Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_24625

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
5,418,086	+				-0.6
5,418,094	+				+0.9
5,418,094	+		AO353_24620	0.72	+2.1
5,418,094	+		AO353_24620	0.72	-0.9
5,418,094	+		AO353_24620	0.72	-0.1
5,418,094	+		AO353_24620	0.72	-1.9
5,418,094	+		AO353_24620	0.72	-1.4
5,418,094	+		AO353_24620	0.72	-2.0
5,418,095	-		AO353_24620	0.73	+0.4
5,418,095	-				-1.1
5,418,095	-		AO353_24620	0.73	-1.9
5,418,095	-		AO353_24620	0.73	-0.9
5,418,095	-		AO353_24620	0.73	-1.7
5,418,095	-		AO353_24620	0.73	-1.4
5,418,097	-		AO353_24620	0.73	+0.4
5,418,097	-		AO353_24620	0.73	-1.6
5,418,157	+		AO353_24620	0.75	-0.9
5,418,158	-		AO353_24620	0.75	+4.0
5,418,158	-		AO353_24620	0.75	-1.9
5,418,158	-		AO353_24620	0.75	+2.4
5,418,203	+				+0.9
5,418,204	-		AO353_24620	0.77	+0.4
5,418,553	+				+1.4
5,418,553	+				-0.1
5,418,557	+				-1.1
5,418,589	+				+2.2
5,418,589	+				+1.5
5,418,589	+				-0.1
5,418,589	+				-1.1
5,418,589	+				-0.6
5,418,589	+				-2.0
5,418,589	+				+1.2
5,418,589	+				-0.6
5,418,590	-				-1.1
5,418,590	-				-1.4
5,418,590	-				+1.6
5,418,615	+				+0.4
5,418,616	-				+0.4
5,418,630	-				+1.7
5,418,690	-				-0.9
5,418,744	+				-0.4
5,418,744	+				-0.9
5,418,745	-				+1.0
5,418,745	-				+1.7
5,418,788	+				+5.0
5,418,788	+				-1.4
5,418,789	-				-1.7
5,418,789	-				+1.3
5,418,789	-				-2.8
5,418,849	+				-1.1
5,418,849	+				-1.1
5,418,850	-				-1.9
5,418,850	-				-0.9
5,418,926	+				-1.7
5,418,926	+				+1.8
5,418,927	-				+0.7
5,418,927	-				+2.0
5,419,011	+				+0.2
5,419,011	+				-2.8
5,419,011	+				-0.6
5,419,011	+				+1.4
5,419,012	-				+1.1
5,419,012	-				+1.2
5,419,012	-				-2.1
5,419,012	-				+2.0
5,419,012	-				-1.6
5,419,012	-				-0.1
5,419,052	+				-0.6
5,419,052	+				-1.6
5,419,052	+				-2.1
5,419,052	+				+0.4
5,419,053	-				+0.2
5,419,056	+				+1.4
5,419,056	+				-0.1
5,419,056	+				+0.4
5,419,056	+				-0.1
5,419,057	-				+0.4
5,419,057	-				-0.9
5,419,107	-		AO353_24625	0.10	+1.8
5,419,181	+		AO353_24625	0.25	-0.3
5,419,182	-		AO353_24625	0.25	-3.1
5,419,217	+		AO353_24625	0.32	-1.4
5,419,227	+		AO353_24625	0.34	-0.1
5,419,228	-		AO353_24625	0.34	+1.4
5,419,332	+		AO353_24625	0.55	-0.6
5,419,457	-		AO353_24625	0.80	-1.1
5,419,540	+				-2.6
5,419,541	-				-0.9
5,419,584	+				-0.9
5,419,646	-				+2.0
5,419,736	+				+1.0
5,419,794	+				+1.3
5,419,797	+				-1.6
5,419,798	-				+1.6
5,419,798	-				-1.6
5,419,798	-				+2.4
5,419,798	-				+1.9
5,419,803	+				-3.0
5,419,804	-				+1.4
5,419,938	+				-1.6
5,419,938	+				+0.4
