Experiment: 2-Deoxy-D-Ribose 20 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01070 and H281DRAFT_01071 are separated by 37 nucleotides H281DRAFT_01071 and H281DRAFT_01072 are separated by 75 nucleotides H281DRAFT_01072 and H281DRAFT_01073 are separated by 20 nucleotides
H281DRAFT_01070: H281DRAFT_01070 - methyl-accepting chemotaxis sensory transducer with Cache sensor, at 1,202,057 to 1,203,943
_01070
H281DRAFT_01071: H281DRAFT_01071 - muconolactone delta-isomerase (EC 5.3.3.4), at 1,203,981 to 1,204,259
_01071
H281DRAFT_01072: H281DRAFT_01072 - muconate cycloisomerase (EC 5.5.1.1), at 1,204,335 to 1,205,546
_01072
H281DRAFT_01073: H281DRAFT_01073 - DNA-binding transcriptional regulator, LysR family, at 1,205,567 to 1,206,490
_01073
Position (kb) 1204
1205
1206 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 1203.492 kb on + strand, within H281DRAFT_01070 at 1203.493 kb on - strand, within H281DRAFT_01070 at 1203.982 kb on + strand at 1203.983 kb on - strand at 1204.097 kb on + strand, within H281DRAFT_01071 at 1204.574 kb on - strand, within H281DRAFT_01072 at 1204.625 kb on - strand, within H281DRAFT_01072 at 1205.245 kb on + strand, within H281DRAFT_01072 at 1205.245 kb on + strand, within H281DRAFT_01072 at 1205.725 kb on - strand, within H281DRAFT_01073 at 1205.725 kb on - strand, within H281DRAFT_01073 at 1205.830 kb on - strand, within H281DRAFT_01073 at 1205.830 kb on - strand, within H281DRAFT_01073 at 1205.830 kb on - strand, within H281DRAFT_01073 at 1206.384 kb on - strand, within H281DRAFT_01073 at 1206.384 kb on - strand, within H281DRAFT_01073 at 1206.507 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 20 mM (C) remove 1,203,492 + H281DRAFT_01070 0.76 +0.8 1,203,493 - H281DRAFT_01070 0.76 +0.6 1,203,982 + +0.1 1,203,983 - +0.2 1,204,097 + H281DRAFT_01071 0.42 -1.0 1,204,574 - H281DRAFT_01072 0.20 +0.3 1,204,625 - H281DRAFT_01072 0.24 +0.1 1,205,245 + H281DRAFT_01072 0.75 -3.9 1,205,245 + H281DRAFT_01072 0.75 -1.2 1,205,725 - H281DRAFT_01073 0.17 -1.2 1,205,725 - H281DRAFT_01073 0.17 -0.5 1,205,830 - H281DRAFT_01073 0.28 -0.0 1,205,830 - H281DRAFT_01073 0.28 -1.1 1,205,830 - H281DRAFT_01073 0.28 -0.7 1,206,384 - H281DRAFT_01073 0.88 -0.4 1,206,384 - H281DRAFT_01073 0.88 -0.7 1,206,507 - -2.5
Or see this region's nucleotide sequence