Experiment: spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2504 and Dsui_2505 overlap by 17 nucleotides Dsui_2505 and Dsui_2506 are separated by 93 nucleotides Dsui_2506 and Dsui_2507 are separated by 344 nucleotides
Dsui_2504: Dsui_2504 - hypothetical protein, at 2,652,167 to 2,652,547
_2504
Dsui_2505: Dsui_2505 - putative transcriptional regulator, at 2,652,531 to 2,652,830
_2505
Dsui_2506: Dsui_2506 - transposase, IS30 family, at 2,652,924 to 2,654,084
_2506
Dsui_2507: Dsui_2507 - hypothetical protein, at 2,654,429 to 2,654,695
_2507
Position (kb)
2652
2653
2654
2655 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2651.945 kb on + strand at 2651.945 kb on + strand at 2651.965 kb on - strand at 2652.015 kb on + strand at 2652.015 kb on - strand at 2652.041 kb on + strand at 2652.206 kb on + strand, within Dsui_2504 at 2652.278 kb on + strand, within Dsui_2504 at 2652.314 kb on - strand at 2652.417 kb on + strand, within Dsui_2504 at 2652.443 kb on + strand, within Dsui_2504 at 2652.462 kb on + strand, within Dsui_2504 at 2652.470 kb on - strand, within Dsui_2504 at 2652.495 kb on - strand at 2652.495 kb on - strand, within Dsui_2504 at 2652.495 kb on - strand, within Dsui_2504 at 2652.956 kb on - strand at 2654.110 kb on + strand at 2654.110 kb on + strand at 2654.112 kb on + strand at 2654.112 kb on + strand at 2654.133 kb on + strand at 2654.146 kb on + strand at 2654.146 kb on + strand at 2654.150 kb on + strand at 2654.201 kb on + strand at 2654.201 kb on + strand at 2654.201 kb on + strand at 2654.236 kb on + strand at 2654.254 kb on + strand at 2654.254 kb on + strand at 2654.264 kb on + strand at 2654.310 kb on + strand at 2654.318 kb on + strand at 2654.348 kb on + strand at 2654.357 kb on + strand at 2654.362 kb on + strand at 2654.362 kb on + strand at 2654.362 kb on + strand at 2654.362 kb on + strand at 2654.362 kb on + strand at 2654.370 kb on - strand at 2654.375 kb on + strand at 2654.375 kb on + strand at 2654.375 kb on + strand at 2654.375 kb on + strand at 2654.375 kb on + strand at 2654.375 kb on + strand at 2654.375 kb on + strand at 2654.375 kb on + strand at 2654.375 kb on + strand at 2654.375 kb on + strand at 2654.375 kb on + strand at 2654.375 kb on + strand at 2654.375 kb on + strand at 2654.382 kb on + strand at 2654.390 kb on + strand at 2654.390 kb on + strand at 2654.398 kb on + strand at 2654.400 kb on + strand at 2654.408 kb on - strand at 2654.421 kb on + strand at 2654.421 kb on + strand at 2654.421 kb on + strand at 2654.421 kb on + strand at 2654.426 kb on + strand at 2654.426 kb on + strand at 2654.426 kb on + strand at 2654.431 kb on + strand at 2654.457 kb on + strand, within Dsui_2507 at 2654.472 kb on + strand, within Dsui_2507 at 