Experiment: spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1480 and Dsui_1481 are separated by 11 nucleotides Dsui_1481 and Dsui_1482 are separated by 711 nucleotides
Dsui_1480: Dsui_1480 - hypothetical protein, at 1,544,898 to 1,545,377
_1480
Dsui_1481: Dsui_1481 - hypothetical protein, at 1,545,389 to 1,546,507
_1481
Dsui_1482: Dsui_1482 - hypothetical protein, at 1,547,219 to 1,547,503
_1482
Position (kb)
1545
1546
1547 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1544.623 kb on - strand at 1544.623 kb on - strand at 1544.623 kb on - strand at 1544.623 kb on - strand at 1544.623 kb on - strand at 1544.623 kb on - strand at 1544.637 kb on + strand at 1544.640 kb on - strand at 1544.640 kb on - strand at 1544.669 kb on - strand at 1544.723 kb on - strand at 1544.732 kb on + strand at 1544.780 kb on - strand at 1544.874 kb on - strand at 1544.890 kb on + strand at 1544.890 kb on + strand at 1544.898 kb on - strand at 1544.898 kb on - strand at 1544.992 kb on - strand, within Dsui_1480 at 1545.009 kb on - strand, within Dsui_1480 at 1545.108 kb on - strand, within Dsui_1480 at 1545.136 kb on + strand, within Dsui_1480 at 1545.227 kb on - strand, within Dsui_1480 at 1545.243 kb on + strand, within Dsui_1480 at 1545.256 kb on - strand, within Dsui_1480 at 1545.296 kb on + strand, within Dsui_1480 at 1545.314 kb on - strand, within Dsui_1480 at 1545.333 kb on + strand at 1545.435 kb on + strand at 1545.460 kb on + strand at 1545.479 kb on + strand at 1545.575 kb on + strand, within Dsui_1481 at 1545.575 kb on + strand, within Dsui_1481 at 1545.646 kb on + strand, within Dsui_1481 at 1545.654 kb on - strand, within Dsui_1481 at 1545.654 kb on - strand, within Dsui_1481 at 1545.656 kb on + strand, within Dsui_1481 at 1545.656 kb on + strand, within Dsui_1481 at 1545.664 kb on - strand, within Dsui_1481 at 1545.664 kb on - strand, within Dsui_1481 at 1545.675 kb on + strand, within Dsui_1481 at 1545.690 kb on + strand, within Dsui_1481 at 1545.698 kb on - strand, within Dsui_1481 at 1545.698 kb on - strand, within Dsui_1481 at 1545.698 kb on - strand, within Dsui_1481 at 1545.721 kb on + strand, within Dsui_1481 at 1545.755 kb on - strand, within Dsui_1481 at 1545.755 kb on - strand, within Dsui_1481 at 1545.755 kb on - strand, within Dsui_1481 at 1545.771 kb on + strand, within Dsui_1481 at 1545.771 kb on + strand, within Dsui_1481 at 1545.779 kb on - strand, within Dsui_1481 at 1545.779 kb on - strand, within Dsui_1481 at 1545.779 kb on - strand, within Dsui_1481 at 1545.814 kb on + strand, within Dsui_1481 at 1545.837 kb on + strand at 1545.873 kb on + strand, within Dsui_1481 at 1545.881 kb on + strand, within Dsui_1481 at 1545.889 kb on - strand, within Dsui_1481 at 1545.969 kb on - strand, within Dsui_1481 at 1545.969 kb on - strand, within Dsui_1481 at 1545.976 kb on + strand, within Dsui_1481 at 1545.989 kb on + strand, within Dsui_1481 at 1546.187 kb on + strand, within Dsui_1481 at 1546.215 kb on + strand, within Dsui_1481 at 1546.216 kb on - strand, within Dsui_1481 at 1546.272 kb on - strand, within Dsui_1481 at 1546.335 kb on + strand, within Dsui_1481 at 