Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28635

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
6,236,536	+		AO353_28630	0.20	-1.6
6,236,537	-		AO353_28630	0.20	+0.6
6,236,537	-		AO353_28630	0.20	-1.4
6,236,537	-		AO353_28630	0.20	+0.2
6,236,702	-		AO353_28630	0.33	+1.1
6,236,704	+		AO353_28630	0.33	+2.0
6,236,705	-		AO353_28630	0.34	-1.0
6,236,929	+		AO353_28630	0.52	+1.7
6,236,929	+		AO353_28630	0.52	-0.0
6,236,929	+		AO353_28630	0.52	-1.2
6,236,930	-		AO353_28630	0.52	+0.2
6,236,930	-		AO353_28630	0.52	-0.4
6,236,930	-		AO353_28630	0.52	-0.2
6,236,930	-		AO353_28630	0.52	-1.0
6,236,930	-		AO353_28630	0.52	+1.6
6,236,988	+		AO353_28630	0.57	-1.9
6,236,988	+		AO353_28630	0.57	-1.2
6,236,988	+		AO353_28630	0.57	-1.0
6,236,988	+		AO353_28630	0.57	+1.0
6,236,989	-		AO353_28630	0.57	+2.4
6,236,989	-		AO353_28630	0.57	-0.2
6,236,989	-		AO353_28630	0.57	+2.1
6,236,989	-		AO353_28630	0.57	-0.1
6,236,989	-		AO353_28630	0.57	-1.8
6,237,264	+		AO353_28630	0.79	-1.6
6,237,264	+		AO353_28630	0.79	-0.4
6,237,264	+		AO353_28630	0.79	+3.6
6,237,265	-		AO353_28630	0.79	+3.1
6,237,370	+		AO353_28630	0.88	+0.8
6,237,371	-		AO353_28630	0.88	-1.0
6,237,371	-		AO353_28630	0.88	-1.0
6,237,371	-		AO353_28630	0.88	-1.1
6,237,643	-				-1.6
6,237,643	-				-2.3
6,237,645	+				+2.6
6,237,646	-				-1.0
6,237,646	-				-1.6
6,237,646	-				-0.8
6,237,646	-				-1.0
6,237,780	+		AO353_28635	0.12	+0.6
6,237,780	+		AO353_28635	0.12	+3.8
6,237,781	-		AO353_28635	0.12	+0.8
6,237,781	-		AO353_28635	0.12	+0.6
6,237,789	+		AO353_28635	0.12	+2.8
6,237,789	+		AO353_28635	0.12	+1.8
6,237,789	+		AO353_28635	0.12	-0.8
6,237,789	+		AO353_28635	0.12	-2.2
6,237,789	+		AO353_28635	0.12	-0.8
6,237,789	+		AO353_28635	0.12	-1.2
6,237,789	+		AO353_28635	0.12	+1.6
6,237,789	+		AO353_28635	0.12	+1.1
6,237,789	+		AO353_28635	0.12	+0.6
6,237,790	-		AO353_28635	0.12	+0.7
6,237,790	-		AO353_28635	0.12	-1.4
6,237,790	-		AO353_28635	0.12	-1.4
6,237,790	-		AO353_28635	0.12	+1.9
6,237,790	-		AO353_28635	0.12	-1.0
6,237,874	+		AO353_28635	0.16	+0.6
6,237,945	+		AO353_28635	0.19	+2.1
6,237,945	+		AO353_28635	0.19	-2.0
6,237,945	+		AO353_28635	0.19	+0.2
6,237,946	-		AO353_28635	0.19	-1.0
6,237,946	-		AO353_28635	0.19	-1.0
6,237,969	+		AO353_28635	0.20	-1.2
6,237,969	+		AO353_28635	0.20	+0.8
6,237,975	+		AO353_28635	0.20	+2.7
6,237,976	-		AO353_28635	0.20	-0.8
6,237,976	-		AO353_28635	0.20	+1.8
6,237,976	-		AO353_28635	0.20	+2.1
6,238,125	+		AO353_28635	0.27	+1.6
6,238,125	+		AO353_28635	0.27	-1.2
6,238,125	+		AO353_28635	0.27	-1.9
6,238,125	+		AO353_28635	0.27	+2.2
6,238,125	+		AO353_28635	0.27	-2.4
6,238,125	+		AO353_28635	0.27	-0.9
6,238,125	+		AO353_28635	0.27	-0.8