2654.472 kb on + strand, within Dsui_2507 at 2654.472 kb on + strand, within Dsui_2507 at 2654.472 kb on + strand, within Dsui_2507 at 2654.472 kb on + strand, within Dsui_2507 at 2654.472 kb on + strand, within Dsui_2507 at 2654.472 kb on + strand, within Dsui_2507 at 2654.472 kb on + strand, within Dsui_2507 at 2654.472 kb on + strand, within Dsui_2507 at 2654.475 kb on - strand, within Dsui_2507 at 2654.480 kb on - strand at 2654.480 kb on - strand, within Dsui_2507 at 2654.480 kb on - strand, within Dsui_2507 at 2654.489 kb on + strand, within Dsui_2507 at 2654.489 kb on + strand, within Dsui_2507 at 2654.489 kb on + strand, within Dsui_2507 at 2654.490 kb on + strand, within Dsui_2507 at 2654.492 kb on + strand, within Dsui_2507 at 2654.499 kb on + strand, within Dsui_2507 at 2654.500 kb on + strand, within Dsui_2507 at 2654.500 kb on + strand, within Dsui_2507 at 2654.521 kb on + strand, within Dsui_2507 at 2654.521 kb on + strand, within Dsui_2507 at 2654.522 kb on - strand, within Dsui_2507 at 2654.530 kb on + strand, within Dsui_2507 at 2654.532 kb on + strand, within Dsui_2507 at 2654.532 kb on + strand, within Dsui_2507 at 2654.542 kb on + strand, within Dsui_2507 at 2654.542 kb on + strand, within Dsui_2507 at 2654.542 kb on + strand, within Dsui_2507 at 2654.542 kb on + strand, within Dsui_2507 at 2654.542 kb on + strand, within Dsui_2507 at 2654.542 kb on + strand, within Dsui_2507 at 2654.542 kb on + strand, within Dsui_2507 at 2654.543 kb on + strand, within Dsui_2507 at 2654.543 kb on + strand, within Dsui_2507 at 2654.544 kb on + strand, within Dsui_2507 at 2654.550 kb on - strand at 2654.554 kb on + strand, within Dsui_2507 at 2654.554 kb on + strand, within Dsui_2507 at 2654.554 kb on + strand, within Dsui_2507 at 2654.568 kb on + strand, within Dsui_2507 at 2654.569 kb on + strand, within Dsui_2507 at 2654.576 kb on + strand, within Dsui_2507 at 2654.576 kb on + strand, within Dsui_2507 at 2654.576 kb on + strand, within Dsui_2507 at 2654.591 kb on + strand, within Dsui_2507 at 2654.591 kb on + strand, within Dsui_2507 at 2654.598 kb on + strand, within Dsui_2507 at 2654.605 kb on + strand, within Dsui_2507 at 2654.605 kb on + strand, within Dsui_2507 at 2654.615 kb on + strand, within Dsui_2507 at 2654.617 kb on + strand, within Dsui_2507 at 2654.617 kb on + strand, within Dsui_2507 at 2654.622 kb on + strand, within Dsui_2507 at 2654.622 kb on + strand, within Dsui_2507 at 2654.622 kb on + strand, within Dsui_2507 at 2654.622 kb on + strand, within Dsui_2507 at 2654.622 kb on + strand, within Dsui_2507 at 2654.625 kb on - strand at 2654.630 kb on - strand, within Dsui_2507 at 2654.642 kb on + strand, within Dsui_2507 at 2654.649 kb on + strand, within Dsui_2507 at 2654.649 