Experiment: spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3371 and Dsui_3372 are separated by 154 nucleotides Dsui_3372 and Dsui_3373 are separated by 16 nucleotides
Dsui_3371: Dsui_3371 - putative oxidoreductase, aryl-alcohol dehydrogenase like protein, at 3,612,055 to 3,613,107
_3371
Dsui_3372: Dsui_3372 - hypothetical protein, at 3,613,262 to 3,615,406
_3372
Dsui_3373: Dsui_3373 - Na+/phosphate symporter, at 3,615,423 to 3,617,114
_3373
Position (kb)
3613
3614
3615
3616 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6
7 at 3612.483 kb on + strand, within Dsui_3371 at 3612.491 kb on - strand, within Dsui_3371 at 3612.498 kb on + strand at 3612.498 kb on + strand, within Dsui_3371 at 3612.506 kb on - strand, within Dsui_3371 at 3612.557 kb on + strand, within Dsui_3371 at 3612.570 kb on + strand at 3612.623 kb on - strand, within Dsui_3371 at 3612.624 kb on + strand, within Dsui_3371 at 3612.652 kb on - strand, within Dsui_3371 at 3612.710 kb on + strand at 3612.718 kb on - strand, within Dsui_3371 at 3612.729 kb on + strand at 3612.955 kb on - strand, within Dsui_3371 at 3613.043 kb on - strand at 3613.101 kb on + strand at 3613.109 kb on - strand at 3613.121 kb on - strand at 3613.124 kb on - strand at 3613.156 kb on + strand at 3613.156 kb on + strand at 3613.164 kb on - strand at 3613.164 kb on - strand at 3613.164 kb on - strand at 3613.164 kb on - strand at 3613.164 kb on - strand at 3613.218 kb on + strand at 3613.269 kb on + strand at 3613.398 kb on - strand at 3613.436 kb on - strand at 3613.438 kb on + strand at 3613.470 kb on + strand at 3613.526 kb on + strand, within Dsui_3372 at 3613.627 kb on - strand, within Dsui_3372 at 3613.638 kb on - strand, within Dsui_3372 at 3613.669 kb on - strand, within Dsui_3372 at 3613.669 kb on - strand, within Dsui_3372 at 3614.105 kb on + strand, within Dsui_3372 at 3614.113 kb on - strand, within Dsui_3372 at 3614.113 kb on - strand, within Dsui_3372 at 3614.170 kb on - strand at 3614.335 kb on + strand, within Dsui_3372 at 3614.438 kb on - strand, within Dsui_3372 at 3614.545 kb on + strand, within Dsui_3372 at 3614.717 kb on - strand, within Dsui_3372 at 3614.834 kb on - strand, within Dsui_3372 at 3614.889 kb on - strand, within Dsui_3372 at 3615.028 kb on - strand, within Dsui_3372 at 3615.029 kb on - strand at 3615.096 kb on - strand, within Dsui_3372 at 3615.120 kb on + strand, within Dsui_3372 at 3615.162 kb on + strand, within Dsui_3372 at 3615.288 kb on + strand at 3615.304 kb on + strand at 3615.379 kb on - strand at 3615.514 kb on + strand at 3615.573 kb on + strand at 3615.775 kb on + strand, within Dsui_3373 at 3615.807 kb on + strand, within Dsui_3373 at 3615.844 kb on + strand, within Dsui_3373 at 3616.024 kb on + strand, within Dsui_3373 at 3616.102 kb on + strand at 3616.241 kb on + strand, within Dsui_3373 at 3616.260 kb on + strand, within Dsui_3373 at 3616.327 kb on + strand, within Dsui_3373
Per-strain Table
Position Strand Gene LocusTag Fraction spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 3,612,483 + Dsui_3371 0.41 +0.3 3,612,491 - Dsui_3371 0.41 -0.1 3,612,498 + +0.1 3,612,498 + Dsui_3371 0.42 -0.0 3,612,506 - Dsui_3371 0.43 +0.7 3,612,557 + Dsui_3371 0.48 -0.2 3,612,570 + -2.6 3,612,623 - Dsui_3371 0.54 -0.2 3,612,624 + Dsui_3371 0.54 +0.0 3,612,652 - Dsui_3371 0.57 +2.4 3,612,710 + -0.3 3,612,718 - Dsui_3371 0.63 +0.0 3,612,729 + -2.8 3,612,955 - Dsui_3371 0.85 +1.0 3,613,043 - +1.6 3,613,101 + -3.2 3,613,109 - -0.0 3,613,121 - +0.9 3,613,124 - +0.6 3,613,156 + +0.6 3,613,156 + +1.5 3,613,164 - +2.9 3,613,164 - +3.2 3,613,164 - +2.2 3,613,164 - +2.4 3,613,164 - +4.3 3,613,218 + +1.8 3,613,269 + +6.1 3,613,398 - +6.4 3,613,436 - +4.9 3,613,438 + +5.2 3,613,470 + +4.9 3,613,526 + Dsui_3372 0.12 +5.3 3,613,627 - Dsui_3372 0.17 +4.1 3,613,638 - Dsui_3372 0.18 +4.9 3,613,669 - Dsui_3372 0.19 +5.1 3,613,669 - Dsui_3372 0.19 +5.9 3,614,105 + Dsui_3372 0.39 +6.3 3,614,113 - Dsui_3372 0.40 +5.6 3,614,113 - Dsui_3372 0.40 +5.1 3,614,170 - +6.5 3,614,335 + Dsui_3372 0.50 +5.9 3,614,438 - Dsui_3372 0.55 +4.4 3,614,545 + Dsui_3372 0.60 +6.8 3,614,717 - Dsui_3372 0.68 +4.7 3,614,834 - Dsui_3372 0.73 +5.5 3,614,889 - Dsui_3372 0.76 +4.5 3,615,028 - Dsui_3372 0.82 +7.1 3,615,029 - +5.0 3,615,096 - Dsui_3372 0.86 +3.4 3,615,120 + Dsui_3372 0.87 +6.0 3,615,162 + Dsui_3372 0.89 +5.6 3,615,288 + +5.1 3,615,304 + +6.4 3,615,379 - +0.4 3,615,514 + -0.2 3,615,573 + +1.8 3,615,775 + Dsui_3373 0.21 +0.6 3,615,807 + Dsui_3373 0.23 +0.4 3,615,844 + Dsui_3373 0.25 +1.2 3,616,024 + Dsui_3373 0.36 +0.2 3,616,102 + +0.1 3,616,241 + Dsui_3373 0.48 -0.1 3,616,260 + Dsui_3373 0.49 +0.4 3,616,327 + Dsui_3373 0.53 -1.4
Or see this region's nucleotide sequence