Experiment: D-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_555 and Ac3H11_556 are separated by 51 nucleotides Ac3H11_556 and Ac3H11_557 are separated by 378 nucleotides Ac3H11_557 and Ac3H11_558 are separated by 110 nucleotides
Ac3H11_555 - Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13), at 262,218 to 263,216
_555
Ac3H11_556 - hypothetical protein, at 263,268 to 263,630
_556
Ac3H11_557 - Adenylate cyclase (EC 4.6.1.1), at 264,009 to 264,938
_557
Ac3H11_558 - Penicillin amidase (EC 3.5.1.11), at 265,049 to 267,595
_558
Position (kb) 264
265 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 263.046 kb on + strand, within Ac3H11_555 at 263.260 kb on + strand at 263.260 kb on + strand at 263.261 kb on - strand at 263.261 kb on - strand at 263.269 kb on + strand at 263.269 kb on + strand at 263.299 kb on - strand at 263.425 kb on + strand, within Ac3H11_556 at 263.425 kb on + strand, within Ac3H11_556 at 263.426 kb on - strand, within Ac3H11_556 at 263.426 kb on - strand, within Ac3H11_556 at 263.426 kb on - strand, within Ac3H11_556 at 263.426 kb on - strand, within Ac3H11_556 at 263.426 kb on - strand, within Ac3H11_556 at 263.426 kb on - strand, within Ac3H11_556 at 263.426 kb on - strand, within Ac3H11_556 at 263.426 kb on - strand, within Ac3H11_556 at 263.452 kb on + strand, within Ac3H11_556 at 263.453 kb on - strand, within Ac3H11_556 at 263.453 kb on - strand, within Ac3H11_556 at 263.674 kb on - strand at 263.719 kb on - strand at 263.721 kb on - strand at 263.803 kb on - strand at 263.815 kb on + strand at 263.815 kb on + strand at 263.815 kb on + strand at 263.815 kb on + strand at 263.816 kb on - strand at 263.816 kb on - strand at 263.816 kb on - strand at 263.816 kb on - strand at 263.970 kb on + strand at 263.970 kb on + strand at 263.970 kb on + strand at 263.990 kb on + strand at 263.990 kb on + strand at 263.990 kb on + strand at 263.990 kb on + strand at 263.991 kb on - strand at 263.991 kb on - strand at 263.991 kb on - strand at 263.993 kb on + strand at 263.993 kb on + strand at 263.993 kb on + strand at 263.993 kb on + strand at 263.993 kb on + strand at 263.993 kb on + strand at 263.994 kb on - strand at 263.994 kb on - strand at 263.996 kb on + strand at 263.997 kb on - strand at 263.997 kb on - strand at 264.053 kb on + strand at 264.054 kb on - strand at 264.054 kb on - strand at 264.054 kb on - strand at 264.063 kb on + strand at 264.064 kb on - strand at 264.064 kb on - strand at 264.336 kb on + strand, within Ac3H11_557 at 264.336 kb on + strand, within Ac3H11_557 at 264.501 kb on + strand, within Ac3H11_557 at 264.501 kb on + strand, within Ac3H11_557 at 264.502 kb on - strand, within Ac3H11_557 at 264.502 kb on - strand, within Ac3H11_557 at 264.502 kb on - strand, within Ac3H11_557 at 264.502 kb on - strand, within Ac3H11_557 at 264.502 kb on - strand, within Ac3H11_557 at 264.856 kb on + strand at 264.857 kb on - strand at 264.876 kb on - strand at 264.876 kb on - strand at 264.876 kb on - strand at 264.876 kb on - strand at 265.008 kb on - strand at 265.008 kb on - strand at 265.008 kb on - strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.122 kb on - strand at 265.122 kb on - strand at 265.122 kb on - strand at 265.122 kb on - strand at 265.122 kb on - strand at 265.122 kb on - strand at 265.122 kb on - strand at 265.262 kb on + strand at 265.262 kb on + strand at 265.262 kb on + strand at 265.262 kb on + strand at 265.262 kb on + strand at 265.262 kb on + strand at 265.263 kb on - strand at 265.263 kb on - strand at 265.263 kb on - strand at 265.263 kb on - strand at 265.263 kb on - strand at 265.263 kb on - strand at 265.409 kb on + strand, within Ac3H11_558 at 265.409 kb on + strand, within Ac3H11_558 at 265.452 kb on - strand, within Ac3H11_558 at 265.477 kb on + strand, within Ac3H11_558 at 265.477 kb on + strand, within Ac3H11_558 at 265.478 kb on - strand, within Ac3H11_558 at 265.568 kb on - strand, within Ac3H11_558 at 265.688 kb on + strand, within Ac3H11_558 at 265.734 kb on - strand, within Ac3H11_558 at 265.751 kb on + strand, within Ac3H11_558 at 265.752 kb on - strand, within Ac3H11_558
Per-strain Table
Position Strand Gene LocusTag Fraction D-Alanine (N) remove 263,046 + Ac3H11_555 0.83 -1.6 263,260 + +0.3 263,260 + +0.8 263,261 - -0.4 263,261 - -0.4 263,269 + +0.7 263,269 + -2.0 263,299 - -3.9 263,425 + Ac3H11_556 0.43 -0.3 263,425 + Ac3H11_556 0.43 -0.3 263,426 - Ac3H11_556 0.44 +1.0 263,426 - Ac3H11_556 0.44 +0.2 263,426 - Ac3H11_556 0.44 +0.0 263,426 - Ac3H11_556 0.44 +0.2 263,426 - Ac3H11_556 0.44 +1.8 263,426 - Ac3H11_556 0.44 +0.2 263,426 - Ac3H11_556 0.44 -1.9 263,426 - Ac3H11_556 0.44 -0.3 263,452 + Ac3H11_556 0.51 +1.2 263,453 - Ac3H11_556 0.51 -3.4 263,453 - Ac3H11_556 0.51 +1.6 263,674 - +1.3 263,719 - -0.3 263,721 - -2.9 263,803 - -0.8 263,815 + +1.4 263,815 + -1.0 263,815 + -0.9 263,815 + -1.7 263,816 - +1.5 263,816 - -2.3 263,816 - -2.5 263,816 - -0.4 263,970 + +0.8 263,970 + -1.5 263,970 + +1.2 263,990 + +1.4 263,990 + -2.5 263,990 + +0.7 263,990 + +0.3 263,991 - -2.9 263,991 - +1.0 263,991 - +1.4 263,993 + +1.9 263,993 + -1.6 263,993 + +1.8 263,993 + +0.9 263,993 + -0.8 263,993 + +1.9 263,994 - +0.3 263,994 - +0.5 263,996 + -0.6 263,997 - -0.7 263,997 - -0.1 264,053 + -1.2 264,054 - -0.3 264,054 - +1.1 264,054 - +0.8 264,063 + +0.6 264,064 - -2.5 264,064 - +0.7 264,336 + Ac3H11_557 0.35 +0.4 264,336 + Ac3H11_557 0.35 +3.8 264,501 + Ac3H11_557 0.53 +0.2 264,501 + Ac3H11_557 0.53 -0.6 264,502 - Ac3H11_557 0.53 +2.6 264,502 - Ac3H11_557 0.53 +0.7 264,502 - Ac3H11_557 0.53 -0.2 264,502 - Ac3H11_557 0.53 +1.5 264,502 - Ac3H11_557 0.53 -1.6 264,856 + +0.7 264,857 - -1.5 264,876 - +0.2 264,876 - +1.2 264,876 - +1.8 264,876 - -0.1 265,008 - +1.3 265,008 - +0.2 265,008 - +1.3 265,121 + -0.3 265,121 + +0.9 265,121 + -1.1 265,121 + +0.0 265,121 + +0.2 265,121 + +1.0 265,121 + -3.2 265,121 + +1.4 265,121 + -0.3 265,121 + -1.8 265,121 + +0.4 265,122 - +1.0 265,122 - +1.0 265,122 - +0.8 265,122 - -0.8 265,122 - -1.3 265,122 - -1.4 265,122 - +0.8 265,262 + -0.3 265,262 + +0.7 265,262 + -0.1 265,262 + +0.2 265,262 + +1.7 265,262 + -0.5 265,263 - +0.4 265,263 - -2.8 265,263 - +0.6 265,263 - -1.7 265,263 - -1.8 265,263 - +0.4 265,409 + Ac3H11_558 0.14 -1.5 265,409 + Ac3H11_558 0.14 +1.8 265,452 - Ac3H11_558 0.16 -1.0 265,477 + Ac3H11_558 0.17 +1.0 265,477 + Ac3H11_558 0.17 +1.3 265,478 - Ac3H11_558 0.17 +1.0 265,568 - Ac3H11_558 0.20 -4.6 265,688 + Ac3H11_558 0.25 -3.7 265,734 - Ac3H11_558 0.27 +1.3 265,751 + Ac3H11_558 0.28 +2.1 265,752 - Ac3H11_558 0.28 +1.1
Or see this region's nucleotide sequence