Experiment: D-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3682 and Ac3H11_3683 are separated by 586 nucleotides
Ac3H11_3682 - hypothetical protein, at 37,368 to 37,865
_3682
Ac3H11_3683 - Integrase, at 38,452 to 39,783
_3683
Position (kb) 38
39
40 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 37.617 kb on + strand, within Ac3H11_3682 at 37.618 kb on - strand, within Ac3H11_3682 at 37.660 kb on - strand, within Ac3H11_3682 at 37.713 kb on + strand, within Ac3H11_3682 at 37.713 kb on + strand, within Ac3H11_3682 at 37.714 kb on - strand, within Ac3H11_3682 at 37.758 kb on + strand, within Ac3H11_3682 at 37.759 kb on - strand, within Ac3H11_3682 at 37.759 kb on - strand, within Ac3H11_3682 at 37.830 kb on + strand at 37.830 kb on + strand at 37.830 kb on + strand at 37.831 kb on - strand at 37.831 kb on - strand at 37.831 kb on - strand at 37.831 kb on - strand at 37.831 kb on - strand at 37.851 kb on + strand at 37.851 kb on + strand at 37.867 kb on + strand at 37.867 kb on + strand at 37.867 kb on + strand at 37.868 kb on - strand at 37.868 kb on - strand at 37.868 kb on - strand at 37.868 kb on - strand at 37.868 kb on - strand at 38.079 kb on + strand at 38.234 kb on + strand at 38.234 kb on + strand at 38.235 kb on - strand at 38.235 kb on - strand at 38.235 kb on - strand at 38.235 kb on - strand at 38.353 kb on + strand at 38.353 kb on + strand at 38.354 kb on - strand at 38.354 kb on - strand at 38.395 kb on - strand at 38.395 kb on - strand at 38.395 kb on - strand at 38.395 kb on - strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.402 kb on + strand at 38.403 kb on - strand at 38.403 kb on - strand at 38.403 kb on - strand at 38.403 kb on - strand at 38.403 kb on - strand at 38.403 kb on - strand at 38.403 kb on - strand at 38.403 kb on - strand at 38.403 kb on - strand at 38.403 kb on - strand at 38.564 kb on - strand at 38.564 kb on - strand at 38.564 kb on - strand at 38.564 kb on - strand at 38.564 kb on - strand at 38.591 kb on - strand, within Ac3H11_3683 at 38.632 kb on + strand, within Ac3H11_3683 at 38.792 kb on - strand, within Ac3H11_3683 at 38.792 kb on - strand, within Ac3H11_3683 at 38.859 kb on + strand, within Ac3H11_3683 at 38.859 kb on + strand, within Ac3H11_3683 at 38.859 kb on + strand, within Ac3H11_3683 at 38.863 kb on + strand, within Ac3H11_3683 at 38.863 kb on + strand, within Ac3H11_3683 at 38.863 kb on + strand, within Ac3H11_3683 at 38.863 kb on + strand, within Ac3H11_3683 at 38.863 kb on + strand, within Ac3H11_3683 at 38.863 kb on + strand, within Ac3H11_3683 at 38.863 kb on + strand, within Ac3H11_3683 at 38.863 kb on + strand, within Ac3H11_3683 at 38.863 kb on + strand, within Ac3H11_3683 at 38.864 kb on - strand, within Ac3H11_3683 at 38.864 