Experiment: 2-Deoxy-D-Ribose 20 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01560 and H281DRAFT_01561 are separated by 30 nucleotides H281DRAFT_01561 and H281DRAFT_01562 are separated by 153 nucleotides H281DRAFT_01562 and H281DRAFT_01563 are separated by 151 nucleotides
H281DRAFT_01560: H281DRAFT_01560 - hypothetical protein, at 431,767 to 432,537
_01560
H281DRAFT_01561: H281DRAFT_01561 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 432,568 to 433,332
_01561
H281DRAFT_01562: H281DRAFT_01562 - transcriptional regulator, LysR family, at 433,486 to 434,403
_01562
H281DRAFT_01563: H281DRAFT_01563 - MFS transporter, CP family, cyanate transporter, at 434,555 to 435,892
_01563
Position (kb) 433
434
435 Strain fitness (log2 ratio) -1
0
1 at 432.569 kb on + strand at 432.707 kb on + strand, within H281DRAFT_01561 at 433.379 kb on + strand at 433.405 kb on - strand at 434.005 kb on + strand, within H281DRAFT_01562 at 434.028 kb on + strand, within H281DRAFT_01562 at 434.028 kb on + strand, within H281DRAFT_01562 at 434.028 kb on + strand, within H281DRAFT_01562 at 434.029 kb on - strand, within H281DRAFT_01562 at 434.029 kb on - strand, within H281DRAFT_01562 at 434.029 kb on - strand, within H281DRAFT_01562 at 434.029 kb on - strand, within H281DRAFT_01562 at 434.029 kb on - strand, within H281DRAFT_01562 at 434.069 kb on - strand, within H281DRAFT_01562 at 434.262 kb on + strand, within H281DRAFT_01562 at 434.263 kb on - strand, within H281DRAFT_01562 at 434.299 kb on + strand, within H281DRAFT_01562 at 434.300 kb on - strand, within H281DRAFT_01562 at 434.356 kb on + strand at 434.484 kb on + strand at 434.485 kb on - strand at 434.498 kb on + strand at 434.498 kb on + strand at 434.540 kb on - strand at 434.844 kb on + strand, within H281DRAFT_01563 at 434.845 kb on - strand, within H281DRAFT_01563 at 434.877 kb on + strand, within H281DRAFT_01563 at 434.941 kb on + strand, within H281DRAFT_01563 at 434.978 kb on + strand, within H281DRAFT_01563 at 434.979 kb on - strand, within H281DRAFT_01563 at 435.368 kb on + strand, within H281DRAFT_01563 at 435.369 kb on - strand, within H281DRAFT_01563
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 20 mM (C) remove 432,569 + -0.1 432,707 + H281DRAFT_01561 0.18 +1.0 433,379 + +0.4 433,405 - -0.5 434,005 + H281DRAFT_01562 0.57 -1.3 434,028 + H281DRAFT_01562 0.59 +0.5 434,028 + H281DRAFT_01562 0.59 +0.8 434,028 + H281DRAFT_01562 0.59 -0.7 434,029 - H281DRAFT_01562 0.59 -0.3 434,029 - H281DRAFT_01562 0.59 +0.0 434,029 - H281DRAFT_01562 0.59 +0.8 434,029 - H281DRAFT_01562 0.59 +0.3 434,029 - H281DRAFT_01562 0.59 -0.7 434,069 - H281DRAFT_01562 0.64 +0.3 434,262 + H281DRAFT_01562 0.85 +0.1 434,263 - H281DRAFT_01562 0.85 -1.2 434,299 + H281DRAFT_01562 0.89 +0.2 434,300 - H281DRAFT_01562 0.89 -1.0 434,356 + -0.5 434,484 + -0.6 434,485 - +0.7 434,498 + -0.1 434,498 + -1.1 434,540 - -0.1 434,844 + H281DRAFT_01563 0.22 +0.1 434,845 - H281DRAFT_01563 0.22 -0.1 434,877 + H281DRAFT_01563 0.24 -0.2 434,941 + H281DRAFT_01563 0.29 +0.0 434,978 + H281DRAFT_01563 0.32 +0.3 434,979 - H281DRAFT_01563 0.32 +1.0 435,368 + H281DRAFT_01563 0.61 +0.4 435,369 - H281DRAFT_01563 0.61 +0.9
Or see this region's nucleotide sequence