Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11960 and BWI76_RS11965 are separated by 191 nucleotides BWI76_RS11965 and BWI76_RS11970 overlap by 1 nucleotides BWI76_RS11970 and BWI76_RS11975 are separated by 97 nucleotides BWI76_RS11975 and BWI76_RS11980 are separated by 261 nucleotides
BWI76_RS11960: BWI76_RS11960 - lipopolysaccharide assembly protein LapB, at 2,518,038 to 2,519,207
_RS11960
BWI76_RS11965: BWI76_RS11965 - orotidine-5'-phosphate decarboxylase, at 2,519,399 to 2,520,136
_RS11965
BWI76_RS11970: BWI76_RS11970 - stress response translation initiation inhibitor YciH, at 2,520,136 to 2,520,462
_RS11970
BWI76_RS11975: BWI76_RS11975 - lipoprotein, at 2,520,560 to 2,520,781
_RS11975
BWI76_RS11980: BWI76_RS11980 - DeoR family transcriptional regulator, at 2,521,043 to 2,521,792
_RS11980
Position (kb)
2519
2520
2521 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2519.432 kb on + strand at 2519.456 kb on + strand at 2519.791 kb on - strand, within BWI76_RS11965 at 2519.933 kb on + strand, within BWI76_RS11965 at 2519.960 kb on - strand, within BWI76_RS11965 at 2520.053 kb on + strand, within BWI76_RS11965 at 2520.231 kb on - strand, within BWI76_RS11970 at 2520.364 kb on + strand, within BWI76_RS11970 at 2520.384 kb on + strand, within BWI76_RS11970 at 2520.427 kb on + strand, within BWI76_RS11970 at 2520.440 kb on + strand at 2520.509 kb on + strand at 2520.595 kb on - strand, within BWI76_RS11975 at 2520.613 kb on - strand, within BWI76_RS11975 at 2520.614 kb on + strand, within BWI76_RS11975 at 2520.621 kb on + strand, within BWI76_RS11975 at 2520.621 kb on + strand, within BWI76_RS11975 at 2520.622 kb on - strand, within BWI76_RS11975 at 2520.622 kb on - strand, within BWI76_RS11975 at 2520.622 kb on - strand, within BWI76_RS11975 at 2520.627 kb on - strand, within BWI76_RS11975 at 2520.629 kb on - strand, within BWI76_RS11975 at 2520.629 kb on - strand, within BWI76_RS11975 at 2520.632 kb on + strand, within BWI76_RS11975 at 2520.640 kb on - strand, within BWI76_RS11975 at 2520.642 kb on + strand, within BWI76_RS11975 at 2520.660 kb on - strand, within BWI76_RS11975 at 2520.700 kb on + strand, within BWI76_RS11975 at 2520.700 kb on + strand, within BWI76_RS11975 at 2520.705 kb on + strand, within BWI76_RS11975 at 2520.737 kb on + strand, within BWI76_RS11975 at 2520.742 kb on + strand, within BWI76_RS11975 at 2520.742 kb on + strand at 2520.835 kb on - strand at 2520.853 kb on - strand at 2520.865 kb on + strand at 2520.880 kb on + strand at 2520.888 kb on - strand at 2520.889 kb on - strand at 2520.889 kb on - strand at 2520.889 kb on - strand at 2520.889 kb on - strand at 2520.889 kb on - strand at 2520.900 kb on + strand at 2520.900 kb on + strand at 2520.900 kb on + strand at 2520.900 kb on + strand at 2520.908 kb on - strand at 2520.908 kb on - strand at 2520.908 kb on - strand at 2520.908 kb on - strand at 2520.923 kb on - strand at 2520.923 kb on - strand at 2520.938 kb on - strand at 2521.020 kb on + strand at 2521.023 kb on - strand at 2521.030 kb on + strand at 2521.041 kb on + strand at 2521.041 kb on + strand at 2521.068 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 2,519,432 + -1.6 2,519,456 + -2.3 2,519,791 - BWI76_RS11965 0.53 -3.4 2,519,933 + BWI76_RS11965 0.72 -4.5 2,519,960 - BWI76_RS11965 0.76 -2.5 2,520,053 + BWI76_RS11965 0.89 -1.9 2,520,231 - BWI76_RS11970 0.29 +0.3 2,520,364 + BWI76_RS11970 0.70 -0.1 2,520,384 + BWI76_RS11970 0.76 -0.2 2,520,427 + BWI76_RS11970 0.89 -0.4 2,520,440 + -0.6 2,520,509 + -0.3 2,520,595 - BWI76_RS11975 0.16 -0.4 2,520,613 - BWI76_RS11975 0.24 -1.4 2,520,614 + BWI76_RS11975 0.24 +1.3 2,520,621 + BWI76_RS11975 0.27 -1.3 2,520,621 + BWI76_RS11975 0.27 +0.1 2,520,622 - BWI76_RS11975 0.28 +0.2 2,520,622 - BWI76_RS11975 0.28 -0.3 2,520,622 - BWI76_RS11975 0.28 -0.1 2,520,627 - BWI76_RS11975 0.30 +0.4 2,520,629 - BWI76_RS11975 0.31 +0.0 2,520,629 - BWI76_RS11975 0.31 -0.3 2,520,632 + BWI76_RS11975 0.32 -1.3 2,520,640 - BWI76_RS11975 0.36 +0.3 2,520,642 + BWI76_RS11975 0.37 +0.2 2,520,660 - BWI76_RS11975 0.45 +0.8 2,520,700 + BWI76_RS11975 0.63 -0.3 2,520,700 + BWI76_RS11975 0.63 -0.8 2,520,705 + BWI76_RS11975 0.65 -0.5 2,520,737 + BWI76_RS11975 0.80 -0.1 2,520,742 + BWI76_RS11975 0.82 +1.0 2,520,742 + -0.8 2,520,835 - -0.1 2,520,853 - +0.0 2,520,865 + -1.2 2,520,880 + -0.4 2,520,888 - -0.7 2,520,889 - -0.6 2,520,889 - -0.2 2,520,889 - +0.1 2,520,889 - -0.3 2,520,889 - +0.1 2,520,900 + -0.7 2,520,900 + -1.2 2,520,900 + -0.8 2,520,900 + -1.8 2,520,908 - +0.2 2,520,908 - -0.1 2,520,908 - -0.0 2,520,908 - -0.0 2,520,923 - +0.0 2,520,923 - +0.8 2,520,938 - +0.6 2,521,020 + -0.3 2,521,023 - +0.2 2,521,030 + -0.5 2,521,041 + -1.2 2,521,041 + +1.4 2,521,068 + +0.1
Or see this region's nucleotide sequence