kb on + strand, within Dsui_2507 at 2654.649 kb on + strand, within Dsui_2507 at 2654.651 kb on + strand, within Dsui_2507 at 2654.680 kb on + strand at 2654.680 kb on + strand at 2654.680 kb on + strand at 2654.690 kb on - strand at 2654.706 kb on + strand at 2654.714 kb on - strand at 2654.714 kb on - strand at 2654.731 kb on - strand at 2654.758 kb on + strand at 2654.769 kb on + strand at 2654.777 kb on - strand at 2654.782 kb on - strand at 2654.782 kb on - strand at 2654.784 kb on + strand at 2654.784 kb on + strand at 2654.784 kb on + strand at 2654.784 kb on + strand at 2654.797 kb on + strand at 2654.805 kb on - strand at 2654.806 kb on + strand at 2654.819 kb on - strand at 2654.828 kb on - strand at 2654.835 kb on - strand at 2654.837 kb on + strand at 2654.837 kb on + strand at 2654.842 kb on + strand at 2654.842 kb on + strand at 2654.843 kb on + strand at 2654.844 kb on + strand at 2654.844 kb on + strand at 2654.844 kb on + strand at 2654.848 kb on + strand at 2654.848 kb on + strand at 2654.851 kb on - strand at 2654.851 kb on - strand at 2654.851 kb on - strand at 2654.858 kb on - strand at 2654.876 kb on + strand at 2654.876 kb on + strand at 2654.876 kb on + strand at 2654.876 kb on + strand at 2654.876 kb on + strand at 2654.876 kb on + strand at 2654.876 kb on + strand at 2654.876 kb on + strand at 2654.876 kb on + strand at 2654.881 kb on + strand at 2654.881 kb on + strand at 2654.881 kb on + strand at 2654.881 kb on + strand at 2654.882 kb on + strand at 2654.884 kb on - strand at 2654.884 kb on - strand at 2654.884 kb on - strand at 2654.884 kb on - strand at 2654.884 kb on - strand at 2654.884 kb on - strand at 2654.889 kb on + strand at 2654.889 kb on + strand at 2654.889 kb on + strand at 2654.889 kb on - strand at 2654.890 kb on - strand at 2654.890 kb on - strand at 2654.892 kb on + strand at 2654.894 kb on - strand at 2654.900 kb on - strand at 2654.902 kb on + strand at 2654.902 kb on + strand at 2654.903 kb on + strand at 2654.903 kb on + strand at 2654.903 kb on + strand at 2654.903 kb on + strand at 2654.910 kb on - strand at 2654.911 kb on - strand at 2654.911 kb on - strand at 2654.970 kb on + strand at 2654.970 kb on + strand at 2654.970 kb on + strand at 2654.970 kb on + strand at 2654.970 kb on + strand at 2654.970 kb on + strand at 2654.978 kb on - strand at 2654.978 kb on - strand at 2654.978 kb on - strand at 2654.978 kb on - strand at 2654.978 kb on - strand at 2654.978 kb on - strand at 2654.978 kb on - strand at 2654.978 kb on - strand at 2654.978 kb on - strand at 2654.978 kb on - strand at 2654.978 kb on - strand at 2654.980 kb on + strand at 2654.986 kb on - strand at 2654.994 kb on + strand at 2654.995 kb on - strand at 2654.995 kb on - strand at 2655.003 kb on - strand at 2655.060 kb on + strand at 2655.063 kb on + strand at 2655.068 kb on - strand at 2655.068 kb on - strand at 2655.068 kb on - strand at 2655.068 kb on - strand at 2655.077 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 2,651,945 + -1.8 2,651,945 + -1.0 2,651,965 - -0.2 2,652,015 + -3.5 2,652,015 - -0.5 2,652,041 + -2.1 2,652,206 + Dsui_2504 0.10 +0.8 2,652,278 + Dsui_2504 0.29 +1.2 2,652,314 - -0.9 2,652,417 + Dsui_2504 0.66 +1.2 2,652,443 + Dsui_2504 0.72 +0.7 2,652,462 + Dsui_2504 0.77 -1.7 2,652,470 - Dsui_2504 0.80 -0.8 2,652,495 - -1.8 2,652,495 - Dsui_2504 0.86 -3.8 2,652,495 - Dsui_2504 0.86 -2.6 2,652,956 - -0.0 2,654,110 + -0.6 2,654,110 + -2.7 2,654,112 + -0.5 2,654,112 + -0.4 2,654,133 + -0.4 2,654,146 + +1.5 2,654,146 + +1.2 2,654,150 + +1.2 2,654,201 + +1.6 2,654,201 + -1.1 2,654,201 + -0.7 2,654,236 + -1.8 2,654,254 + -0.2 2,654,254 + -0.9 2,654,264 + -1.0 2,654,310 + +0.2 2,654,318 + -3.3 2,654,348 + +1.0 2,654,357 + +0.3 2,654,362 + +0.9 2,654,362 + +2.1 2,654,362 + +1.0 2,654,362 + -1.2 2,654,362 + +1.0 2,654,370 - -1.7 2,654,375 + -0.0 2,654,375 + +1.3 2,654,375 + +1.2 2,654,375 + +0.8 2,654,375 + -1.3 2,654,375 + +1.2 2,654,375 + +1.1 2,654,375 + +1.3 2,654,375 + +0.7 2,654,375 + +0.7 2,654,375 + +0.9 2,654,375 + +0.7 2,654,375 + +0.2 2,654,382 + +1.0 2,654,390 + +0.2 2,654,390 + +1.0 2,654,398 + +0.4 2,654,400 + +1.1 2,654,408 - -1.9 2,654,421 + +1.3 2,654,421 + -0.7 2,654,421 + +1.6 2,654,421 + +0.3 2,654,426 + +1.0 2,654,426 + +0.5 2,654,426 + +0.3 2,654,431 + +1.3 2,654,457 + Dsui_2507 0.10 -0.0 2,654,472 + Dsui_2507 0.16 +0.5 2,654,472 + Dsui_2507 0.16 +0.8 2,654,472 + Dsui_2507 0.16 +0.1 2,654,472 + Dsui_2507 0.16 +1.1 2,654,472 + Dsui_2507 0.16 +0.1 2,654,472 + Dsui_2507 0.16 +1.0 2,654,472 + Dsui_2507 0.16 +1.2 2,654,472 + Dsui_2507 0.16 +1.1 2,654,472 + Dsui_2507 0.16 +0.7 2,654,475 - Dsui_2507 0.17 -0.1 2,654,480 - -2.1 2,654,480 - Dsui_2507 0.19 -3.5 2,654,480 - Dsui_2507 0.19 -2.0 2,654,489 + Dsui_2507 0.22 +0.5 2,654,489 + Dsui_2507 0.22 +1.3 2,654,489 + Dsui_2507 0.22 +1.0 2,654,490 + Dsui_2507 0.23 +0.9 2,654,492 + Dsui_2507 0.24 +0.5 2,654,499 + Dsui_2507 0.26 -1.8 2,654,500 + Dsui_2507 0.27 +1.1 2,654,500 + Dsui_2507 0.27 +0.6 2,654,521 + Dsui_2507 0.34 +1.2 2,654,521 + Dsui_2507 0.34 +0.5 2,654,522 - Dsui_2507 0.35 +0.6 2,654,530 + Dsui_2507 0.38 +2.8 2,654,532 + Dsui_2507 0.39 +0.9 2,654,532 + Dsui_2507 0.39 +0.3 2,654,542 + Dsui_2507 0.42 +0.2 2,654,542 + Dsui_2507 0.42 +1.7 2,654,542 + Dsui_2507 0.42 +0.8 2,654,542 + Dsui_2507 0.42 +2.7 2,654,542 + Dsui_2507 0.42 +0.6 2,654,542 + Dsui_2507 0.42 +0.8 2,654,542 + Dsui_2507 0.42 +0.2 2,654,543 + Dsui_2507 0.43 +0.6 2,654,543 + Dsui_2507 0.43 +0.7 2,654,544 + Dsui_2507 