Experiment: D-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_508 and Ac3H11_509 are separated by 285 nucleotides Ac3H11_509 and Ac3H11_510 are separated by 316 nucleotides
Ac3H11_508 - Pyrophosphate-energized proton pump (EC 3.6.1.1), at 204,793 to 206,874
_508
Ac3H11_509 - Inorganic pyrophosphatase (EC 3.6.1.1), at 207,160 to 207,696
_509
Ac3H11_510 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 208,013 to 210,037
_510
Position (kb) 207
208 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 206.426 kb on + strand, within Ac3H11_508 at 206.426 kb on + strand, within Ac3H11_508 at 206.426 kb on + strand, within Ac3H11_508 at 206.426 kb on + strand, within Ac3H11_508 at 206.427 kb on - strand, within Ac3H11_508 at 206.427 kb on - strand, within Ac3H11_508 at 206.427 kb on - strand, within Ac3H11_508 at 206.427 kb on - strand, within Ac3H11_508 at 206.427 kb on - strand, within Ac3H11_508 at 206.427 kb on - strand, within Ac3H11_508 at 206.427 kb on - strand, within Ac3H11_508 at 206.646 kb on + strand, within Ac3H11_508 at 206.694 kb on - strand at 206.694 kb on - strand at 206.694 kb on - strand at 206.694 kb on - strand at 206.709 kb on - strand at 206.709 kb on - strand at 206.839 kb on + strand at 206.840 kb on - strand at 206.862 kb on + strand at 206.862 kb on + strand at 206.863 kb on - strand at 206.863 kb on - strand at 207.014 kb on + strand at 207.042 kb on + strand at 207.042 kb on + strand at 207.149 kb on + strand at 207.783 kb on + strand at 207.905 kb on - strand at 208.010 kb on + strand at 208.010 kb on + strand at 208.010 kb on + strand at 208.010 kb on + strand at 208.010 kb on + strand at 208.010 kb on + strand at 208.010 kb on + strand at 208.010 kb on + strand at 208.011 kb on - strand at 208.011 kb on - strand at 208.011 kb on - strand at 208.011 kb on - strand at 208.011 kb on - strand at 208.011 kb on - strand at 208.196 kb on + strand at 208.196 kb on + strand at 208.196 kb on + strand at 208.196 kb on + strand at 208.197 kb on - strand at 208.197 kb on - strand at 208.197 kb on - strand at 208.197 kb on - strand at 208.317 kb on - strand, within Ac3H11_510 at 208.317 kb on - strand, within Ac3H11_510 at 208.364 kb on + strand, within Ac3H11_510 at 208.365 kb on - strand, within Ac3H11_510 at 208.385 kb on + strand, within Ac3H11_510 at 208.385 kb on + strand, within Ac3H11_510 at 208.484 kb on + strand, within Ac3H11_510 at 208.484 kb on + strand, within Ac3H11_510 at 208.484 kb on + strand, within Ac3H11_510 at 208.484 kb on + strand, within Ac3H11_510 at 208.484 kb on + strand, within Ac3H11_510 at 208.484 kb on + strand, within Ac3H11_510 at 208.485 kb on - strand, within Ac3H11_510 at 208.485 kb on - strand, within Ac3H11_510 at 208.485 kb on - strand, within Ac3H11_510 at 208.485 kb on - strand, within Ac3H11_510
Per-strain Table
Position Strand Gene LocusTag Fraction D-Alanine (N) remove 206,426 + Ac3H11_508 0.78 +1.7 206,426 + Ac3H11_508 0.78 -2.6 206,426 + Ac3H11_508 0.78 -2.7 206,426 + Ac3H11_508 0.78 -0.7 206,427 - Ac3H11_508 0.78 +0.3 206,427 - Ac3H11_508 0.78 -2.7 206,427 - Ac3H11_508 0.78 -2.0 206,427 - Ac3H11_508 0.78 -0.2 206,427 - Ac3H11_508 0.78 +0.4 206,427 - Ac3H11_508 0.78 +0.6 206,427 - Ac3H11_508 0.78 +0.9 206,646 + Ac3H11_508 0.89 +1.7 206,694 - +1.2 206,694 - +0.7 206,694 - +1.4 206,694 - +0.2 206,709 - +1.6 206,709 - -0.6 206,839 + -0.2 206,840 - -0.8 206,862 + +0.8 206,862 + -3.0 206,863 - +0.4 206,863 - +0.8 207,014 + -1.8 207,042 + +0.8 207,042 + +0.2 207,149 + +1.3 207,783 + -0.2 207,905 - +0.6 208,010 + +0.5 208,010 + -0.4 208,010 + +2.3 208,010 + +0.4 208,010 + -0.5 208,010 + +1.4 208,010 + +0.3 208,010 + -2.7 208,011 - +0.4 208,011 - +1.2 208,011 - -0.4 208,011 - -1.3 208,011 - -0.7 208,011 - +0.9 208,196 + +0.4 208,196 + +0.7 208,196 + -0.6 208,196 + -1.9 208,197 - +1.3 208,197 - -1.2 208,197 - -1.9 208,197 - -0.1 208,317 - Ac3H11_510 0.15 +0.6 208,317 - Ac3H11_510 0.15 +0.1 208,364 + Ac3H11_510 0.17 +1.4 208,365 - Ac3H11_510 0.17 -1.8 208,385 + Ac3H11_510 0.18 -0.8 208,385 + Ac3H11_510 0.18 -0.4 208,484 + Ac3H11_510 0.23 +1.2 208,484 + Ac3H11_510 0.23 -2.0 208,484 + Ac3H11_510 0.23 -1.2 208,484 + Ac3H11_510 0.23 +0.8 208,484 + Ac3H11_510 0.23 +1.6 208,484 + Ac3H11_510 0.23 +1.6 208,485 - Ac3H11_510 0.23 -0.8 208,485 - Ac3H11_510 0.23 -0.0 208,485 - Ac3H11_510 0.23 -0.2 208,485 - Ac3H11_510 0.23 +0.7
Or see this region's nucleotide sequence