Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28870

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
6,279,613	+				-0.1
6,279,614	-				+0.6
6,279,637	+				+0.6
6,279,637	+				-1.8
6,279,637	+				-1.0
6,279,637	+				-0.4
6,279,637	+				+0.6
6,279,637	+				+3.7
6,279,637	+				-1.6
6,279,637	+				-0.4
6,279,637	+				-0.0
6,279,638	-				-0.2
6,279,638	-				-0.0
6,279,638	-				+2.6
6,279,638	-				-1.6
6,279,766	+				-0.8
6,279,766	+				-0.0
6,279,766	+				+1.3
6,279,766	+				-1.0
6,279,767	-				-0.4
6,279,767	-				-0.0
6,279,767	-				+2.4
6,279,767	-				+0.7
6,279,767	-				-0.0
6,279,767	-				+1.4
6,279,767	-				+1.2
6,279,805	+				+0.6
6,279,805	+				+0.8
6,279,834	-				-0.4
6,279,870	-				+1.4
6,279,927	+		AO353_28860	0.26	-0.0
6,279,927	+		AO353_28860	0.26	+1.6
6,279,927	+		AO353_28860	0.26	-1.8
6,279,928	-		AO353_28860	0.26	-1.0
6,279,938	+		AO353_28860	0.29	-1.6
6,279,938	+				-0.8
6,279,939	-		AO353_28860	0.29	+0.2
6,279,939	-		AO353_28860	0.29	+4.6
6,279,939	-		AO353_28860	0.29	-0.0
6,279,966	+		AO353_28860	0.38	-0.0
6,279,967	-		AO353_28860	0.38	-0.8
6,279,967	-		AO353_28860	0.38	-0.8
6,279,999	-		AO353_28860	0.48	-1.0
6,280,167	+				-1.8
6,280,167	+				-0.4
6,280,168	-				-0.0
6,280,168	-				-1.2
6,280,168	-				+1.1
6,280,197	-				+2.2
6,280,197	-				-1.0
6,280,266	-		AO353_28865	0.39	-1.2
6,280,266	-		AO353_28865	0.39	-1.6
6,280,383	+				-0.0
6,280,383	+				-0.0
6,280,383	+				-0.4
6,280,383	+				+2.2
6,280,383	+				-1.2
6,280,415	-				-1.7
6,280,415	-				+0.8
6,280,452	+				+3.0
6,280,501	-				-0.5
6,280,534	+				-1.0
6,280,534	+				-1.0
6,280,534	+				+0.6
6,280,534	+				+0.1
6,280,534	+				+0.6
6,280,535	-				-1.8
6,280,535	-				-0.8
6,280,568	+		AO353_28870	0.11	-0.4
6,280,568	+		AO353_28870	0.11	+2.9
6,280,574	+		AO353_28870	0.14	-0.4
6,280,575	-		AO353_28870	0.15	-1.0
6,280,575	-		AO353_28870	0.15	-0.4
6,280,575	-		AO353_28870	0.15	-0.0
6,280,593	+		AO353_28870	0.24	-0.0
6,280,593	+		AO353_28870	0.24	-0.5
6,280,593	+		AO353_28870	0.24	-1.0
6,280,594	-		AO353_28870	0.25	+1.8
6,280,594	-		AO353_28870	0.25	-0.4
6,280,594	-		AO353_28870	0.25	-1.8
6,280,594	-		AO353_28870	0.25	-0.0
6,280,662	+		AO353_28870	0.61	-2.8
6,280,712	+		AO353_28870	0.87	+1.6
6,280,712	+		AO353_28870	0.87	-0.4
6,280,712	+		AO353_28870	0.87	-1.5
6,280,713	-		AO353_28870	0.88	-0.0
6,280,713	-		AO353_28870	0.88	+2.1
6,280,713	-		AO353_28870	0.88	+1.2
6,280,713	-		AO353_28870	0.88	+0.2
6,280,713	-		AO353_28870	0.88	+1.0
6,280,721	+				+0.6
6,280,722	-				+1.4
6,280,722	-				-1.8
6,280,755	+				+1.6
6,280,756	-				-1.0
6,280,756	-				+1.6
6,280,771	+				+0.2
6,280,772	-				+0.1
6,280,772	-				-0.4
6,280,799	-				+1.4
6,280,799	-				-0.0
6,280,857	+				-1.3
6,280,857	+				-1.4
6,280,857	+				+2.5
6,280,858	-				-2.1
6,280,872	+				-1.9
6,280,873	-				+1.8
6,280,950	-				-0.0
6,280,950	-				-1.0
6,280,980	+				-0.0
6,280,980	+				-1.6
6,280,981	-				-1.2
