Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28855

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
6,276,902	+				-1.9
6,276,902	+				+0.6
6,276,902	+				+1.4
6,276,903	-				+0.7
6,276,938	+		AO353_28850	0.12	+0.7
6,276,938	+		AO353_28850	0.12	-1.2
6,276,938	+		AO353_28850	0.12	+0.3
6,276,938	+		AO353_28850	0.12	-1.2
6,276,939	-		AO353_28850	0.12	+0.8
6,276,939	-		AO353_28850	0.12	-0.0
6,276,980	+		AO353_28850	0.17	+0.9
6,276,980	+		AO353_28850	0.17	-1.0
6,276,980	+		AO353_28850	0.17	-1.2
6,276,981	-		AO353_28850	0.17	-1.4
6,276,981	-		AO353_28850	0.17	-0.0
6,276,981	-		AO353_28850	0.17	-0.8
6,277,248	+		AO353_28850	0.45	-1.6
6,277,249	-		AO353_28850	0.45	-0.0
6,277,268	+		AO353_28850	0.47	+0.6
6,277,414	+		AO353_28850	0.63	-0.3
6,277,414	+		AO353_28850	0.63	-1.0
6,277,414	+		AO353_28850	0.63	+1.1
6,277,414	+		AO353_28850	0.63	+0.8
6,277,414	+		AO353_28850	0.63	-1.2
6,277,414	+		AO353_28850	0.63	-0.4
6,277,415	-		AO353_28850	0.63	-0.4
6,277,415	-		AO353_28850	0.63	+1.6
6,277,415	-		AO353_28850	0.63	+1.2
6,277,415	-		AO353_28850	0.63	-0.0
6,277,415	-		AO353_28850	0.63	-2.7
6,277,415	-		AO353_28850	0.63	+0.3
6,277,439	+		AO353_28850	0.65	-0.0
6,277,478	+		AO353_28850	0.69	-1.2
6,277,478	+		AO353_28850	0.69	-0.8
6,277,478	+		AO353_28850	0.69	-1.4
6,277,479	-		AO353_28850	0.70	-1.8
6,277,535	-		AO353_28850	0.75	-0.0
6,277,567	-		AO353_28850	0.79	-1.8
6,277,567	-		AO353_28850	0.79	-0.4
6,277,648	+		AO353_28850	0.87	+1.2
6,277,649	-		AO353_28850	0.88	-1.9
6,277,649	-		AO353_28850	0.88	+1.6
6,277,649	-		AO353_28850	0.88	-1.0
6,277,759	+				-1.6
6,277,765	+				+1.3
6,277,814	+				-0.0
6,277,915	+				+1.7
6,277,915	+				-1.1
6,277,915	+				-2.6
6,277,916	-				+2.8
6,278,072	+		AO353_28855	0.17	-0.8
6,278,072	+		AO353_28855	0.17	-1.4
6,278,072	+		AO353_28855	0.17	-1.0
6,278,072	+		AO353_28855	0.17	+0.6
6,278,072	+		AO353_28855	0.17	-0.8
6,278,072	+		AO353_28855	0.17	+0.5
6,278,072	+		AO353_28855	0.17	+3.6
6,278,073	-		AO353_28855	0.17	-0.0
6,278,073	-		AO353_28855	0.17	-0.4
6,278,073	-		AO353_28855	0.17	-2.6
6,278,073	-		AO353_28855	0.17	+0.3
6,278,073	-		AO353_28855	0.17	-0.8
6,278,073	-		AO353_28855	0.17	+1.2
6,278,073	-		AO353_28855	0.17	-0.8
6,278,147	+		AO353_28855	0.23	-0.4
6,278,147	+		AO353_28855	0.23	-0.8
6,278,147	+		AO353_28855	0.23	+1.8
6,278,148	-		AO353_28855	0.23	-3.1