6,238,126	-		AO353_28635	0.27	-2.0
6,238,126	-		AO353_28635	0.27	+1.3
6,238,126	-		AO353_28635	0.27	-1.9
6,238,126	-		AO353_28635	0.27	+1.1
6,238,126	-		AO353_28635	0.27	-0.0
6,238,126	-		AO353_28635	0.27	-0.4
6,238,126	-		AO353_28635	0.27	+1.6
6,238,143	+		AO353_28635	0.27	+2.7
6,238,144	-		AO353_28635	0.27	-1.3
6,238,144	-		AO353_28635	0.27	+0.9
6,238,144	-		AO353_28635	0.27	+2.4
6,238,153	-		AO353_28635	0.28	-1.2
6,238,186	-		AO353_28635	0.29	-0.0
6,238,186	-		AO353_28635	0.29	+2.7
6,238,186	-		AO353_28635	0.29	+0.6
6,238,244	-		AO353_28635	0.32	+0.6
6,238,278	-		AO353_28635	0.33	-0.0
6,238,278	-		AO353_28635	0.33	+0.6
6,238,374	+		AO353_28635	0.37	+1.1
6,238,374	+		AO353_28635	0.37	-1.8
6,238,374	+		AO353_28635	0.37	-0.8
6,238,375	-		AO353_28635	0.37	-0.8
6,238,375	-		AO353_28635	0.37	-1.2
6,238,375	-		AO353_28635	0.37	+1.0
6,238,377	+		AO353_28635	0.37	-2.0
6,238,377	+		AO353_28635	0.37	+0.6
6,238,378	-		AO353_28635	0.37	+3.1
6,238,378	-		AO353_28635	0.37	+0.6
6,238,378	-		AO353_28635	0.37	-1.2
6,238,378	-		AO353_28635	0.37	+0.6
6,238,378	-		AO353_28635	0.37	+2.6
6,238,378	-		AO353_28635	0.37	+1.9
6,238,378	-		AO353_28635	0.37	+0.6
6,238,380	+		AO353_28635	0.38	-1.8
6,238,380	+		AO353_28635	0.38	-0.0
6,238,380	+		AO353_28635	0.38	-0.8
6,238,380	+		AO353_28635	0.38	+0.6
6,238,380	+		AO353_28635	0.38	+0.3
6,238,380	+		AO353_28635	0.38	-0.0
6,238,380	+		AO353_28635	0.38	+2.6
6,238,380	+		AO353_28635	0.38	-2.5
6,238,380	+		AO353_28635	0.38	+4.0
6,238,380	+		AO353_28635	0.38	-0.4
6,238,380	+		AO353_28635	0.38	-0.8
6,238,380	+		AO353_28635	0.38	-0.8
6,238,380	+		AO353_28635	0.38	+1.9
6,238,380	+		AO353_28635	0.38	-0.0
6,238,380	+		AO353_28635	0.38	+1.2
6,238,380	+		AO353_28635	0.38	-2.0
6,238,380	+		AO353_28635	0.38	-1.8
6,238,380	+		AO353_28635	0.38	-0.0
6,238,380	+		AO353_28635	0.38	-1.8
6,238,380	+		AO353_28635	0.38	+2.6
6,238,380	+		AO353_28635	0.38	-1.9
6,238,380	+		AO353_28635	0.38	-1.0
6,238,380	+		AO353_28635	0.38	-0.0
6,238,380	+		AO353_28635	0.38	-0.4
6,238,381	-		AO353_28635	0.38	-0.0
6,238,381	-		AO353_28635	0.38	-2.5
6,238,381	-		AO353_28635	0.38	+0.3
6,238,381	-		AO353_28635	0.38	-0.0
6,238,381	-		AO353_28635	0.38	-1.0
6,238,381	-		AO353_28635	0.38	-0.0
6,238,381	-		AO353_28635	0.38	+1.4
6,238,381	-		AO353_28635	0.38	-1.0
6,238,381	-		AO353_28635	0.38	+0.4
6,238,381	-		AO353_28635	0.38	+2.2
6,238,381	-		AO353_28635	0.38	-0.5
6,238,381	-		AO353_28635	0.38	-1.2
6,238,381	-		AO353_28635	0.38	+0.2
6,238,465	-		AO353_28635	0.41	-0.4
6,238,872	+		AO353_28635	0.59	+1.6
6,238,872	+		AO353_28635	0.59	+1.8
6,238,873	-		AO353_28635	0.59	-0.5
6,238,873	-		AO353_28635	0.59	-0.0
6,238,873	-		AO353_28635	0.59	-0.8
6,239,063	+		AO353_28635	0.67	-1.0
