Strain Fitness in Dechlorosoma suillum PS around Dsui_2486

Experiment: spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2484 and Dsui_2485 are separated by 33 nucleotidesDsui_2485 and Dsui_2486 overlap by 4 nucleotidesDsui_2486 and Dsui_2487 are separated by 159 nucleotides Dsui_2484: Dsui_2484 - hydroxyacylglutathione hydrolase, at 2,633,740 to 2,634,543 _2484 Dsui_2485: Dsui_2485 - response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain, at 2,634,577 to 2,634,942 _2485 Dsui_2486: Dsui_2486 - diguanylate cyclase (GGDEF) domain-containing protein, at 2,634,939 to 2,635,901 _2486 Dsui_2487: Dsui_2487 - hypothetical protein, at 2,636,061 to 2,637,569 _2487 Position (kb) 2634 2635 2636Strain fitness (log2 ratio) -3 -2 -1 0 1at 2634.129 kb on + strand, within Dsui_2484at 2634.142 kb on + strand, within Dsui_2484at 2634.379 kb on - strand, within Dsui_2484at 2634.404 kb on + strand, within Dsui_2484at 2634.515 kb on + strandat 2634.537 kb on + strandat 2634.611 kb on + strandat 2634.656 kb on - strand, within Dsui_2485at 2634.659 kb on + strand, within Dsui_2485at 2634.708 kb on + strand, within Dsui_2485at 2634.716 kb on - strand, within Dsui_2485at 2634.740 kb on - strand, within Dsui_2485at 2634.779 kb on - strand, within Dsui_2485at 2635.082 kb on + strand, within Dsui_2486at 2635.261 kb on + strand, within Dsui_2486at 2635.308 kb on - strand, within Dsui_2486at 2635.313 kb on - strand, within Dsui_2486at 2635.493 kb on + strand, within Dsui_2486at 2635.517 kb on + strand, within Dsui_2486at 2635.550 kb on - strand, within Dsui_2486at 2635.602 kb on + strand, within Dsui_2486at 2635.726 kb on - strand, within Dsui_2486at 2635.728 kb on - strand, within Dsui_2486at 2635.765 kb on - strand, within Dsui_2486at 2635.785 kb on - strand, within Dsui_2486at 2635.812 kb on - strandat 2635.869 kb on + strandat 2635.878 kb on - strandat 2635.894 kb on - strandat 2635.924 kb on - strandat 2636.102 kb on + strandat 2636.281 kb on + strand, within Dsui_2487at 2636.298 kb on + strand, within Dsui_2487at 2636.351 kb on + strand, within Dsui_2487at 2636.359 kb on - strand, within Dsui_2487at 2636.366 kb on + strand, within Dsui_2487at 2636.519 kb on + strand, within Dsui_2487at 2636.559 kb on + strand, within Dsui_2487at 2636.651 kb on + strand, within Dsui_2487at 2636.659 kb on - strandat 2636.683 kb on + strand, within Dsui_2487at 2636.683 kb on + strand, within Dsui_2487at 2636.728 kb on + strand, within Dsui_2487

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Per-strain Table

Position Strand Gene LocusTag Fraction spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
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2,634,129 + Dsui_2484 0.48 -0.6
2,634,142 + Dsui_2484 0.50 -3.4
2,634,379 - Dsui_2484 0.79 -0.5
2,634,404 + Dsui_2484 0.83 +0.6
2,634,515 + +0.6
2,634,537 + +0.6
2,634,611 + +0.9
2,634,656 - Dsui_2485 0.22 +0.8
2,634,659 + Dsui_2485 0.22 -0.6
2,634,708 + Dsui_2485 0.36 +0.4
2,634,716 - Dsui_2485 0.38 -0.0
2,634,740 - Dsui_2485 0.45 +0.4
2,634,779 - Dsui_2485 0.55 +0.6
2,635,082 + Dsui_2486 0.15 -0.9
2,635,261 + Dsui_2486 0.33 -0.5
2,635,308 - Dsui_2486 0.38 -0.8
2,635,313 - Dsui_2486 0.39 -0.4
2,635,493 + Dsui_2486 0.58 -1.6
2,635,517 + Dsui_2486 0.60 -2.5
2,635,550 - Dsui_2486 0.63 -0.4
2,635,602 + Dsui_2486 0.69 -3.3
2,635,726 - Dsui_2486 0.82 -0.1
2,635,728 - Dsui_2486 0.82 -0.1
2,635,765 - Dsui_2486 0.86 +0.0
2,635,785 - Dsui_2486 0.88 -0.7
2,635,812 - +1.3
2,635,869 + -2.5
2,635,878 - -0.0
2,635,894 - +1.1
2,635,924 - -0.4
2,636,102 + -0.2
2,636,281 + Dsui_2487 0.15 -3.2
2,636,298 + Dsui_2487 0.16 -0.4
2,636,351 + Dsui_2487 0.19 +0.5
2,636,359 - Dsui_2487 0.20 +0.8
2,636,366 + Dsui_2487 0.20 +1.3
2,636,519 + Dsui_2487 0.30 +1.2
2,636,559 + Dsui_2487 0.33 +0.1
2,636,651 + Dsui_2487 0.39 +0.7
2,636,659 - -0.8
2,636,683 + Dsui_2487 0.41 +0.2
2,636,683 + Dsui_2487 0.41 +0.3
2,636,728 + Dsui_2487 0.44 -0.1

Or see this region's nucleotide sequence