6,278,148	-		AO353_28855	0.23	-1.8
6,278,150	+		AO353_28855	0.24	-0.9
6,278,150	+		AO353_28855	0.24	+0.6
6,278,150	+		AO353_28855	0.24	-0.8
6,278,179	-		AO353_28855	0.26	+0.1
6,278,179	-		AO353_28855	0.26	-1.4
6,278,179	-		AO353_28855	0.26	+0.6
6,278,291	+		AO353_28855	0.35	-1.9
6,278,291	+		AO353_28855	0.35	+4.4
6,278,319	+		AO353_28855	0.38	-1.0
6,278,319	+		AO353_28855	0.38	-2.1
6,278,372	+		AO353_28855	0.42	-0.6
6,278,372	+		AO353_28855	0.42	-0.8
6,278,372	+		AO353_28855	0.42	+0.3
6,278,373	-		AO353_28855	0.42	+0.6
6,278,373	-		AO353_28855	0.42	+0.7
6,278,456	+				-0.0
6,278,456	+		AO353_28855	0.49	+1.3
6,278,457	-		AO353_28855	0.49	+3.2
6,278,457	-		AO353_28855	0.49	-1.4
6,278,457	-		AO353_28855	0.49	+3.7
6,278,458	+		AO353_28855	0.49	+0.3
6,278,458	+		AO353_28855	0.49	+1.1
6,278,458	+		AO353_28855	0.49	+0.8
6,278,458	+		AO353_28855	0.49	+2.1
6,278,458	+		AO353_28855	0.49	-0.8
6,278,458	+		AO353_28855	0.49	+2.8
6,278,458	+		AO353_28855	0.49	-1.9
6,278,458	+		AO353_28855	0.49	-2.1
6,278,458	+		AO353_28855	0.49	-1.9
6,278,458	+		AO353_28855	0.49	-0.4
6,278,458	+		AO353_28855	0.49	+2.2
6,278,458	+		AO353_28855	0.49	-0.8
6,278,459	-		AO353_28855	0.49	-0.4
6,278,459	-		AO353_28855	0.49	-1.6
6,278,581	+		AO353_28855	0.59	+0.8
6,278,581	+		AO353_28855	0.59	+1.6
6,278,582	-		AO353_28855	0.59	-1.4
6,278,582	-		AO353_28855	0.59	-0.8
6,278,590	+		AO353_28855	0.60	+1.6
6,278,590	+		AO353_28855	0.60	+1.6
6,278,590	+		AO353_28855	0.60	-1.0
6,278,590	+		AO353_28855	0.60	+2.0
6,278,590	+		AO353_28855	0.60	+0.7
6,278,590	+		AO353_28855	0.60	-1.0
6,278,590	+		AO353_28855	0.60	-0.0
6,278,590	+		AO353_28855	0.60	-1.8
6,278,590	+				-0.0
6,278,590	+		AO353_28855	0.60	-1.4
6,278,590	+		AO353_28855	0.60	+1.9
6,278,590	+		AO353_28855	0.60	+1.0
6,278,590	+		AO353_28855	0.60	+0.2
6,278,591	+		AO353_28855	0.60	+1.6
6,278,591	-		AO353_28855	0.60	-1.6
6,278,591	-		AO353_28855	0.60	+0.1
6,278,591	-		AO353_28855	0.60	-0.0
6,278,591	-		AO353_28855	0.60	+0.8
6,278,591	-		AO353_28855	0.60	+0.7
6,278,591	-		AO353_28855	0.60	+1.2
6,278,591	-		AO353_28855	0.60	+0.7
6,278,591	-		AO353_28855	0.60	-1.9
6,278,591	-		AO353_28855	0.60	-1.0
6,278,591	-				-0.0
6,278,591	-		AO353_28855	0.60	+2.5
6,278,592	+		AO353_28855	0.60	-0.0
6,278,592	+		AO353_28855	0.60	-1.3
6,278,592	+		AO353_28855	0.60	-1.8
6,278,592	+		AO353_28855	0.60	-0.8