1546.468 kb on - strand at 1546.530 kb on + strand at 1546.538 kb on - strand at 1546.588 kb on - strand at 1546.645 kb on + strand at 1546.646 kb on - strand at 1546.650 kb on + strand at 1546.652 kb on + strand at 1546.655 kb on - strand at 1546.660 kb on - strand at 1546.711 kb on - strand at 1546.773 kb on + strand at 1546.776 kb on - strand at 1546.776 kb on - strand at 1546.960 kb on + strand at 1546.960 kb on + strand at 1546.999 kb on - strand at 1547.037 kb on + strand at 1547.108 kb on + strand at 1547.241 kb on + strand at 1547.445 kb on + strand, within Dsui_1482 at 1547.453 kb on - strand, within Dsui_1482 at 1547.453 kb on - strand, within Dsui_1482 at 1547.468 kb on - strand, within Dsui_1482 at 1547.507 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 1,544,623 - -0.9 1,544,623 - -0.6 1,544,623 - -2.7 1,544,623 - +1.1 1,544,623 - +0.2 1,544,623 - +0.2 1,544,637 + -1.0 1,544,640 - +0.5 1,544,640 - -0.3 1,544,669 - +1.0 1,544,723 - +0.3 1,544,732 + +0.4 1,544,780 - +0.1 1,544,874 - +1.4 1,544,890 + -0.7 1,544,890 + -0.6 1,544,898 - +0.3 1,544,898 - -1.0 1,544,992 - Dsui_1480 0.20 +0.8 1,545,009 - Dsui_1480 0.23 +0.3 1,545,108 - Dsui_1480 0.44 -0.7 1,545,136 + Dsui_1480 0.50 -0.6 1,545,227 - Dsui_1480 0.69 +0.4 1,545,243 + Dsui_1480 0.72 -0.4 1,545,256 - Dsui_1480 0.75 -0.9 1,545,296 + Dsui_1480 0.83 +0.1 1,545,314 - Dsui_1480 0.87 +2.0 1,545,333 + +0.5 1,545,435 + +0.2 1,545,460 + -1.3 1,545,479 + +0.3 1,545,575 + Dsui_1481 0.17 -0.6 1,545,575 + Dsui_1481 0.17 -1.2 1,545,646 + Dsui_1481 0.23 +1.9 1,545,654 - Dsui_1481 0.24 +0.1 1,545,654 - Dsui_1481 0.24 +0.8 1,545,656 + Dsui_1481 0.24 -2.0 1,545,656 + Dsui_1481 0.24 -1.9 1,545,664 - Dsui_1481 0.25 +0.1 1,545,664 - Dsui_1481 0.25 -0.3 1,545,675 + Dsui_1481 0.26 -1.4 1,545,690 + Dsui_1481 0.27 -1.0 1,545,698 - Dsui_1481 0.28 -0.2 1,545,698 - Dsui_1481 0.28 +0.2 1,545,698 - Dsui_1481 0.28 +0.2 1,545,721 + Dsui_1481 0.30 -3.2 1,545,755 - Dsui_1481 0.33 +0.7 1,545,755 - Dsui_1481 0.33 +0.4 1,545,755 - Dsui_1481 0.33 +0.7 1,545,771 + Dsui_1481 0.34 -2.4 1,545,771 + Dsui_1481 0.34 +0.7 1,545,779 - Dsui_1481 0.35 +2.5 1,545,779 - Dsui_1481 0.35 +0.9 1,545,779 - Dsui_1481 0.35 +0.1 1,545,814 + Dsui_1481 0.38 -1.5 1,545,837 + +1.2 1,545,873 + Dsui_1481 0.43 -0.1 1,545,881 + Dsui_1481 0.44 +0.3 1,545,889 - Dsui_1481 0.45 -1.1 1,545,969 - Dsui_1481 0.52 +0.3 1,545,969 - Dsui_1481 0.52 +0.0 1,545,976 + Dsui_1481 0.52 -4.0 1,545,989 + Dsui_1481 0.54 +0.0 1,546,187 + Dsui_1481 0.71 +0.9 1,546,215 + Dsui_1481 0.74 +0.0 1,546,216 - Dsui_1481 0.74 +1.2 1,546,272 - Dsui_1481 0.79 +0.1 1,546,335 + Dsui_1481 0.85 -1.9 1,546,468 - +1.4 1,546,530 + +1.6 1,546,538 - -1.7 1,546,588 - +0.3 1,546,645 + -0.1 1,546,646 - -0.2 1,546,650 + +0.3 1,546,652 + +0.5 1,546,655 - +1.3 1,546,660 - +0.2 1,546,711 - +0.9 1,546,773 + -1.1 1,546,776 - -1.8 1,546,776 - +0.8 1,546,960 + -0.2 1,546,960 + -1.5 1,546,999 - -2.2 1,547,037 + -0.5 1,547,108 + -0.1 1,547,241 + +0.5 1,547,445 + Dsui_1482 0.79 +0.6 1,547,453 - Dsui_1482 0.82 -2.2 1,547,453 - Dsui_1482 0.82 -3.8 1,547,468 - Dsui_1482 0.87 +0.1 1,547,507 + -0.9
Or see this region's nucleotide sequence