kb on - strand, within Ac3H11_3683 at 38.864 kb on - strand, within Ac3H11_3683 at 38.864 kb on - strand, within Ac3H11_3683 at 38.864 kb on - strand, within Ac3H11_3683 at 38.864 kb on - strand, within Ac3H11_3683 at 38.864 kb on - strand, within Ac3H11_3683 at 38.864 kb on - strand, within Ac3H11_3683 at 38.864 kb on - strand, within Ac3H11_3683 at 38.903 kb on + strand, within Ac3H11_3683 at 38.903 kb on + strand, within Ac3H11_3683 at 38.903 kb on + strand, within Ac3H11_3683 at 38.904 kb on - strand, within Ac3H11_3683 at 38.904 kb on - strand, within Ac3H11_3683 at 38.904 kb on - strand, within Ac3H11_3683 at 38.904 kb on - strand, within Ac3H11_3683 at 39.138 kb on - strand, within Ac3H11_3683 at 39.188 kb on + strand, within Ac3H11_3683 at 39.189 kb on - strand, within Ac3H11_3683 at 39.189 kb on - strand, within Ac3H11_3683 at 39.266 kb on + strand, within Ac3H11_3683 at 39.397 kb on + strand, within Ac3H11_3683 at 39.397 kb on + strand, within Ac3H11_3683 at 39.397 kb on + strand, within Ac3H11_3683 at 39.397 kb on + strand, within Ac3H11_3683 at 39.397 kb on + strand, within Ac3H11_3683 at 39.397 kb on + strand, within Ac3H11_3683 at 39.397 kb on + strand, within Ac3H11_3683 at 39.397 kb on + strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.398 kb on - strand, within Ac3H11_3683 at 39.401 kb on + strand, within Ac3H11_3683 at 39.401 kb on + strand, within Ac3H11_3683 at 39.401 kb on + strand, within Ac3H11_3683 at 39.402 kb on - strand, within Ac3H11_3683 at 39.402 kb on - strand, within Ac3H11_3683 at 39.402 kb on - strand, within Ac3H11_3683 at 39.402 kb on - strand, within Ac3H11_3683 at 39.402 kb on - strand, within Ac3H11_3683 at 39.402 kb on - strand, within Ac3H11_3683 at 39.483 kb on - strand, within Ac3H11_3683 at 39.516 kb on + strand, within Ac3H11_3683 at 39.516 kb on + strand, within Ac3H11_3683 at 39.671 kb on - strand at 39.671 kb on - strand at 39.696 kb on + strand at 39.696 kb on + strand at 39.696 kb on + strand at 39.696 kb on + strand at 39.781 kb on + strand at 39.782 kb on - strand at 39.782 kb on - strand at 39.792 kb on + strand at 39.793 kb on - strand at 39.793 kb on - strand at 39.793 kb on - strand at 39.856 kb on + strand at 39.886 kb on - strand at 39.901 kb on + strand at 39.901 kb on + strand at 39.901 kb on + strand at 40.101 kb on + strand at 40.101 kb on + strand at 40.101 kb on + strand at 40.102 kb on - strand at 40.102 kb on - strand at 40.102 kb on - strand at 40.258 kb on + strand at 40.258 kb on + strand at 40.259 kb on - strand at 40.259 kb on - strand at 40.259 kb on - strand at 40.259 kb on - strand at 40.266 kb on + strand at 40.266 kb on + strand at 40.266 kb on + strand at 40.281 kb on + strand at 40.281 kb on + strand at 40.282 kb on - strand at 40.282 kb on - strand at 40.282 kb on - strand at 40.282 kb on - strand at 40.290 kb on + strand at 40.290 kb on + strand at 40.290 kb on + strand at 40.473 kb on + strand at 40.474 kb on - strand at 40.474 kb on - strand at 40.474 kb on - strand at 40.492 kb on + strand at 40.492 kb on + strand at 40.492 kb on + strand at 40.492 kb on + strand at 40.592 kb on + strand at 40.593 kb on - strand at 40.593 kb on - strand at 40.593 kb on - strand at 40.606 kb on + strand at 40.607 kb on - strand at 40.607 kb on - strand at 40.610 kb on + strand at 40.610 kb on + strand at 40.610 kb on + strand at 40.610 kb on + strand at 40.610 kb on + strand at 40.610 kb on + strand at 40.610 kb on + strand at 40.610 kb on + strand at 40.610 kb on + strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.611 kb on - strand at 40.617 kb on - strand at 40.654 kb on + strand at 40.654 kb on + strand at 40.738 kb on + strand at 40.739 kb on - strand at 40.739 kb on - strand at 40.739 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Alanine (N) remove 37,617 + Ac3H11_3682 0.50 +1.0 37,618 - Ac3H11_3682 0.50 +0.5 37,660 - Ac3H11_3682 0.59 -3.8 37,713 + Ac3H11_3682 0.69 +1.1 37,713 + Ac3H11_3682 0.69 -0.5 37,714 - Ac3H11_3682 0.69 -2.1 37,758 + Ac3H11_3682 0.78 -1.7 37,759 - Ac3H11_3682 0.79 -1.6 37,759 - Ac3H11_3682 0.79 -0.1 37,830 + -3.3 37,830 + -1.1 37,830 + -0.2 37,831 - -1.0 37,831 - +0.5 37,831 - +0.8 37,831 - +0.5 37,831 - -0.8 37,851 + +0.1 37,851 + +0.5 37,867 + -4.0 37,867 + +1.0 37,867 + +0.1 37,868 - +1.7 37,868 - -2.3 37,868 - -1.6 37,868 - +0.9 37,868 - -2.7 38,079 + -0.1 38,234 + -3.6 38,234 + -0.5 38,235 - -0.1 38,235 - -0.7 38,235 - -1.8 38,235 - -0.0 38,353 + +1.4 38,353 + +3.8 38,354 - -3.4 38,354 - -0.1 38,395 - +0.4 38,395 - -2.9 38,395 - -2.7 38,395 - +0.7 38,402 + -1.0 38,402 + -0.9 38,402 + +1.2 38,402 + +0.8 38,402 + +0.3 38,402 + +0.9 38,402 + -2.2 38,402 + -1.4 38,402 + +2.2 38,402 + -1.4 38,402 + -2.7 38,402 + -1.5 38,403 - -0.3 38,403 - +0.8 38,403 - +0.8 38,403 - -0.4 38,403 - +1.1 38,403 - +0.4 38,403 - -1.0 38,403 - +2.4 38,403 - -3.2 38,403 - -3.2 38,564 - -2.3 38,564 - -1.3 38,564 - -2.2 38,564 - -3.3 38,564 - -0.1 38,591 - Ac3H11_3683 0.10 +1.6 38,632 + Ac3H11_3683 0.14 -0.4 38,792 - Ac3H11_3683 0.26 +1.1 38,792 - Ac3H11_3683 0.26 +0.4 38,859 + Ac3H11_3683 0.31 +0.4 38,859 + Ac3H11_3683 0.31 -0.4 38,859 + Ac3H11_3683 0.31 +0.7 38,863 + Ac3H11_3683 0.31 -1.7 38,863 + Ac3H11_3683 0.31 +0.9 38,863 + Ac3H11_3683 0.31 +0.6 38,863 + Ac3H11_3683 0.31 -1.1 38,863 + Ac3H11_3683 0.31 +0.5 38,863 + Ac3H11_3683 0.31 +0.3 38,863 + Ac3H11_3683 0.31 +1.0 38,863 + Ac3H11_3683 0.31 -0.9 38,863 + Ac3H11_3683 0.31 +0.6 38,864 - Ac3H11_3683 0.31 -0.4 38,864 - Ac3H11_3683 0.31 -1.3 38,864 - Ac3H11_3683 