Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_27880

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
6,081,839	+				-2.2
6,081,840	-				+1.5
6,081,862	+				-0.8
6,081,863	-				-1.9
6,081,863	-				+0.8
6,081,863	-				-1.8
6,081,863	-				-1.3
6,081,863	-				+1.6
6,081,873	+				-1.1
6,081,873	+				+1.2
6,081,874	-				+0.3
6,081,874	-				-1.3
6,081,874	-				-0.8
6,081,874	-				-0.5
6,082,058	-		AO353_27875	0.19	-0.1
6,082,058	-		AO353_27875	0.19	+0.3
6,082,090	+		AO353_27875	0.23	-0.2
6,082,104	+		AO353_27875	0.25	+1.7
6,082,104	+		AO353_27875	0.25	-0.1
6,082,104	+		AO353_27875	0.25	-3.0
6,082,104	+		AO353_27875	0.25	-2.4
6,082,104	+		AO353_27875	0.25	-0.8
6,082,105	-		AO353_27875	0.25	-0.1
6,082,105	-		AO353_27875	0.25	-0.1
6,082,105	-		AO353_27875	0.25	-1.3
6,082,105	-		AO353_27875	0.25	-0.1
6,082,291	+		AO353_27875	0.48	+0.6
6,082,291	+		AO353_27875	0.48	-1.5
6,082,291	+		AO353_27875	0.48	+1.2
6,082,291	+		AO353_27875	0.48	-2.2
6,082,292	-		AO353_27875	0.48	+3.6
6,082,764	-				+0.8
6,082,764	-				-2.7
6,082,764	-				+0.5
6,082,785	+				-1.1
6,082,785	+				-1.7
6,082,785	+				-0.2
6,082,785	+				+1.1
6,082,785	+				+0.8
6,082,786	-				-1.8
6,082,786	-				+0.5
6,082,786	-				-0.1
6,083,404	+		AO353_27880	0.43	+1.8
6,083,404	+		AO353_27880	0.43	-1.3
6,083,404	+		AO353_27880	0.43	+1.4
6,083,404	+		AO353_27880	0.43	-1.5
6,083,404	+		AO353_27880	0.43	+0.5
6,083,404	+		AO353_27880	0.43	-1.1
6,083,404	+		AO353_27880	0.43	-2.1
6,083,404	+		AO353_27880	0.43	-1.9
6,083,405	-		AO353_27880	0.43	+0.7
6,083,405	-		AO353_27880	0.43	-2.3
6,083,405	-				-0.5
6,083,405	-		AO353_27880	0.43	-1.8
6,083,405	-		AO353_27880	0.43	+0.4
6,083,542	+		AO353_27880	0.53	+3.3
6,083,542	+		AO353_27880	0.53	-1.1
6,083,542	+		AO353_27880	0.53	-1.7
6,083,542	+		AO353_27880	0.53	-1.3
6,083,542	+		AO353_27880	0.53	-1.1
6,083,543	-		AO353_27880	0.53	-0.1
6,083,630	-		AO353_27880	0.60	+1.8
6,083,650	+		AO353_27880	0.61	+0.5
6,083,650	+		AO353_27880	0.61	-1.5
6,083,650	+		AO353_27880	0.61	+0.5
6,083,650	+		AO353_27880	0.61	-2.2
6,083,651	-		AO353_27880	0.62	-0.1
6,083,651	-		AO353_27880	0.62	+1.5
6,083,651	-		AO353_27880	0.62	-1.1
6,083,656	+		AO353_27880	0.62	-0.1
6,083,656	+				+0.5
6,083,657	-		AO353_27880	0.62	-1.8
6,083,752	-		AO353_27880	0.69	+1.3
6,083,920	+		AO353_27880	0.82	-2.3
6,083,921	-		AO353_27880	0.82	-0.5
6,083,921	-		AO353_27880	0.82	+1.5
6,083,924	+		AO353_27880	0.82	+5.3
6,083,925	-		AO353_27880	0.82	+0.5
6,083,925	-		AO353_27880	0.82	+2.0
6,083,925	-		AO353_27880	0.82	-1.1
6,083,954	+		AO353_27880	0.84	+0.7
6,083,954	+		AO353_27880	0.84	-1.8
6,083,954	+		AO353_27880	0.84	-2.2
6,083,955	-		AO353_27880	0.84	-0.5
