Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28140

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
6,133,288	+		AO353_28130	0.73	-2.0
6,133,288	+		AO353_28130	0.73	+1.4
6,133,288	+		AO353_28130	0.73	+3.1
6,133,288	+		AO353_28130	0.73	-1.8
6,133,289	-		AO353_28130	0.74	+0.8
6,133,289	-		AO353_28130	0.74	-1.0
6,133,291	+		AO353_28130	0.74	-0.5
6,133,291	+		AO353_28130	0.74	-0.8
6,133,291	+		AO353_28130	0.74	-0.5
6,133,291	+		AO353_28130	0.74	+1.5
6,133,291	+		AO353_28130	0.74	+1.5
6,133,291	+		AO353_28130	0.74	+1.5
6,133,292	-		AO353_28130	0.74	-0.5
6,133,292	-		AO353_28130	0.74	-0.5
6,133,292	-		AO353_28130	0.74	+0.4
6,133,292	-		AO353_28130	0.74	-0.4
6,133,292	-		AO353_28130	0.74	-0.0
6,133,292	-		AO353_28130	0.74	-1.8
6,133,392	+		AO353_28130	0.84	-0.5
6,133,447	+		AO353_28130	0.89	+1.1
6,133,448	-		AO353_28130	0.89	-0.7
6,133,557	+				+2.9
6,133,557	+				+2.0
6,133,557	+				+0.5
6,133,558	-				-0.5
6,133,558	-				-1.3
6,133,558	-				-1.3
6,133,635	+		AO353_28135	0.11	+1.4
6,133,635	+		AO353_28135	0.11	+2.5
6,133,635	+		AO353_28135	0.11	+0.5
6,133,635	+		AO353_28135	0.11	-1.6
6,133,635	+		AO353_28135	0.11	-0.8
6,133,635	+		AO353_28135	0.11	+1.7
6,133,635	+		AO353_28135	0.11	-0.5
6,133,635	+		AO353_28135	0.11	-0.8
6,133,635	+		AO353_28135	0.11	-0.8
6,133,635	+		AO353_28135	0.11	-0.0
6,133,635	+		AO353_28135	0.11	+0.5
6,133,635	+		AO353_28135	0.11	-1.3
6,133,636	-		AO353_28135	0.11	-1.0
6,133,636	-		AO353_28135	0.11	+1.9
6,133,636	-		AO353_28135	0.11	-1.9
6,133,636	-		AO353_28135	0.11	+1.9
6,133,636	-		AO353_28135	0.11	+0.1
6,133,636	-		AO353_28135	0.11	-1.0
6,133,636	-		AO353_28135	0.11	+2.9
6,133,636	-		AO353_28135	0.11	-2.0
6,133,636	-		AO353_28135	0.11	-0.0
6,133,665	+		AO353_28135	0.16	-1.8
6,133,917	+		AO353_28135	0.52	+0.7
6,133,917	+		AO353_28135	0.52	-0.0
6,133,917	+		AO353_28135	0.52	+3.0
6,133,917	+		AO353_28135	0.52	-2.9
6,133,918	-		AO353_28135	0.52	+1.1
6,133,918	-		AO353_28135	0.52	-1.3
6,133,918	-		AO353_28135	0.52	+0.5
6,133,918	-		AO353_28135	0.52	+0.9
6,133,918	-		AO353_28135	0.52	+1.2
6,133,918	-		AO353_28135	0.52	+2.0
6,133,953	+		AO353_28135	0.57	-0.6
6,133,953	+		AO353_28135	0.57	-0.0
6,133,953	+		AO353_28135	0.57	+3.7
6,133,953	+		AO353_28135	0.57	+1.1
6,133,953	+		AO353_28135	0.57	-1.0
6,133,954	-		AO353_28135	0.57	+0.5
6,133,954	-		AO353_28135	0.57	+1.7
6,133,954	-		AO353_28135	0.57	+0.7
6,133,954	-		AO353_28135	0.57	-0.5
6,133,954	-		AO353_28135	0.57	-0.0
6,133,954	-		AO353_28135	0.57	+0.7
6,133,954	-		AO353_28135	0.57	+0.8
6,133,954	-		AO353_28135	0.57	+1.5
