Experiment: D-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3464 and Ac3H11_3465 overlap by 4 nucleotides Ac3H11_3465 and Ac3H11_3466 overlap by 1 nucleotides
Ac3H11_3464 - hypothetical protein, at 17,120 to 17,512
_3464
Ac3H11_3465 - hypothetical protein, at 17,509 to 18,021
_3465
Ac3H11_3466 - Chromosome (plasmid) partitioning protein ParB, at 18,021 to 20,156
_3466
Position (kb) 17
18
19 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 16.568 kb on + strand at 16.568 kb on - strand at 16.577 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.748 kb on - strand at 16.748 kb on - strand at 16.748 kb on - strand at 16.748 kb on - strand at 16.818 kb on + strand at 16.819 kb on - strand at 16.819 kb on - strand at 16.826 kb on + strand at 17.057 kb on + strand at 17.058 kb on - strand at 17.058 kb on - strand at 17.194 kb on + strand, within Ac3H11_3464 at 17.194 kb on + strand, within Ac3H11_3464 at 17.371 kb on - strand, within Ac3H11_3464 at 17.551 kb on + strand at 17.551 kb on + strand at 17.551 kb on + strand at 17.551 kb on + strand at 17.551 kb on + strand at 17.552 kb on - strand at 17.611 kb on + strand, within Ac3H11_3465 at 17.611 kb on + strand, within Ac3H11_3465 at 17.611 kb on + strand, within Ac3H11_3465 at 17.611 kb on + strand, within Ac3H11_3465 at 17.611 kb on + strand, within Ac3H11_3465 at 17.612 kb on - strand, within Ac3H11_3465 at 17.612 kb on - strand, within Ac3H11_3465 at 17.612 kb on - strand, within Ac3H11_3465 at 17.684 kb on + strand, within Ac3H11_3465 at 17.684 kb on + strand, within Ac3H11_3465 at 17.685 kb on - strand, within Ac3H11_3465 at 17.685 kb on - strand, within Ac3H11_3465 at 17.687 kb on + strand, within Ac3H11_3465 at 17.687 kb on + strand, within Ac3H11_3465 at 17.687 kb on + strand, within Ac3H11_3465 at 17.687 kb on + strand, within Ac3H11_3465 at 17.792 kb on + strand, within Ac3H11_3465 at 18.027 kb on - strand at 18.043 kb on + strand at 18.043 kb on + strand at 18.131 kb on + strand at 18.543 kb on + strand, within Ac3H11_3466 at 18.543 kb on + strand, within Ac3H11_3466 at 18.543 kb on + strand, within Ac3H11_3466 at 18.543 kb on + strand, within Ac3H11_3466 at 18.544 kb on - strand, within Ac3H11_3466 at 18.688 kb on + strand, within Ac3H11_3466 at 18.790 kb on + strand, within Ac3H11_3466 at 18.791 kb on - strand, within Ac3H11_3466 at 18.900 kb on + strand, within Ac3H11_3466 at 19.015 kb on + strand, within Ac3H11_3466 at 19.015 kb on + strand, within Ac3H11_3466 at 19.015 kb on + strand, within Ac3H11_3466 at 19.016 kb on - strand, within Ac3H11_3466 at 19.016 kb on - strand, within Ac3H11_3466
Per-strain Table
Position Strand Gene LocusTag Fraction D-Alanine (N) remove 16,568 + -0.1 16,568 - -1.2 16,577 + +1.8 16,747 + -1.4 16,747 + +1.1 16,747 + +0.3 16,747 + +0.3 16,747 + +2.5 16,747 + +1.3 16,747 + -0.9 16,747 + +1.5 16,747 + +3.1 16,748 - -1.7 16,748 - -1.9 16,748 - -1.3 16,748 - +0.8 16,818 + +0.3 16,819 - -1.4 16,819 - -3.1 16,826 + -0.5 17,057 + -2.7 17,058 - +0.0 17,058 - +3.3 17,194 + Ac3H11_3464 0.19 -1.7 17,194 + Ac3H11_3464 0.19 +0.6 17,371 - Ac3H11_3464 0.64 -3.3 17,551 + +0.6 17,551 + -0.2 17,551 + +1.2 17,551 + -0.6 17,551 + -1.0 17,552 - -0.1 17,611 + Ac3H11_3465 0.20 +1.6 17,611 + Ac3H11_3465 0.20 +1.1 17,611 + Ac3H11_3465 0.20 -0.0 17,611 + Ac3H11_3465 0.20 -2.6 17,611 + Ac3H11_3465 0.20 +0.2 17,612 - Ac3H11_3465 0.20 -0.1 17,612 - Ac3H11_3465 0.20 -0.0 17,612 - Ac3H11_3465 0.20 -0.7 17,684 + Ac3H11_3465 0.34 -0.6 17,684 + Ac3H11_3465 0.34 -3.9 17,685 - Ac3H11_3465 0.34 -2.4 17,685 - Ac3H11_3465 0.34 -0.5 17,687 + Ac3H11_3465 0.35 -3.3 17,687 + Ac3H11_3465 0.35 -1.9 17,687 + Ac3H11_3465 0.35 -1.0 17,687 + Ac3H11_3465 0.35 +0.6 17,792 + Ac3H11_3465 0.55 +1.3 18,027 - -0.4 18,043 + +0.0 18,043 + -2.3 18,131 + +2.0 18,543 + Ac3H11_3466 0.24 -2.5 18,543 + Ac3H11_3466 0.24 +1.1 18,543 + Ac3H11_3466 0.24 +0.2 18,543 + Ac3H11_3466 0.24 -2.5 18,544 - Ac3H11_3466 0.24 +0.1 18,688 + Ac3H11_3466 0.31 -2.6 18,790 + Ac3H11_3466 0.36 -0.6 18,791 - Ac3H11_3466 0.36 -2.7 18,900 + Ac3H11_3466 0.41 -2.8 19,015 + Ac3H11_3466 0.47 +0.9 19,015 + Ac3H11_3466 0.47 -1.3 19,015 + Ac3H11_3466 0.47 +1.0 19,016 - Ac3H11_3466 0.47 -0.0 19,016 - Ac3H11_3466 0.47 +0.6
Or see this region's nucleotide sequence