6,278,592	+		AO353_28855	0.60	-2.8
6,278,592	+		AO353_28855	0.60	-0.8
6,278,592	+		AO353_28855	0.60	-1.4
6,278,592	+		AO353_28855	0.60	-0.0
6,278,592	+		AO353_28855	0.60	-0.8
6,278,592	+		AO353_28855	0.60	-1.9
6,278,592	+				+1.6
6,278,592	+		AO353_28855	0.60	-0.2
6,278,592	+		AO353_28855	0.60	-2.8
6,278,592	+		AO353_28855	0.60	-2.8
6,278,592	+		AO353_28855	0.60	-1.9
6,278,592	+		AO353_28855	0.60	+1.2
6,278,592	+				-0.0
6,278,592	+		AO353_28855	0.60	-1.2
6,278,592	+		AO353_28855	0.60	+0.5
6,278,592	+		AO353_28855	0.60	-1.4
6,278,592	+		AO353_28855	0.60	+2.5
6,278,592	+		AO353_28855	0.60	+2.1
6,278,593	-		AO353_28855	0.60	-0.0
6,278,593	-		AO353_28855	0.60	+1.9
6,278,593	-		AO353_28855	0.60	+0.2
6,278,593	-		AO353_28855	0.60	+0.6
6,278,593	-		AO353_28855	0.60	-1.0
6,278,593	-		AO353_28855	0.60	-0.0
6,278,593	-		AO353_28855	0.60	+0.6
6,278,593	-		AO353_28855	0.60	+1.8
6,278,593	-		AO353_28855	0.60	-1.8
6,278,593	-		AO353_28855	0.60	-0.8
6,278,593	-		AO353_28855	0.60	+0.5
6,278,593	-		AO353_28855	0.60	-1.4
6,278,593	-		AO353_28855	0.60	-1.0
6,278,593	-		AO353_28855	0.60	-1.2
6,278,593	-		AO353_28855	0.60	-0.3
6,278,593	-		AO353_28855	0.60	-2.6
6,278,593	-		AO353_28855	0.60	-0.4
6,278,593	-		AO353_28855	0.60	+0.8
6,278,593	-		AO353_28855	0.60	+0.6
6,278,593	-		AO353_28855	0.60	-0.4
6,278,596	+		AO353_28855	0.61	+2.9
6,278,596	+		AO353_28855	0.61	-1.0
6,278,596	+		AO353_28855	0.61	+1.6
6,278,596	+		AO353_28855	0.61	-0.0
6,278,596	+		AO353_28855	0.61	+1.8
6,278,596	+		AO353_28855	0.61	+2.2
6,278,596	+		AO353_28855	0.61	-1.4
6,278,596	+		AO353_28855	0.61	+0.6
6,278,596	+		AO353_28855	0.61	+1.9
6,278,596	+		AO353_28855	0.61	-0.0
6,278,596	+		AO353_28855	0.61	+1.6
6,278,596	+		AO353_28855	0.61	-1.2
6,278,597	-				-0.0
6,278,597	-		AO353_28855	0.61	-0.4
6,278,597	-		AO353_28855	0.61	-1.2
6,278,597	-		AO353_28855	0.61	-1.2
6,278,597	-		AO353_28855	0.61	-2.2
6,278,597	-		AO353_28855	0.61	-2.4
6,278,597	-		AO353_28855	0.61	-1.2
6,278,597	-		AO353_28855	0.61	-0.8
6,278,597	-		AO353_28855	0.61	+2.1
6,278,597	-		AO353_28855	0.61	-1.8
6,278,597	-		AO353_28855	0.61	+0.4
6,278,597	-		AO353_28855	0.61	-1.9
6,278,597	-		AO353_28855	0.61	+2.4
6,278,597	-		AO353_28855	0.61	+1.3
6,278,597	-		AO353_28855	0.61	-0.2
6,278,597	-		AO353_28855	0.61	+1.4
6,278,597	-		AO353_28855	0.61	-2.1
6,278,597	-		AO353_28855	0.61	+1.8