6,133,954	-		AO353_28135	0.57	+1.0
6,133,954	-		AO353_28135	0.57	-0.0
6,133,974	+		AO353_28135	0.60	-1.8
6,133,974	+		AO353_28135	0.60	+0.3
6,133,975	-		AO353_28135	0.60	-0.8
6,133,975	-		AO353_28135	0.60	-0.5
6,133,975	-		AO353_28135	0.60	-0.6
6,134,037	+		AO353_28135	0.69	-0.0
6,134,037	+		AO353_28135	0.69	-1.5
6,134,037	+		AO353_28135	0.69	-1.0
6,134,038	-		AO353_28135	0.69	-0.8
6,134,038	-		AO353_28135	0.69	-1.0
6,134,038	-		AO353_28135	0.69	+1.5
6,134,038	-		AO353_28135	0.69	+0.5
6,134,038	-		AO353_28135	0.69	+2.3
6,134,046	+		AO353_28135	0.70	-0.0
6,134,047	-		AO353_28135	0.70	-0.8
6,134,047	-		AO353_28135	0.70	-1.3
6,134,047	-		AO353_28135	0.70	-1.8
6,134,088	+		AO353_28135	0.76	+4.4
6,134,088	+		AO353_28135	0.76	-2.4
6,134,088	+		AO353_28135	0.76	+0.5
6,134,088	+		AO353_28135	0.76	-1.4
6,134,088	+		AO353_28135	0.76	-2.5
6,134,089	-		AO353_28135	0.76	+1.9
6,134,089	-		AO353_28135	0.76	+1.0
6,134,089	-		AO353_28135	0.76	+1.5
6,134,117	-		AO353_28135	0.80	-1.8
6,134,117	-		AO353_28135	0.80	-1.3
6,134,117	-		AO353_28135	0.80	+1.8
6,134,117	-		AO353_28135	0.80	+1.5
6,134,117	-		AO353_28135	0.80	-1.0
6,134,238	-				+2.5
6,134,238	-				+1.5
6,134,289	+				+2.4
6,134,289	+				-1.9
6,134,289	+				+1.5
6,134,290	-				-0.8
6,134,290	-				-0.0
6,134,315	+				-3.2
6,134,315	+				+0.5
6,134,315	+				-1.5
6,134,316	-				+1.0
6,134,316	-				+1.0
6,134,339	+		AO353_28140	0.11	-2.7
6,134,339	+		AO353_28140	0.11	-0.8
6,134,339	+		AO353_28140	0.11	-2.4
6,134,339	+		AO353_28140	0.11	-0.0
6,134,340	-		AO353_28140	0.11	-1.3
6,134,340	-		AO353_28140	0.11	-1.5
6,134,340	-		AO353_28140	0.11	-1.3
6,134,340	-		AO353_28140	0.11	+0.5
6,134,340	-		AO353_28140	0.11	+0.5
6,134,340	-		AO353_28140	0.11	+1.0
6,134,340	-		AO353_28140	0.11	-0.5
6,134,342	+		AO353_28140	0.11	-0.0
6,134,342	+		AO353_28140	0.11	-0.0
6,134,342	+		AO353_28140	0.11	+1.5
6,134,342	+		AO353_28140	0.11	+1.7
6,134,342	+		AO353_28140	0.11	-1.9
6,134,342	+		AO353_28140	0.11	-1.6
6,134,343	-		AO353_28140	0.12	+0.8
6,134,343	-		AO353_28140	0.12	+0.4
6,134,343	-		AO353_28140	0.12	+2.2
6,134,343	-		AO353_28140	0.12	+0.8
6,134,343	-		AO353_28140	0.12	+0.7
6,134,343	-		AO353_28140	0.12	+1.5
6,134,343	-		AO353_28140	0.12	+2.0
6,134,343	-		AO353_28140	0.12	+0.8
6,134,363	+		AO353_28140	0.14	+1.0
6,134,363	+		AO353_28140	0.14	-1.0
6,134,363	+		AO353_28140	0.14	+3.3
6,134,364	-		AO353_28140	0.15	+0.4
6,134,364	-		AO353_28140	0.15	-0.0
6,134,375	+		AO353_28140	0.16	-1.3
6,134,376	-		AO353_28140	0.16	-2.6
6,134,376	-		AO353_28140	0.16	+1.5
6,134,376	-		AO353_28140	0.16	+2.3
6,134,411	+		AO353_28140	0.21	-1.5