6,083,955	-		AO353_27880	0.84	+0.5
6,083,955	-		AO353_27880	0.84	-0.4
6,084,202	+				+0.3
6,084,202	+				+2.5
6,084,202	+				-1.8
6,084,203	-				-1.3
6,084,206	+				+0.1
6,084,206	+				-1.0
6,084,206	+				+2.5
6,084,206	+				-0.1
6,084,206	+				+0.5
6,084,206	+				-1.9
6,084,206	+				+1.9
6,084,206	+				-2.3
6,084,206	+				+2.0
6,084,206	+				-1.1
6,084,207	-				-0.3
6,084,207	-				+0.6
6,084,207	-				-0.5
6,084,207	-				-0.1
6,084,259	+		AO353_27885	0.11	-1.6
6,084,332	+		AO353_27885	0.20	-1.6
6,084,333	-		AO353_27885	0.21	-0.8
6,084,333	-		AO353_27885	0.21	-2.5
6,084,365	+		AO353_27885	0.25	-0.1
6,084,543	+		AO353_27885	0.48	-1.5
6,084,543	+		AO353_27885	0.48	+2.1
6,084,544	-		AO353_27885	0.48	+0.6
6,084,544	-		AO353_27885	0.48	-0.1
6,084,544	-				+1.5
6,084,544	-		AO353_27885	0.48	+0.4
6,084,544	-		AO353_27885	0.48	-1.2
6,084,544	-		AO353_27885	0.48	-1.3
6,084,544	-		AO353_27885	0.48	-1.5
6,084,593	+		AO353_27885	0.54	-1.5
6,084,593	+		AO353_27885	0.54	-0.8
6,084,593	+		AO353_27885	0.54	-1.5
6,084,593	+		AO353_27885	0.54	-0.5
6,084,593	+		AO353_27885	0.54	-0.5
6,084,594	-		AO353_27885	0.55	+1.6
6,084,594	-		AO353_27885	0.55	-0.8
6,084,594	-		AO353_27885	0.55	-1.3
6,084,713	+		AO353_27885	0.70	+1.5
6,084,714	-		AO353_27885	0.70	+1.9
6,084,714	-		AO353_27885	0.70	-1.5
6,084,780	+		AO353_27885	0.79	-0.8
6,084,780	+		AO353_27885	0.79	+0.7
6,084,780	+		AO353_27885	0.79	-1.6
6,084,780	+		AO353_27885	0.79	-1.8
6,084,781	-		AO353_27885	0.79	+1.8
6,084,782	+		AO353_27885	0.79	-0.5
6,084,782	+		AO353_27885	0.79	+2.9
6,084,782	+		AO353_27885	0.79	-0.1
6,084,782	+		AO353_27885	0.79	-0.5
6,084,782	+		AO353_27885	0.79	+0.3
6,084,782	+		AO353_27885	0.79	-0.5
6,084,782	+		AO353_27885	0.79	+2.9
6,084,782	+		AO353_27885	0.79	+2.4
6,084,783	-		AO353_27885	0.79	+2.5
6,084,783	-		AO353_27885	0.79	+0.5
6,084,783	-		AO353_27885	0.79	-0.8
6,084,783	-		AO353_27885	0.79	-1.3
6,084,783	-		AO353_27885	0.79	+0.5
6,084,783	-		AO353_27885	0.79	+0.3
6,084,783	-		AO353_27885	0.79	-0.8
6,084,896	+				-1.8
6,084,896	+				+1.5
6,084,897	-				-0.8
6,084,897	-				+0.8
6,084,897	-				+1.5
6,084,932	-				-2.2
6,084,932	-				+0.7
6,084,989	+				+1.4
6,084,990	-				+0.5
6,084,990	-				+1.9
6,085,011	-				-1.6
6,085,019	+				+1.8
6,085,019	+				+2.1
6,085,020	-				-1.3
6,085,020	-				+2.2
6,085,032	+				-1.4
6,085,032	+				-0.5
6,085,033	-				-1.1
6,085,033	-				-0.5
6,085,033	-				+0.7
6,085,088	+				+2.1
6,085,128	-				+0.5
6,085,128	-				+1.2
6,085,128	-				-2.0
6,085,132	+				-1.6
6,085,132	+				-1.5
6,085,133	-				-0.8
6,085,141	+				+2.1
6,085,142	-				-2.3
6,085,145	+				-1.9
6,085,146	-				-0.0
6,085,146	-				+1.7
6,085,154	-				-0.5