Experiment: spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1756 and Dsui_1757 are separated by 137 nucleotides Dsui_1757 and Dsui_1758 are separated by 7 nucleotides
Dsui_1756: Dsui_1756 - flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF, at 1,842,313 to 1,844,064
_1756
Dsui_1757: Dsui_1757 - signal transduction histidine kinase, at 1,844,202 to 1,845,407
_1757
Dsui_1758: Dsui_1758 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 1,845,415 to 1,846,839
_1758
Position (kb)
1844
1845
1846 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3
4
5 at 1843.300 kb on + strand, within Dsui_1756 at 1843.336 kb on + strand, within Dsui_1756 at 1843.373 kb on + strand, within Dsui_1756 at 1843.469 kb on - strand, within Dsui_1756 at 1843.472 kb on - strand, within Dsui_1756 at 1843.490 kb on + strand, within Dsui_1756 at 1843.494 kb on + strand, within Dsui_1756 at 1843.558 kb on - strand, within Dsui_1756 at 1843.588 kb on - strand, within Dsui_1756 at 1843.598 kb on + strand, within Dsui_1756 at 1843.631 kb on - strand, within Dsui_1756 at 1843.692 kb on + strand, within Dsui_1756 at 1843.802 kb on - strand, within Dsui_1756 at 1843.811 kb on + strand, within Dsui_1756 at 1843.811 kb on + strand, within Dsui_1756 at 1843.821 kb on + strand, within Dsui_1756 at 1843.829 kb on - strand, within Dsui_1756 at 1843.878 kb on - strand, within Dsui_1756 at 1843.913 kb on - strand at 1843.946 kb on + strand at 1843.981 kb on + strand at 1843.981 kb on + strand at 1843.981 kb on + strand at 1843.981 kb on + strand at 1843.981 kb on + strand at 1843.989 kb on - strand at 1844.043 kb on - strand at 1844.045 kb on - strand at 1844.055 kb on - strand at 1844.055 kb on - strand at 1844.074 kb on - strand at 1844.097 kb on + strand at 1844.097 kb on - strand at 1844.105 kb on - strand at 1844.112 kb on + strand at 1844.112 kb on + strand at 1844.112 kb on + strand at 1844.120 kb on - strand at 1844.120 kb on - strand at 1844.184 kb on + strand at 1844.184 kb on + strand at 1844.216 kb on + strand at 1844.216 kb on + strand at 1844.226 kb on + strand at 1844.257 kb on - strand at 1844.309 kb on + strand at 1844.408 kb on + strand, within Dsui_1757 at 1844.408 kb on + strand, within Dsui_1757 at 1844.429 kb on + strand, within Dsui_1757 at 1844.437 kb on - strand, within Dsui_1757 at 1844.457 kb on + strand, within Dsui_1757 at 1844.467 kb on - strand at 1844.515 kb on + strand, within Dsui_1757 at 1844.529 kb on + strand, within Dsui_1757 at 1844.583 kb on + strand, within Dsui_1757 at 1844.628 kb on + strand, within Dsui_1757 at 1844.674 kb on + strand, within Dsui_1757 at 1844.693 kb on + strand, within Dsui_1757 at 1844.730 kb on + strand, within Dsui_1757 at 1844.752 kb on + strand, within Dsui_1757 at 1844.784 kb on + strand, within Dsui_1757 at 1844.799 kb on + strand, within Dsui_1757 at 1844.913 kb on + strand, within Dsui_1757 at 1844.974 kb on + strand, within Dsui_1757 at 1844.982 kb on + strand, within Dsui_1757 at 1845.020 kb on + strand, within Dsui_1757 at 1845.054 kb on + strand, within Dsui_1757 at 1845.059 kb on + strand, within Dsui_1757 at 1845.061 kb on - strand at 1845.108 kb on + strand, within Dsui_1757 at 1845.108 kb on + strand, within Dsui_1757 at 1845.116 kb on - strand, within Dsui_1757 at 1845.119 kb on - strand, within Dsui_1757 at 1845.159 kb on + strand, within Dsui_1757 at 1845.438 kb on + strand at 1845.490 kb on - strand at 1845.563 kb on - strand, within Dsui_1758 at 1845.599 kb on - strand, within Dsui_1758 at 1845.602 kb on + strand, within Dsui_1758 at 1845.620 kb on - strand, within Dsui_1758 at 1845.673 kb on + strand, within Dsui_1758 at 1845.696 kb on - strand at 1845.746 kb on - strand at 1845.750 kb on + strand, within Dsui_1758 at 1845.869 kb on + strand, within Dsui_1758 at 1845.879 kb on + strand, within Dsui_1758 at 1845.899 kb on - strand at 1845.908 kb on - strand, within Dsui_1758 at 1845.969 kb on + strand, within Dsui_1758 at 1845.984 kb on + strand, within Dsui_1758 at 1846.050 kb on + strand, within Dsui_1758 at 1846.085 kb on - strand, within Dsui_1758 at 1846.256 kb on - strand, within Dsui_1758 at 1846.319 kb on + strand, within Dsui_1758 at 1846.327 kb on - strand, within Dsui_1758
Per-strain Table
Position Strand Gene LocusTag Fraction spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 1,843,300 + Dsui_1756 0.56 +0.1 1,843,336 + Dsui_1756 0.58 +0.2 1,843,373 + Dsui_1756 0.61 +0.5 1,843,469 - Dsui_1756 0.66 +0.7 1,843,472 - Dsui_1756 0.66 +0.6 1,843,490 + Dsui_1756 0.67 -0.3 1,843,494 + Dsui_1756 0.67 -0.9 1,843,558 - Dsui_1756 0.71 +0.8 1,843,588 - Dsui_1756 0.73 +0.7 1,843,598 + Dsui_1756 0.73 +0.1 1,843,631 - Dsui_1756 0.75 +1.0 1,843,692 + Dsui_1756 0.79 +0.3 1,843,802 - Dsui_1756 0.85 +1.1 1,843,811 + Dsui_1756 0.86 -0.3 1,843,811 + Dsui_1756 0.86 -1.0 1,843,821 + Dsui_1756 0.86 -0.9 1,843,829 - Dsui_1756 0.87 +0.5 1,843,878 - Dsui_1756 0.89 +1.1 1,843,913 - +0.3 1,843,946 + +0.4 1,843,981 + +1.3 1,843,981 + +0.7 1,843,981 + -0.4 1,843,981 + +1.2 1,843,981 + -0.2 1,843,989 - +0.0 1,844,043 - -3.4 1,844,045 - +1.8 1,844,055 - +0.6 1,844,055 - +1.3 1,844,074 - +0.8 1,844,097 + -3.9 1,844,097 - +1.1 1,844,105 - -0.1 1,844,112 + -0.9 1,844,112 + +2.1 1,844,112 + +0.4 1,844,120 - +0.6 1,844,120 - +1.3 1,844,184 + -0.1 1,844,184 + +0.8 1,844,216 + +0.7 1,844,216 + +0.0 1,844,226 + -1.1 1,844,257 - -2.6 1,844,309 + -4.4 1,844,408 + Dsui_1757 0.17 +0.2 1,844,408 + Dsui_1757 0.17 +0.4 1,844,429 + Dsui_1757 0.19 +0.8 1,844,437 - Dsui_1757 0.19 -3.9 1,844,457 + Dsui_1757 0.21 -1.8 1,844,467 - -3.2 1,844,515 + Dsui_1757 0.26 -2.2 1,844,529 + Dsui_1757 0.27 -2.1 1,844,583 + Dsui_1757 0.32 -1.4 1,844,628 + Dsui_1757 0.35 -2.2 1,844,674 + Dsui_1757 0.39 -0.9 1,844,693 + Dsui_1757 0.41 -3.4 1,844,730 + Dsui_1757 0.44 -1.4 1,844,752 + Dsui_1757 0.46 -1.5 1,844,784 + Dsui_1757 0.48 -1.4 1,844,799 + Dsui_1757 0.50 -1.5 1,844,913 + Dsui_1757 0.59 +0.4 1,844,974 + Dsui_1757 0.64 -0.3 1,844,982 + Dsui_1757 0.65 -0.9 1,845,020 + Dsui_1757 0.68 -4.9 1,845,054 + Dsui_1757 0.71 +0.6 1,845,059 + Dsui_1757 0.71 +0.0 1,845,061 - -2.2 1,845,108 + Dsui_1757 0.75 -0.9 1,845,108 + Dsui_1757 0.75 +1.1 1,845,116 - Dsui_1757 0.76 -5.4 1,845,119 - Dsui_1757 0.76 -2.4 1,845,159 + Dsui_1757 0.79 +1.0 1,845,438 + -0.2 1,845,490 - -2.3 1,845,563 - Dsui_1758 0.10 -0.2 1,845,599 - Dsui_1758 0.13 -3.4 1,845,602 + Dsui_1758 0.13 -0.7 1,845,620 - Dsui_1758 0.14 -1.2 1,845,673 + Dsui_1758 0.18 +0.6 1,845,696 - +0.6 1,845,746 - +2.1 1,845,750 + Dsui_1758 0.24 +1.4 1,845,869 + Dsui_1758 0.32 +0.9 1,845,879 + Dsui_1758 0.33 +1.1 1,845,899 - -2.5 1,845,908 - Dsui_1758 0.35 +0.6 1,845,969 + Dsui_1758 0.39 +4.8 1,845,984 + Dsui_1758 0.40 +0.6 1,846,050 + Dsui_1758 0.45 +1.6 1,846,085 - Dsui_1758 0.47 -1.7 1,846,256 - Dsui_1758 0.59 -1.9 1,846,319 + Dsui_1758 0.63 +0.7 1,846,327 - Dsui_1758 0.64 -1.2
Or see this region's nucleotide sequence