6,239,063	+		AO353_28635	0.67	+0.9
6,239,063	+		AO353_28635	0.67	-1.0
6,239,063	+		AO353_28635	0.67	+1.0
6,239,063	+		AO353_28635	0.67	-1.0
6,239,063	+		AO353_28635	0.67	-1.0
6,239,064	-		AO353_28635	0.67	-0.8
6,239,529	+		AO353_28635	0.87	-1.8
6,239,529	+		AO353_28635	0.87	+1.3
6,239,530	-		AO353_28635	0.87	+3.1
6,239,596	+		AO353_28635	0.90	-0.3
6,239,597	-		AO353_28635	0.90	-1.1
6,239,597	-		AO353_28635	0.90	-2.0
6,239,961	-				-0.8
6,240,032	+				+0.6
6,240,165	+				-0.0
6,240,166	-				-0.8
6,240,166	-				+0.1
6,240,223	+				+0.1
6,240,223	+				+2.4
6,240,224	-				+2.2
6,240,224	-				-3.0
6,240,224	-				+0.6
6,240,224	-				-0.3
6,240,224	-				-1.4
6,240,224	-				+0.4
6,240,259	+				-1.1
6,240,259	+				-1.6
6,240,260	-				-1.2
6,240,260	-				+2.3
6,240,260	-				+1.6
6,240,260	-				+1.2
6,240,320	+		AO353_28640	0.13	+3.4
6,240,321	-		AO353_28640	0.13	-0.4
6,240,321	-		AO353_28640	0.13	-1.6
6,240,328	+		AO353_28640	0.17	+0.8
6,240,328	+		AO353_28640	0.17	-1.0
6,240,348	-		AO353_28640	0.26	+1.6
6,240,348	-		AO353_28640	0.26	-0.8
6,240,348	-		AO353_28640	0.26	+1.6
6,240,444	+		AO353_28640	0.74	-1.4
6,240,445	-		AO353_28640	0.74	-0.6
6,240,445	-		AO353_28640	0.74	+1.0
6,240,496	-				+1.6
6,240,496	-				-2.7
6,240,516	+				+1.3
6,240,516	+				-1.8
6,240,516	+				-0.4
6,240,516	+				-0.0
6,240,517	-				+0.9
6,240,517	-				-1.2
6,240,517	-				+3.2
6,240,517	-				-1.8
6,240,517	-				-1.5
6,240,517	-				-0.0
6,240,517	-				-1.0
6,240,539	+				+0.6
6,240,539	+				-0.4
6,240,539	+				+0.6
6,240,540	-				-0.0
6,240,569	+				-0.3
6,240,569	+				+1.4
6,240,570	-				-0.4
6,240,570	-				-1.0
6,240,570	-				-1.2
6,240,570	-				+2.4
6,240,570	-				+1.6
6,240,594	+				-0.4
6,240,595	-				-1.8
6,240,595	-				-1.0
6,240,608	-				+1.6
6,240,608	-				+0.2
6,240,608	-				-3.1
6,240,608	-				-0.0
6,240,608	-				-1.6
6,240,608	-				+0.6
6,240,608	-				+1.2
6,240,631	-				-0.4
6,240,631	-				-1.9
6,240,631	-				-0.4
6,240,762	+		AO353_28645	0.16	-0.7
6,240,762	+		AO353_28645	0.16	+0.6
6,240,762	+		AO353_28645	0.16	-0.0
6,240,762	+		AO353_28645	0.16	-1.9
6,240,763	-		AO353_28645	0.16	-1.4
6,240,765	+		AO353_28645	0.16	+1.2
6,240,765	+		AO353_28645	0.16	-0.8
6,240,765	+		AO353_28645	0.16	-0.8
6,240,765	+		AO353_28645	0.16	-3.6
6,240,766	-		AO353_28645	0.16	-0.4
6,240,766	-		AO353_28645	0.16	-2.9
6,240,766	-		AO353_28645	0.16	+1.2
6,240,766	-		AO353_28645	0.16	+1.3
6,240,766	-		AO353_28645	0.16	-1.4
6,240,766	-		AO353_28645	0.16	-0.8
6,240,766	-		AO353_28645	0.16	-1.4
6,240,831	+		AO353_28645	0.23	-1.8
6,240,831	+		AO353_28645	0.23	-1.8
6,240,831	+		AO353_28645	0.23	-2.1
6,240,831	+		AO353_28645	0.23	-0.2
6,240,832	-		AO353_28645	0.23	+1.4