6,281,021	+		AO353_28875	0.16	+0.8
6,281,021	+		AO353_28875	0.16	-1.9
6,281,022	-		AO353_28875	0.16	+2.3
6,281,022	-		AO353_28875	0.16	-1.8
6,281,022	-		AO353_28875	0.16	+0.6
6,281,030	+		AO353_28875	0.19	+2.3
6,281,042	+		AO353_28875	0.23	-0.8
6,281,043	-		AO353_28875	0.23	-0.4
6,281,057	-		AO353_28875	0.28	-0.8
6,281,057	-		AO353_28875	0.28	-0.3
6,281,057	-		AO353_28875	0.28	+0.9
6,281,057	-		AO353_28875	0.28	+1.8
6,281,057	-		AO353_28875	0.28	-1.6
6,281,057	-		AO353_28875	0.28	+3.3
6,281,057	-		AO353_28875	0.28	-1.4
6,281,060	-		AO353_28875	0.29	-1.4
6,281,206	+		AO353_28875	0.77	-0.9
6,281,206	+		AO353_28875	0.77	+0.9
6,281,261	+				-0.4
6,281,261	+				-2.2
6,281,261	+				+4.2
6,281,261	+				+2.0
6,281,261	+				+1.0
6,281,261	+				-1.2
6,281,261	+				+2.7
6,281,261	+				+0.0
6,281,261	+				+1.4
6,281,261	+				-3.1
6,281,261	+				+2.6
6,281,261	+				+1.6
6,281,262	-				+0.5
6,281,262	-				+0.6
6,281,262	-				-1.0
6,281,262	-				-3.3
6,281,262	-				+0.6
6,281,262	-				+1.4
6,281,262	-				+1.1
6,281,263	+				+1.8
6,281,264	-				+1.6
6,281,264	-				+0.2
6,281,264	-				-1.4
6,281,269	+				-1.0
6,281,269	+				-0.4
6,281,269	+				+1.8
6,281,269	+				+0.4
6,281,269	+				+1.2
6,281,269	+				-0.1
6,281,270	-				+1.6
6,281,270	-				+1.0
6,281,270	-				-0.4
6,281,270	-				-0.8
6,281,289	+				+0.8
6,281,300	+				+3.7
6,281,300	+				-0.0
6,281,300	+				+2.6
6,281,300	+				-1.2
6,281,301	-				-1.2
6,281,321	+				-0.0
6,281,321	+				-0.8
6,281,321	+				-0.0
6,281,322	-				+1.6
6,281,322	-				+1.9
6,281,333	+				+1.6
6,281,333	+				+0.6
6,281,333	+				+2.6
6,281,333	+				+1.2
6,281,333	+				-1.3
6,281,334	-				+1.9
6,281,368	+				-1.4
6,281,368	+				-0.0
6,281,368	+				+1.1
6,281,368	+				+1.5
6,281,368	+				+1.1
6,281,368	+				-1.4
6,281,368	+				-1.8
6,281,368	+				+1.7
6,281,368	+				+1.8
6,281,368	+				+2.2
6,281,368	+				-2.0
6,281,369	-				-0.4
6,281,369	-				+2.2
6,281,369	-				+1.7
6,281,369	-				+1.7
6,281,369	-				-0.1
6,281,369	-				+2.3
6,281,369	-				-1.4
6,281,369	-				-0.4
6,281,369	-				+0.6
6,281,369	-				-1.8
6,281,369	-				+1.3
6,281,369	-				-0.0
6,281,369	-				-1.4
6,281,369	-				-0.8
6,281,372	+				-1.0
6,281,372	+				-2.1
6,281,372	+				+2.3
6,281,372	+				-0.0
6,281,372	+				-0.8
6,281,372	+				-0.4
6,281,373	-				+3.2
6,281,373	-				-1.9
6,281,373	-				+2.3
6,281,373	-				-1.8
6,281,373	-				-1.2
6,281,403	+				-0.4
6,281,462	-				+1.2
6,281,480	-				-1.8
6,281,490	-				+1.9
6,281,546	+				-1.4
6,281,546	+				+1.6
6,281,546	+				-1.4
6,281,546	+				+1.4
6,281,547	-				+2.0
6,281,547	-				+1.3
6,281,547	-				-1.8
6,281,575	+				-0.4
6,281,575	+				-1.1
6,281,627	+				-1.0
6,281,628	-				-1.2
6,281,649	-				-0.4
6,281,679	-				-1.0
6,281,696	+				-0.2
6,281,696	+				+0.7
6,281,697	-				-1.0
6,281,699	+				+0.6
6,281,699	+				+1.0
6,281,699	+				+1.6
6,281,700	-				+2.2
6,281,700	-				+0.6
6,281,700	-				+0.1
6,281,734	-				-1.0
6,281,734	-				-0.1