6,278,597	-		AO353_28855	0.61	+0.9
6,278,597	-		AO353_28855	0.61	-0.3
6,278,598	+		AO353_28855	0.61	-0.4
6,278,599	-		AO353_28855	0.61	+1.7
6,278,599	-		AO353_28855	0.61	+0.6
6,278,599	-		AO353_28855	0.61	-3.1
6,278,599	-		AO353_28855	0.61	+0.2
6,278,639	+		AO353_28855	0.64	-0.8
6,278,639	+		AO353_28855	0.64	+0.6
6,278,640	-		AO353_28855	0.64	+1.1
6,278,640	-		AO353_28855	0.64	-1.6
6,278,640	-		AO353_28855	0.64	-0.8
6,278,640	-		AO353_28855	0.64	-0.8
6,278,685	-		AO353_28855	0.68	+3.5
6,278,685	-		AO353_28855	0.68	+1.2
6,278,685	-		AO353_28855	0.68	+2.6
6,278,685	-		AO353_28855	0.68	-1.2
6,278,803	+		AO353_28855	0.78	+1.0
6,278,803	+		AO353_28855	0.78	-1.2
6,278,803	+		AO353_28855	0.78	+1.0
6,278,803	+		AO353_28855	0.78	-1.8
6,278,803	+		AO353_28855	0.78	-1.0
6,278,803	+		AO353_28855	0.78	+1.0
6,278,803	+		AO353_28855	0.78	-1.6
6,278,804	-		AO353_28855	0.78	-2.1
6,278,804	-				+0.6
6,278,804	-		AO353_28855	0.78	-2.2
6,278,804	-		AO353_28855	0.78	+2.2
6,278,804	-		AO353_28855	0.78	-2.6
6,278,804	-		AO353_28855	0.78	+0.7
6,278,804	-		AO353_28855	0.78	-1.2
6,278,852	+		AO353_28855	0.82	-0.5
6,278,853	-		AO353_28855	0.82	-0.4
6,278,895	+		AO353_28855	0.85	-0.9
6,278,896	-		AO353_28855	0.85	-0.4
6,278,991	+				+0.1
6,278,991	+				-0.4
6,278,992	-				+0.7
6,279,070	+				-0.2
6,279,074	+				-0.8
6,279,075	-				+2.2
6,279,075	-				+1.0
6,279,075	-				-0.8
6,279,075	-				-0.8
6,279,075	-				-1.9
6,279,126	-				+1.2
6,279,126	-				+1.6
6,279,218	+				+0.8
6,279,218	+				+0.7
6,279,218	+				-0.0
6,279,218	+				-0.2
6,279,218	+				-0.4
6,279,218	+				-0.0
6,279,218	+				-1.2
6,279,218	+				+0.4
6,279,218	+				-1.2
6,279,219	-				+1.6
6,279,219	-				+1.6
6,279,219	-				-1.2
6,279,219	-				-1.4
6,279,219	-				+3.1
6,279,219	-				+1.3
6,279,219	-				+1.6
6,279,219	-				-0.8
6,279,219	-				+0.6
6,279,219	-				-0.8
6,279,219	-				+0.7
6,279,219	-				+3.9
6,279,219	-				-0.4
6,279,222	+				-0.7
6,279,222	+				-0.5
6,279,223	-				-2.0
6,279,223	-				-0.0
6,279,223	-				+3.9
6,279,223	-				+0.1
6,279,225	+				-1.0
6,279,225	+				-1.0
6,279,225	+				+2.6
6,279,226	-				-1.0
6,279,226	-				+2.7
6,279,226	-				+0.8
6,279,231	+				-0.4
6,279,231	+				+1.6
6,279,231	+				-1.9
6,279,271	+				-0.6
6,279,271	+				-0.0
6,279,271	+				+1.2
6,279,271	+				-0.4
6,279,271	+				+1.1
6,279,271	+				-2.1
