Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_29000

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
6,303,007	+				-2.1
6,303,007	+				-0.4
6,303,007	+				-2.0
6,303,008	-				-2.3
6,303,016	+				+1.2
6,303,016	+				-1.4
6,303,016	+				-2.9
6,303,016	+				+1.0
6,303,016	+				-0.4
6,303,016	+				+0.9
6,303,016	+				+1.9
6,303,017	-				-1.9
6,303,017	-				-1.9
6,303,017	-				-1.2
6,303,017	-				+0.9
6,303,017	-				-0.4
6,303,017	-				+0.6
6,303,115	+				+1.2
6,303,115	+				+1.2
6,303,115	+				+0.5
6,303,115	+				+1.2
6,303,115	+				+0.2
6,303,115	+				-1.0
6,303,116	-				-1.4
6,303,116	-				-1.6
6,303,116	-				-1.6
6,303,116	-				-0.8
6,303,116	-				-1.0
6,303,116	-				+3.4
6,303,116	-				-2.1
6,303,116	-				-0.8
6,303,116	-				-0.8
6,303,116	-				-2.3
6,303,116	-				-1.6
6,303,116	-				-2.2
6,303,127	+				-0.9
6,303,142	+				-1.0
6,303,142	+				-1.0
6,303,759	+				+1.0
6,303,759	+				-1.9
6,303,760	-				-0.0
6,303,760	-				-1.4
6,303,760	-				-0.0
6,303,760	-				+2.6
6,303,760	-				-1.8
6,303,760	-				+2.6
6,303,760	-				-0.4
6,303,764	+				-1.9
6,303,765	-				+1.7
6,303,765	-				-1.0
6,303,765	-				+0.6
6,303,765	-				-1.0
6,303,765	-				-1.2
6,303,876	+				+0.8
6,303,877	-				+2.4
6,303,916	+		AO353_29000	0.11	-0.2
6,303,917	-		AO353_29000	0.11	-1.0
6,303,977	-		AO353_29000	0.18	-0.0
6,304,351	+		AO353_29000	0.59	+1.2
6,304,351	+		AO353_29000	0.59	+0.1
6,304,351	+		AO353_29000	0.59	-2.0
6,304,352	-		AO353_29000	0.59	-0.8
6,304,352	-		AO353_29000	0.59	-1.0
6,304,699	-				-1.2
6,304,715	+				+3.2
6,304,756	+				-0.0
6,304,756	+				+0.6
6,304,756	+				-1.9
6,304,756	+				-2.1
6,304,756	+				-0.4
6,304,757	-				+0.8
6,304,757	-				-3.0
6,304,757	-				-0.0
6,304,757	-				+1.9
6,304,815	+				-0.4
6,304,815	+				+1.0
6,304,815	+				+2.4
6,304,816	-				+2.2
6,304,816	-				+2.3
6,304,816	-				-2.4
6,304,816	-				-2.1
6,304,862	+				-0.4
6,304,863	-				+1.0
6,304,863	-				-0.0
6,304,931	+		AO353_29005	0.20	-1.6
6,304,931	+		AO353_29005	0.20	+0.6
6,304,931	+		AO353_29005	0.20	-1.9
6,304,931	+		AO353_29005	0.20	-2.1
6,304,932	-		AO353_29005	0.20	-1.0
6,304,932	-		AO353_29005	0.20	-1.0
6,305,178	+				-1.6
6,305,178	+				-1.6
6,305,179	-				-0.0
6,305,179	-				+1.6
6,305,243	+				+1.0
6,305,243	+				-1.0
6,305,243	+				+1.6
6,305,243	+				-1.4
6,305,243	+				-0.0
6,305,243	+				+0.1
6,305,243	+				+1.0
6,305,243	+				+1.3
6,305,243	+				-1.0
6,305,244	-				-1.0
6,305,244	-				+1.6
6,305,244	-				-1.2
6,305,314	-				+1.2
6,305,314	-				+2.5
6,305,335	+				-1.8
6,305,335	+				-0.8
6,305,335	+				-0.8
6,305,336	-				-2.6
6,305,415	+				-0.0
6,305,415	+				+1.9
6,305,415	+				-0.7
6,305,415	+				-1.6
6,305,415	+				+1.3
6,305,415	+				-1.2
6,305,415	+				-2.1
6,305,415	+				+2.0
6,305,416	-				+2.2
6,305,416	-				-2.1
6,305,474	+				-0.8
6,305,474	+				-1.0
6,305,474	+				+2.8
6,305,474	+				-0.4
6,305,474	+				+0.6
6,305,474	+				-1.0
6,305,475	-				-0.0
6,305,475	-				-1.8
6,305,475	-				+1.1
6,305,509	+		AO353_29010	0.15	-2.1
6,305,509	+		AO353_29010	0.15	-1.8
6,305,509	+		AO353_29010	0.15	-1.8
6,305,509	+		AO353_29010	0.15	+2.1
6,305,509	+		AO353_29010	0.15	+0.2
6,305,510	-		AO353_29010	0.15	+1.2
6,305,510	-		AO353_29010	0.15	-2.2
6,305,510	-		AO353_29010	0.15	+0.4
6,305,510	-		AO353_29010	0.15	+0.7
6,305,513	-		AO353_29010	0.16	+0.6
6,305,589	+		AO353_29010	0.43	-0.0
6,305,590	-		AO353_29010	0.44	+2.7
6,305,640	+		AO353_29010	0.62	-2.0