Experiment: spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2296 and Dsui_2297 are separated by 158 nucleotides Dsui_2297 and Dsui_2298 are separated by 65 nucleotides Dsui_2298 and Dsui_2299 are separated by 114 nucleotides
Dsui_2296: Dsui_2296 - chemotaxis protein, at 2,450,148 to 2,450,747
_2296
Dsui_2297: Dsui_2297 - acetoacetyl-CoA synthase, at 2,450,906 to 2,452,876
_2297
Dsui_2298: Dsui_2298 - putative thioesterase, at 2,452,942 to 2,453,352
_2298
Dsui_2299: Dsui_2299 - flavin-dependent dehydrogenase, at 2,453,467 to 2,455,113
_2299
Position (kb)
2450
2451
2452
2453 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2450.150 kb on - strand at 2450.187 kb on + strand at 2450.214 kb on + strand, within Dsui_2296 at 2450.420 kb on + strand, within Dsui_2296 at 2450.487 kb on + strand, within Dsui_2296 at 2450.563 kb on + strand, within Dsui_2296 at 2450.674 kb on - strand at 2450.741 kb on + strand at 2450.839 kb on - strand at 2450.938 kb on + strand at 2450.992 kb on + strand at 2450.992 kb on - strand at 2451.061 kb on - strand at 2451.139 kb on + strand, within Dsui_2297 at 2451.139 kb on + strand, within Dsui_2297 at 2451.407 kb on + strand at 2451.437 kb on + strand, within Dsui_2297 at 2451.528 kb on + strand, within Dsui_2297 at 2451.563 kb on + strand, within Dsui_2297 at 2451.574 kb on + strand, within Dsui_2297 at 2451.789 kb on - strand, within Dsui_2297 at 2451.797 kb on - strand, within Dsui_2297 at 2451.797 kb on - strand at 2451.814 kb on - strand, within Dsui_2297 at 2451.834 kb on + strand, within Dsui_2297 at 2451.919 kb on - strand, within Dsui_2297 at 2452.082 kb on + strand at 2452.196 kb on - strand, within Dsui_2297 at 2452.267 kb on - strand, within Dsui_2297 at 2452.274 kb on - strand, within Dsui_2297 at 2452.518 kb on + strand at 2452.687 kb on - strand at 2452.721 kb on - strand at 2452.905 kb on + strand at 2452.918 kb on - strand at 2452.929 kb on - strand at 2452.947 kb on - strand at 2453.167 kb on - strand, within Dsui_2298 at 2453.199 kb on + strand, within Dsui_2298 at 2453.207 kb on + strand at 2453.212 kb on + strand, within Dsui_2298 at 2453.215 kb on - strand, within Dsui_2298 at 2453.244 kb on + strand, within Dsui_2298 at 2453.265 kb on - strand, within Dsui_2298 at 2453.272 kb on + strand, within Dsui_2298 at 2453.275 kb on - strand, within Dsui_2298 at 2453.368 kb on + strand at 2453.368 kb on + strand at 2453.368 kb on + strand at 2453.376 kb on - strand at 2453.376 kb on - strand at 2453.645 kb on - strand at 2453.650 kb on + strand, within Dsui_2299 at 2453.653 kb on - strand, within Dsui_2299 at 2453.828 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 2,450,150 - -1.9 2,450,187 + +0.7 2,450,214 + Dsui_2296 0.11 +0.3 2,450,420 + Dsui_2296 0.45 +0.8 2,450,487 + Dsui_2296 0.56 -0.1 2,450,563 + Dsui_2296 0.69 +0.3 2,450,674 - -0.0 2,450,741 + +0.9 2,450,839 - -1.3 2,450,938 + -0.2 2,450,992 + +0.1 2,450,992 - +0.7 2,451,061 - -2.9 2,451,139 + Dsui_2297 0.12 +0.2 2,451,139 + Dsui_2297 0.12 +1.1 2,451,407 + -1.6 2,451,437 + Dsui_2297 0.27 -0.9 2,451,528 + Dsui_2297 0.32 +0.7 2,451,563 + Dsui_2297 0.33 -3.9 2,451,574 + Dsui_2297 0.34 -2.2 2,451,789 - Dsui_2297 0.45 -0.1 2,451,797 - Dsui_2297 0.45 +0.4 2,451,797 - -2.5 2,451,814 - Dsui_2297 0.46 +0.3 2,451,834 + Dsui_2297 0.47 -0.3 2,451,919 - Dsui_2297 0.51 -0.8 2,452,082 + -1.3 2,452,196 - Dsui_2297 0.65 -1.6 2,452,267 - Dsui_2297 0.69 -1.0 2,452,274 - Dsui_2297 0.69 -0.5 2,452,518 + +1.0 2,452,687 - -3.5 2,452,721 - +1.1 2,452,905 + -0.6 2,452,918 - -0.3 2,452,929 - -0.2 2,452,947 - -0.3 2,453,167 - Dsui_2298 0.55 -0.6 2,453,199 + Dsui_2298 0.63 -0.8 2,453,207 + -2.3 2,453,212 + Dsui_2298 0.66 -4.0 2,453,215 - Dsui_2298 0.66 +2.2 2,453,244 + Dsui_2298 0.73 -2.3 2,453,265 - Dsui_2298 0.79 -0.3 2,453,272 + Dsui_2298 0.80 -3.0 2,453,275 - Dsui_2298 0.81 -0.3 2,453,368 + -0.7 2,453,368 + +0.7 2,453,368 + +0.3 2,453,376 - +0.7 2,453,376 - +0.4 2,453,645 - -1.6 2,453,650 + Dsui_2299 0.11 -0.1 2,453,653 - Dsui_2299 0.11 -1.7 2,453,828 - +0.3
Or see this region's nucleotide sequence