAFT_04586 0.16 -0.8 318,521 + H281DRAFT_04586 0.19 +0.6 318,521 + H281DRAFT_04586 0.19 -0.9 318,521 + H281DRAFT_04586 0.19 +0.3 318,521 + H281DRAFT_04586 0.19 +0.1 318,521 + H281DRAFT_04586 0.19 +0.4 318,522 - H281DRAFT_04586 0.19 +0.7 318,562 + H281DRAFT_04586 0.22 +0.4 318,607 - H281DRAFT_04586 0.26 -0.1 318,631 - H281DRAFT_04586 0.28 -0.2 318,634 - H281DRAFT_04586 0.28 -0.8 318,634 - H281DRAFT_04586 0.28 +1.1 318,747 + H281DRAFT_04586 0.38 +0.2 318,747 + H281DRAFT_04586 0.38 -0.1 318,747 + H281DRAFT_04586 0.38 +0.3 318,748 - H281DRAFT_04586 0.38 +0.1 318,748 - H281DRAFT_04586 0.38 +0.2 318,748 - H281DRAFT_04586 0.38 +0.2 318,887 + H281DRAFT_04586 0.49 +0.2 318,887 + H281DRAFT_04586 0.49 +0.6 318,888 - H281DRAFT_04586 0.49 +0.6 318,952 + H281DRAFT_04586 0.55 +0.6 318,953 - H281DRAFT_04586 0.55 +0.8 318,953 - H281DRAFT_04586 0.55 -0.1 318,953 - H281DRAFT_04586 0.55 -0.5 318,953 - H281DRAFT_04586 0.55 +0.3 319,002 + H281DRAFT_04586 0.59 +1.0 319,002 + H281DRAFT_04586 0.59 +1.1 319,003 - H281DRAFT_04586 0.59 +0.2 319,011 + H281DRAFT_04586 0.60 +0.4 319,012 - H281DRAFT_04586 0.60 -0.2 319,012 - H281DRAFT_04586 0.60 -0.5 319,012 - H281DRAFT_04586 0.60 +0.8 319,121 - H281DRAFT_04586 0.69 +0.6
Or see this region's nucleotide sequence