5,419,938	+				-2.1
5,419,939	-				-0.4
5,419,939	-				-0.9
5,419,939	-				+0.9
5,419,939	-				-0.9
5,419,964	-				-1.6
5,419,971	+				-0.9
5,419,972	-				-0.1
5,420,017	-				-1.4
5,420,100	-				+0.0
5,420,137	-		AO353_24630	0.16	-2.1
5,420,186	+		AO353_24630	0.28	-1.4
5,420,187	-		AO353_24630	0.28	-0.4
5,420,213	+		AO353_24630	0.34	+0.4
5,420,271	+		AO353_24630	0.47	+0.4
5,420,271	+		AO353_24630	0.47	+0.4
5,420,272	-		AO353_24630	0.47	-0.9
5,420,272	-		AO353_24630	0.47	-0.6
5,420,272	-		AO353_24630	0.47	+1.6
5,420,272	-		AO353_24630	0.47	+0.4
5,420,325	+		AO353_24630	0.60	-1.1
5,420,326	-		AO353_24630	0.60	-0.1
5,420,326	-		AO353_24630	0.60	-1.1
5,420,331	+		AO353_24630	0.61	+1.2
5,420,331	+		AO353_24630	0.61	-1.6
5,420,332	-		AO353_24630	0.61	-2.0
5,420,332	-		AO353_24630	0.61	+0.2
5,420,363	+		AO353_24630	0.68	+2.1
5,420,363	+		AO353_24630	0.68	-0.1
5,420,363	+		AO353_24630	0.68	+1.4
5,420,363	+		AO353_24630	0.68	-0.9
5,420,363	+		AO353_24630	0.68	+1.3
5,420,363	+		AO353_24630	0.68	+4.2
5,420,363	+		AO353_24630	0.68	+1.1
5,420,363	+		AO353_24630	0.68	+0.9
5,420,363	+		AO353_24630	0.68	+0.2
5,420,364	-		AO353_24630	0.69	+1.0
5,420,364	-		AO353_24630	0.69	+1.9
5,420,364	-		AO353_24630	0.69	-1.9
5,420,364	-		AO353_24630	0.69	-2.5
5,420,364	-		AO353_24630	0.69	-1.1
5,420,364	-		AO353_24630	0.69	-2.0
5,420,364	-		AO353_24630	0.69	-0.6
5,420,364	-		AO353_24630	0.69	-0.6
5,420,364	-		AO353_24630	0.69	+2.4
5,420,364	-		AO353_24630	0.69	+2.4
5,420,364	-		AO353_24630	0.69	-0.6
5,420,366	+		AO353_24630	0.69	+2.2
5,420,407	+		AO353_24630	0.78	-1.1
5,420,407	+		AO353_24630	0.78	+0.7
5,420,407	+		AO353_24630	0.78	-2.1
5,420,407	+		AO353_24630	0.78	-0.1
5,420,407	+		AO353_24630	0.78	-0.9
5,420,407	+		AO353_24630	0.78	+3.0
5,420,407	+		AO353_24630	0.78	-0.1
5,420,407	+		AO353_24630	0.78	+0.4
5,420,408	-		AO353_24630	0.79	-0.6
5,420,408	-		AO353_24630	0.79	+1.3
5,420,433	-		AO353_24630	0.84	-1.7
5,420,433	-		AO353_24630	0.84	-0.1
5,420,433	-		AO353_24630	0.84	-2.6
5,420,436	+		AO353_24630	0.85	+1.4
5,420,436	+		AO353_24630	0.85	+1.4
5,420,436	+		AO353_24630	0.85	-2.7
5,420,437	-		AO353_24630	0.85	-0.6
5,420,459	+				-2.1
5,420,459	+				+1.4
5,420,459	+				+2.3
5,420,459	+				+1.4
5,420,460	-				-1.1
5,420,460	-				-1.6
5,420,460	-				-3.0
5,420,460	-				-1.6
5,420,480	-				+3.0
5,420,522	+				+2.4
5,420,522	+				-2.1
5,420,548	+				-0.9
5,420,548	+				-1.1
5,420,548	+				-0.6
5,420,548	+				-0.9
5,420,549	-				-1.9
5,420,549	-				+3.4
5,420,549	-				+1.4
5,420,549	-				+0.5
5,420,549	-				-0.1