6,134,411	+		AO353_28140	0.21	-2.4
6,134,412	-		AO353_28140	0.21	+1.5
6,134,412	-		AO353_28140	0.21	+3.7
6,134,412	-		AO353_28140	0.21	-1.3
6,134,499	-		AO353_28140	0.33	-2.2
6,134,624	+		AO353_28140	0.51	-0.8
6,134,625	-		AO353_28140	0.51	-1.3
6,134,735	+		AO353_28140	0.67	-1.5
6,134,735	+		AO353_28140	0.67	-0.5
6,134,735	+		AO353_28140	0.67	-0.7
6,134,735	+		AO353_28140	0.67	-0.0
6,134,735	+		AO353_28140	0.67	-0.5
6,134,736	-		AO353_28140	0.67	+0.8
6,134,736	-		AO353_28140	0.67	-0.0
6,134,736	-		AO353_28140	0.67	-1.5
6,134,736	-		AO353_28140	0.67	+0.4
6,134,736	-		AO353_28140	0.67	-2.0
6,134,736	-		AO353_28140	0.67	-0.6
6,134,736	-		AO353_28140	0.67	-0.0
6,134,736	-		AO353_28140	0.67	+3.8
6,134,738	+		AO353_28140	0.67	-1.3
6,134,738	+		AO353_28140	0.67	-0.8
6,134,739	-		AO353_28140	0.67	+0.4
6,134,790	-		AO353_28140	0.74	-1.9
6,134,790	-		AO353_28140	0.74	+1.0
6,134,790	-		AO353_28140	0.74	+1.5
6,134,888	-		AO353_28140	0.88	+3.7
6,135,109	+				-0.3
6,135,109	+				-1.0
6,135,109	+				+1.1
6,135,110	-				+3.1
6,135,110	-				+2.1
6,135,122	+				+3.9
6,135,123	-				-0.5
6,135,152	+				-0.8
6,135,173	+				-1.9
6,135,174	-				+2.4
6,135,281	+		AO353_28145	0.20	+1.8
6,135,281	+		AO353_28145	0.20	+0.5
6,135,416	+		AO353_28145	0.38	+1.5
6,135,417	-		AO353_28145	0.38	+1.7
6,135,417	-		AO353_28145	0.38	+1.5
6,135,417	-		AO353_28145	0.38	+0.5
6,135,417	-		AO353_28145	0.38	-0.4
6,135,417	-		AO353_28145	0.38	+0.7
6,135,419	+		AO353_28145	0.38	-0.8
6,135,419	+		AO353_28145	0.38	-0.0
6,135,419	+		AO353_28145	0.38	+3.1
6,135,419	+		AO353_28145	0.38	-0.5
6,135,420	-		AO353_28145	0.38	+1.9
6,135,443	+		AO353_28145	0.41	-2.5
6,135,443	+		AO353_28145	0.41	+1.5
6,135,444	-		AO353_28145	0.41	-1.5
6,135,444	-		AO353_28145	0.41	+3.0
6,135,444	-		AO353_28145	0.41	-3.0
6,135,444	-		AO353_28145	0.41	-1.2
6,135,446	+		AO353_28145	0.42	-0.0
6,135,446	+		AO353_28145	0.42	+0.8
6,135,446	+		AO353_28145	0.42	-1.3
6,135,446	+		AO353_28145	0.42	-0.8
6,135,447	-		AO353_28145	0.42	+0.7
6,135,447	-		AO353_28145	0.42	-0.5
6,135,447	-		AO353_28145	0.42	+1.4
6,135,447	-		AO353_28145	0.42	-0.0
6,135,459	-		AO353_28145	0.43	+2.2
6,135,518	+		AO353_28145	0.51	+3.0
6,135,570	-		AO353_28145	0.57	-1.3
6,135,570	-		AO353_28145	0.57	+1.5
6,135,572	+		AO353_28145	0.58	-2.9
6,135,635	-		AO353_28145	0.66	-1.0
6,135,635	-		AO353_28145	0.66	+2.5
6,135,856	+				-1.3
6,135,923	+				-0.7
6,135,924	-				-1.5
6,135,928	+				+0.5
6,135,928	+				-1.0
6,135,928	+				-1.9
6,135,928	+				+0.5
6,135,929	-				-0.2
6,135,929	-				-1.3
6,135,929	-				-1.8
6,135,929	-				-0.0