Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_25720

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
5,670,417	+		AO353_25715	0.30	+1.3
5,670,417	+		AO353_25715	0.30	+0.4
5,670,418	-		AO353_25715	0.30	+0.4
5,670,435	+		AO353_25715	0.31	+1.4
5,670,435	+		AO353_25715	0.31	+1.1
5,670,637	+		AO353_25715	0.48	-1.0
5,670,637	+		AO353_25715	0.48	+0.0
5,670,637	+		AO353_25715	0.48	-0.6
5,670,637	+		AO353_25715	0.48	+0.2
5,670,637	+		AO353_25715	0.48	-1.2
5,670,637	+		AO353_25715	0.48	+4.4
5,670,637	+		AO353_25715	0.48	-2.1
5,670,637	+				-0.6
5,670,637	+		AO353_25715	0.48	-1.2
5,670,637	+		AO353_25715	0.48	-1.0
5,670,637	+		AO353_25715	0.48	-0.1
5,670,638	-		AO353_25715	0.48	-1.0
5,670,638	-		AO353_25715	0.48	+0.0
5,670,638	-		AO353_25715	0.48	-0.2
5,670,638	-		AO353_25715	0.48	+0.8
5,670,638	-		AO353_25715	0.48	-1.8
5,670,658	+		AO353_25715	0.50	+0.4
5,670,658	+		AO353_25715	0.50	-1.0
5,670,659	-		AO353_25715	0.50	-0.2
5,670,708	+		AO353_25715	0.54	-1.6
5,670,709	-		AO353_25715	0.54	+2.3
5,670,727	+		AO353_25715	0.56	-0.2
5,670,728	-		AO353_25715	0.56	+1.7
5,670,728	-		AO353_25715	0.56	-0.5
5,670,728	-		AO353_25715	0.56	-2.9
5,670,781	+		AO353_25715	0.60	-1.0
5,670,940	-		AO353_25715	0.73	+0.4
5,670,941	+		AO353_25715	0.74	+2.2
5,670,942	-		AO353_25715	0.74	-0.6
5,670,942	-		AO353_25715	0.74	-0.1
5,670,942	-		AO353_25715	0.74	-3.0
5,670,942	-		AO353_25715	0.74	-1.0
5,670,942	-		AO353_25715	0.74	-1.5
5,670,971	-		AO353_25715	0.76	-2.7
5,671,142	-				+0.4
5,671,150	+				-1.6
5,671,150	+				-0.6
5,671,253	+				+3.4
5,671,254	-				-2.1
5,671,254	-				+0.4
5,671,269	+				+3.9
5,671,269	+				-1.5
5,671,286	+				-1.5
5,671,317	-				-0.5
5,671,317	-				-1.0
5,671,514	+		AO353_25720	0.18	+1.4
5,671,514	+		AO353_25720	0.18	-1.8
5,671,514	+		AO353_25720	0.18	-0.2
5,671,515	-		AO353_25720	0.18	+0.9
5,671,515	-		AO353_25720	0.18	+2.4
5,671,515	-		AO353_25720	0.18	-1.5
5,671,842	+		AO353_25720	0.44	-1.2
5,672,086	+		AO353_25720	0.62	-2.6
5,672,087	-		AO353_25720	0.62	+1.5
5,672,087	-		AO353_25720	0.62	+2.0
5,672,087	-		AO353_25720	0.62	-1.8
5,672,224	+		AO353_25720	0.73	+0.4
5,672,336	-		AO353_25720	0.82	+1.4
5,672,461	+				+0.4
5,672,461	+				-2.1
5,672,462	-				-1.2
5,672,485	+				-1.5
5,672,485	+				-1.6
5,672,486	-				+0.4
5,672,718	-		AO353_25725	0.13	+2.6
5,672,719	+		AO353_25725	0.13	+2.9
5,672,726	+		AO353_25725	0.14	+0.4
5,672,819	+		AO353_25725	0.25	-1.2
5,672,837	+		AO353_25725	0.28	+1.7
5,672,840	+		AO353_25725	0.28	-0.3
5,672,841	-		AO353_25725	0.28	-1.0
5,672,964	-		AO353_25725	0.43	-1.2
5,672,964	-		AO353_25725	0.43	+0.9
5,672,964	-		AO353_25725	0.43	+0.4
5,673,097	+		AO353_25725	0.59	+2.5
5,673,097	+		AO353_25725	0.59	-2.2
5,673,098	-		AO353_25725	0.59	-0.6
5,673,098	-		AO353_25725	0.59	-1.2
5,673,167	+		AO353_25725	0.68	-0.2
5,673,168	-		AO353_25725	0.68	+1.6
5,673,168	-		AO353_25725	0.68	+3.2
5,673,302	+		AO353_25725	0.84	-1.0
5,673,302	+		AO353_25725	0.84	+0.8
5,673,303	-		AO353_25725	0.84	-1.2
5,673,303	-		AO353_25725	0.84	+2.4
5,673,303	-		AO353_25725	0.84	-1.0
5,673,333	-		AO353_25725	0.88	-1.2
5,673,431	+				-1.6
5,673,431	+				-1.0
5,673,431	+				+2.6
5,673,432	-				-0.2
5,673,432	-				-1.6
5,673,447	+				-1.0
5,673,447	+				+2.3
5,673,447	+				+0.4
5,673,447	+				-1.0
5,673,447	+				-1.8
5,673,447	+				+2.0
5,673,447	+				-1.2
5,673,447	+				+0.4
5,673,447	+				-1.8
5,673,447	+				-0.8
5,673,447	+				+0.5
5,673,447	+				+0.4
5,673,448	-				-0.2
5,673,448	-				-0.6
5,673,448	-				+1.0
5,673,448	-				+0.8
5,673,448	-				-1.6
5,673,448	-				+1.7
5,673,448	-				-1.6
5,673,451	+				-0.8
5,673,452	-				+3.4
5,673,452	-				-0.8
5,673,482	-				-1.5
5,673,510	+				-2.0
5,673,511	-				-0.6