0.43 +0.6 2,654,550 - -2.4 2,654,554 + Dsui_2507 0.47 +1.2 2,654,554 + Dsui_2507 0.47 +0.9 2,654,554 + Dsui_2507 0.47 +1.3 2,654,568 + Dsui_2507 0.52 +0.1 2,654,569 + Dsui_2507 0.52 +0.2 2,654,576 + Dsui_2507 0.55 +1.2 2,654,576 + Dsui_2507 0.55 +1.1 2,654,576 + Dsui_2507 0.55 -1.2 2,654,591 + Dsui_2507 0.61 +0.2 2,654,591 + Dsui_2507 0.61 +1.1 2,654,598 + Dsui_2507 0.63 -0.2 2,654,605 + Dsui_2507 0.66 +1.2 2,654,605 + Dsui_2507 0.66 +1.4 2,654,615 + Dsui_2507 0.70 +2.5 2,654,617 + Dsui_2507 0.70 +1.5 2,654,617 + Dsui_2507 0.70 +0.7 2,654,622 + Dsui_2507 0.72 +0.9 2,654,622 + Dsui_2507 0.72 +1.1 2,654,622 + Dsui_2507 0.72 +0.5 2,654,622 + Dsui_2507 0.72 +0.9 2,654,622 + Dsui_2507 0.72 +0.8 2,654,625 - -0.5 2,654,630 - Dsui_2507 0.75 -1.9 2,654,642 + Dsui_2507 0.80 -0.5 2,654,649 + Dsui_2507 0.82 +0.6 2,654,649 + Dsui_2507 0.82 +0.4 2,654,649 + Dsui_2507 0.82 +0.8 2,654,651 + Dsui_2507 0.83 +2.7 2,654,680 + +0.8 2,654,680 + +2.7 2,654,680 + +1.2 2,654,690 - -2.6 2,654,706 + +1.0 2,654,714 - +0.5 2,654,714 - +0.1 2,654,731 - -1.7 2,654,758 + +1.1 2,654,769 + +1.5 2,654,777 - +1.8 2,654,782 - -3.7 2,654,782 - -1.4 2,654,784 + +0.4 2,654,784 + -1.1 2,654,784 + +0.5 2,654,784 + +0.2 2,654,797 + +1.0 2,654,805 - -2.9 2,654,806 + +0.3 2,654,819 - +1.5 2,654,828 - -1.5 2,654,835 - +2.4 2,654,837 + +0.1 2,654,837 + +0.2 2,654,842 + +1.6 2,654,842 + +0.9 2,654,843 + +1.6 2,654,844 + +0.9 2,654,844 + +1.1 2,654,844 + +0.4 2,654,848 + +0.5 2,654,848 + -0.5 2,654,851 - -3.3 2,654,851 - -0.8 2,654,851 - -1.5 2,654,858 - -1.5 2,654,876 + -1.1 2,654,876 + +0.7 2,654,876 + +1.7 2,654,876 + +1.6 2,654,876 + +1.0 2,654,876 + +0.3 2,654,876 + -0.3 2,654,876 + +1.4 2,654,876 + +0.4 2,654,881 + -2.2 2,654,881 + +0.6 2,654,881 + +1.8 2,654,881 + +0.0 2,654,882 + +0.6 2,654,884 - -0.4 2,654,884 - -4.1 2,654,884 - -1.0 2,654,884 - -0.5 2,654,884 - +0.8 2,654,884 - -0.9 2,654,889 + +1.9 2,654,889 + -0.3 2,654,889 + +0.1 2,654,889 - -4.0 2,654,890 - -0.5 2,654,890 - +1.9 2,654,892 + +1.8 2,654,894 - +1.4 2,654,900 - -0.7 2,654,902 + +0.8 2,654,902 + +0.5 2,654,903 + +0.2 2,654,903 + +1.0 2,654,903 + +0.4 2,654,903 + -0.3 2,654,910 - -3.2 2,654,911 - -2.4 2,654,911 - +0.6 2,654,970 + +1.1 2,654,970 + +0.1 2,654,970 + +1.4 2,654,970 + +0.6 2,654,970 + +0.4 2,654,970 + +1.0 2,654,978 - +1.5 2,654,978 - -2.7 2,654,978 - -0.2 2,654,978 - +0.8 2,654,978 - -4.0 2,654,978 - -3.6 2,654,978 - -0.2 2,654,978 - -4.3 2,654,978 - -2.8 2,654,978 - -1.1 2,654,978 - +0.9 2,654,980 + +0.6 2,654,986 - -2.6 2,654,994 + +0.8 2,654,995 - +0.7 2,654,995 - -0.6 2,655,003 - -2.4 2,655,060 + -0.4 2,655,063 + +1.1 2,655,068 - -3.3 2,655,068 - +2.8 2,655,068 - -0.4 2,655,068 - -0.9 2,655,077 - +0.3
Or see this region's nucleotide sequence