6,279,271	+				-0.8
6,279,272	-				-2.0
6,279,272	-				-0.0
6,279,272	-				+1.9
6,279,272	-				-2.2
6,279,272	-				+0.3
6,279,275	+				+1.0
6,279,275	+				-0.0
6,279,275	+				-0.8
6,279,275	+				-0.8
6,279,275	+				+3.6
6,279,275	+				+0.6
6,279,275	+				+0.9
6,279,275	+				+1.0
6,279,275	+				-0.0
6,279,275	+				-0.4
6,279,275	+				-3.1
6,279,276	-				-1.0
6,279,276	-				+1.0
6,279,276	-				+0.6
6,279,276	-				+2.2
6,279,276	-				-0.8
6,279,276	-				+3.6
6,279,276	-				-2.6
6,279,276	-				-2.1
6,279,276	-				+2.6
6,279,276	-				-2.2
6,279,276	-				-1.4
6,279,276	-				-0.8
6,279,276	-				-0.4
6,279,276	-				+1.8
6,279,311	-				+1.6
6,279,311	-				+2.1
6,279,324	+				-2.1
6,279,325	-				+1.2
6,279,371	+				-0.8
6,279,372	-				-0.8
6,279,372	-				+2.4
6,279,372	-				+0.6
6,279,375	+				+0.6
6,279,375	+				+1.9
6,279,375	+				+1.6
6,279,375	+				-0.8
6,279,375	+				-1.0
6,279,376	-				+1.6
6,279,376	-				-0.8
6,279,376	-				-1.6
6,279,376	-				-2.2
6,279,392	+				+0.8
6,279,392	+				-1.4
6,279,392	+				-0.3
6,279,392	+				-0.8
6,279,392	+				-0.0
6,279,392	+				-1.0
6,279,393	-				+2.2
6,279,393	-				-0.2
6,279,393	-				-0.1
6,279,393	-				-1.0
6,279,393	-				+1.9
6,279,393	-				-2.1
6,279,393	-				-0.8
6,279,436	+				+0.6
6,279,450	+				-0.1
6,279,450	+				-0.4
6,279,451	-				+0.6
6,279,613	+				-0.1
6,279,614	-				+0.6
6,279,637	+				+0.6
6,279,637	+				-1.8
6,279,637	+				-1.0
6,279,637	+				-0.4
6,279,637	+				+0.6
6,279,637	+				+3.7
6,279,637	+				-1.6
6,279,637	+				-0.4
6,279,637	+				-0.0
6,279,638	-				-0.2
6,279,638	-				-0.0
6,279,638	-				+2.6
6,279,638	-				-1.6
6,279,766	+				-0.8
6,279,766	+				-0.0
6,279,766	+				+1.3
6,279,766	+				-1.0
6,279,767	-				-0.4
6,279,767	-				-0.0
6,279,767	-				+2.4
6,279,767	-				+0.7
6,279,767	-				-0.0
6,279,767	-				+1.4
6,279,767	-				+1.2
6,279,805	+				+0.6
6,279,805	+				+0.8
6,279,834	-				-0.4
6,279,870	-				+1.4
6,279,927	+		AO353_28860	0.26	-0.0
6,279,927	+		AO353_28860	0.26	+1.6
6,279,927	+		AO353_28860	0.26	-1.8
6,279,928	-		AO353_28860	0.26	-1.0
6,279,938	+		AO353_28860	0.29	-1.6
6,279,938	+				-0.8
6,279,939	-		AO353_28860	0.29	+0.2
6,279,939	-		AO353_28860	0.29	+4.6
6,279,939	-		AO353_28860	0.29	-0.0
6,279,966	+		AO353_28860	0.38	-0.0
6,279,967	-		AO353_28860	0.38	-0.8
6,279,967	-		AO353_28860	0.38	-0.8
6,279,999	-		AO353_28860	0.48	-1.0