0.31 +1.3 38,864 - Ac3H11_3683 0.31 -3.3 38,864 - Ac3H11_3683 0.31 +1.0 38,864 - Ac3H11_3683 0.31 -2.6 38,864 - Ac3H11_3683 0.31 -2.2 38,864 - Ac3H11_3683 0.31 +0.9 38,864 - Ac3H11_3683 0.31 -0.7 38,903 + Ac3H11_3683 0.34 +0.9 38,903 + Ac3H11_3683 0.34 -1.2 38,903 + Ac3H11_3683 0.34 +3.2 38,904 - Ac3H11_3683 0.34 -2.1 38,904 - Ac3H11_3683 0.34 -1.2 38,904 - Ac3H11_3683 0.34 -1.1 38,904 - Ac3H11_3683 0.34 -1.5 39,138 - Ac3H11_3683 0.52 +0.8 39,188 + Ac3H11_3683 0.55 -0.8 39,189 - Ac3H11_3683 0.55 -2.1 39,189 - Ac3H11_3683 0.55 +0.9 39,266 + Ac3H11_3683 0.61 +0.6 39,397 + Ac3H11_3683 0.71 +2.4 39,397 + Ac3H11_3683 0.71 -0.5 39,397 + Ac3H11_3683 0.71 +1.5 39,397 + Ac3H11_3683 0.71 -0.4 39,397 + Ac3H11_3683 0.71 +0.0 39,397 + Ac3H11_3683 0.71 +0.4 39,397 + Ac3H11_3683 0.71 +1.7 39,397 + Ac3H11_3683 0.71 -1.5 39,398 - Ac3H11_3683 0.71 +1.4 39,398 - Ac3H11_3683 0.71 +0.2 39,398 - Ac3H11_3683 0.71 -2.5 39,398 - Ac3H11_3683 0.71 +0.8 39,398 - Ac3H11_3683 0.71 -0.4 39,398 - Ac3H11_3683 0.71 -1.9 39,398 - Ac3H11_3683 0.71 -0.6 39,398 - Ac3H11_3683 0.71 -0.6 39,398 - Ac3H11_3683 0.71 +1.4 39,398 - Ac3H11_3683 0.71 +0.1 39,401 + Ac3H11_3683 0.71 +0.1 39,401 + Ac3H11_3683 0.71 +0.3 39,401 + Ac3H11_3683 0.71 -0.1 39,402 - Ac3H11_3683 0.71 +0.2 39,402 - Ac3H11_3683 0.71 -2.8 39,402 - Ac3H11_3683 0.71 +1.6 39,402 - Ac3H11_3683 0.71 +0.4 39,402 - Ac3H11_3683 0.71 -3.1 39,402 - Ac3H11_3683 0.71 -1.8 39,483 - Ac3H11_3683 0.77 -2.9 39,516 + Ac3H11_3683 0.80 +0.9 39,516 + Ac3H11_3683 0.80 +1.1 39,671 - +0.7 39,671 - +0.8 39,696 + +0.7 39,696 + -1.0 39,696 + +1.6 39,696 + +1.2 39,781 + +0.5 39,782 - +0.4 39,782 - +1.0 39,792 + +0.3 39,793 - -0.4 39,793 - -1.4 39,793 - +1.3 39,856 + -1.6 39,886 - -0.7 39,901 + +0.6 39,901 + +0.3 39,901 + -1.0 40,101 + -2.5 40,101 + +1.6 40,101 + -3.6 40,102 - -2.1 40,102 - -0.4 40,102 - -0.3 40,258 + -1.0 40,258 + +0.7 40,259 - +0.9 40,259 - -1.2 40,259 - -0.5 40,259 - -1.7 40,266 + -0.5 40,266 + -1.3 40,266 + -2.4 40,281 + +0.1 40,281 + +1.0 40,282 - -2.2 40,282 - -0.4 40,282 - -0.1 40,282 - -2.6 40,290 + -0.6 40,290 + -4.2 40,290 + +2.4 40,473 + -0.0 40,474 - -1.1 40,474 - -0.8 40,474 - -0.5 40,492 + -2.8 40,492 + -1.0 40,492 + +0.0 40,492 + +2.5 40,592 + +0.2 40,593 - -4.3 40,593 - +0.3 40,593 - -1.1 40,606 + +0.8 40,607 - +0.7 40,607 - +1.0 40,610 + -2.2 40,610 + +0.9 40,610 + -3.0 40,610 + +0.6 40,610 + +0.0 40,610 + -3.8 40,610 + +0.3 40,610 + +1.7 40,610 + -0.3 40,611 - +2.8 40,611 - -1.4 40,611 - -0.6 40,611 - +0.8 40,611 - +0.6 40,611 - +1.9 40,611 - +2.1 40,611 - +2.5 40,611 - +0.4 40,611 - +0.0 40,611 - -2.5 40,611 - +0.8 40,611 - -0.9 40,611 - +0.1 40,617 - +0.7 40,654 + -3.7 40,654 + -3.0 40,738 + -2.6 40,739 - -1.4 40,739 - -0.2 40,739 - +1.0
Or see this region's nucleotide sequence