Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_26595

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
5,822,471	+		AO353_26585	0.20	-0.2
5,822,471	+		AO353_26585	0.20	+0.2
5,822,498	+		AO353_26585	0.24	+1.4
5,822,498	+		AO353_26585	0.24	-2.2
5,822,498	+		AO353_26585	0.24	-0.2
5,822,499	-		AO353_26585	0.24	+3.9
5,822,499	-		AO353_26585	0.24	+0.4
5,822,499	-		AO353_26585	0.24	-2.7
5,822,499	-		AO353_26585	0.24	+0.6
5,822,499	-		AO353_26585	0.24	+0.4
5,822,499	-		AO353_26585	0.24	+2.6
5,822,499	-		AO353_26585	0.24	-1.7
5,822,499	-		AO353_26585	0.24	+0.4
5,822,499	-		AO353_26585	0.24	+2.8
5,822,699	+		AO353_26585	0.57	-2.0
5,822,699	+		AO353_26585	0.57	-2.4
5,822,699	+		AO353_26585	0.57	+1.4
5,822,699	+		AO353_26585	0.57	-0.9
5,822,700	-		AO353_26585	0.57	-1.2
5,822,700	-		AO353_26585	0.57	+0.7
5,822,700	-		AO353_26585	0.57	+1.2
5,822,792	+		AO353_26585	0.72	-1.1
5,822,792	+		AO353_26585	0.72	-1.2
5,822,792	+		AO353_26585	0.72	-0.4
5,822,793	-		AO353_26585	0.72	-0.2
5,822,793	-		AO353_26585	0.72	-1.4
5,822,816	+		AO353_26585	0.76	+0.4
5,822,817	-		AO353_26585	0.76	+1.7
5,822,817	-		AO353_26585	0.76	+0.4
5,822,817	-		AO353_26585	0.76	+3.5
5,822,817	-				-0.2
5,822,819	+		AO353_26585	0.76	+0.9
5,822,819	+		AO353_26585	0.76	+0.8
5,822,819	+		AO353_26585	0.76	-1.9
5,822,819	+		AO353_26585	0.76	+0.9
5,822,819	+		AO353_26585	0.76	+0.8
5,822,820	-		AO353_26585	0.76	-1.6
5,822,820	-		AO353_26585	0.76	-0.8
5,822,820	-		AO353_26585	0.76	-0.2
5,822,820	-		AO353_26585	0.76	+0.4
5,822,820	-		AO353_26585	0.76	+0.4
5,822,935	-				+1.7
5,823,000	+				-1.7
5,823,000	+				+0.0
5,823,001	-				+2.2
5,823,001	-				-0.9
5,823,001	-				-0.4
5,823,031	+				-1.2
5,823,047	+				+1.6
5,823,047	+				+0.8
5,823,048	-				-0.6
5,823,048	-				-1.2
5,823,051	+				+2.0
5,823,051	+				-0.9
5,823,051	+				-1.5
5,823,051	+				-1.2
5,823,051	+				+0.6
5,823,051	+				-1.2
5,823,052	-				+0.4
5,823,052	-				+2.9
5,823,052	-				-1.4
5,823,052	-				-1.2
5,823,052	-				+2.6
5,823,052	-				-1.4
5,823,052	-				-1.2
5,823,052	-				+0.4
5,823,052	-				-1.9
5,823,052	-				-1.4
5,823,080	+				-0.9
5,823,080	+				+1.0
5,823,080	+				+1.8
5,823,080	+				-0.6
5,823,080	+				+1.1
5,823,081	-				+0.9
5,823,081	-				-0.6
5,823,160	+		AO353_26590	0.18	+2.4
5,823,226	+		AO353_26590	0.36	+0.4
5,823,226	+		AO353_26590	0.36	-0.2
5,823,227	-		AO353_26590	0.37	-0.6
5,823,381	+		AO353_26590	0.79	-0.2
5,823,381	+		AO353_26590	0.79	+2.1
5,823,381	+		AO353_26590	0.79	+0.3
5,823,381	+		AO353_26590	0.79	-0.9
5,823,381	+		AO353_26590	0.79	+0.4
5,823,381	+		AO353_26590	0.79	-0.2
5,823,381	+		AO353_26590	0.79	+0.7
5,823,381	+		AO353_26590	0.79	-2.0
5,823,381	+		AO353_26590	0.79	+1.4
5,823,382	-		AO353_26590	0.79	-1.2
5,823,382	-		AO353_26590	0.79	+1.4
5,823,382	-		AO353_26590	0.79	+0.2
5,823,419	+		AO353_26590	0.89	-3.1
5,823,419	+		AO353_26590	0.89	-0.9
5,823,419	+		AO353_26590	0.89	-0.1
5,823,420	-		AO353_26590	0.89	-1.0
5,823,435	+				+2.0
5,823,435	+				-1.4
5,823,435	+				-1.6
5,823,435	+				-0.2
5,823,436	-				-0.9
5,823,830	+		AO353_26595	0.42	-2.7
5,823,830	+		AO353_26595	0.42	-0.6
5,823,830	+		AO353_26595	0.42	-2.9
5,823,830	+		AO353_26595	0.42	+0.5
5,823,830	+		AO353_26595	0.42	-1.6
5,823,831	-		AO353_26595	0.42	-0.2
5,823,831	-		AO353_26595	0.42	-0.6
5,823,831	-		AO353_26595	0.42	-0.6
5,823,831	-		AO353_26595	0.42	-2.3
5,823,831	-		AO353_26595	0.42	-1.7
5,823,831	-		AO353_26595	0.42	-1.7
5,823,831	-		AO353_26595	0.42	-1.7
5,823,831	-		AO353_26595	0.42	+0.4
5,824,310	+				-0.6
5,824,310	+				-1.6
5,824,310	+				-0.2
5,824,310	+				+1.0
5,824,311	-				+1.2
5,824,311	-				-1.4
5,824,311	-				-2.3
5,824,311	-				-1.2
5,824,409	+				-0.2
5,824,409	+				-1.2
5,824,409	+				-2.2
5,824,574	+		AO353_26600	0.18	-1.4
5,824,574	+		AO353_26600	0.18	+1.6
5,824,574	+		AO353_26600	0.18	+0.4
5,824,574	+		AO353_26600	0.18	+1.8
5,824,574	+		AO353_26600	0.18	+1.4
5,824,575	-		AO353_26600	0.18	-1.7
5,824,575	-		AO353_26600	0.18	+2.0
5,824,575	-		AO353_26600	0.18	-0.7
5,824,575	-		AO353_26600	0.18	-1.7
5,824,575	-		AO353_26600	0.18	-0.2
5,824,628	+		AO353_26600	0.22	+2.2
5,824,629	-		AO353_26600	0.22	+0.7
5,824,735	+		AO353_26600	0.32	+0.4
5,824,736	-		AO353_26600	0.32	+0.1
5,825,016	-		AO353_26600	0.56	+1.4
5,825,182	+		AO353_26600	0.70	-1.6
5,825,182	+		AO353_26600	0.70	+2.3
5,825,182	+		AO353_26600	0.70	-1.2
5,825,182	+		AO353_26600	0.70	-1.6
5,825,183	-		AO353_26600	0.70	-1.2
5,825,183	-		AO353_26600	0.70	-1.2
5,825,260	+		AO353_26600	0.77	-0.6
5,825,289	+		AO353_26600	0.80	+1.4
5,825,290	-		AO353_26600	0.80	-0.2