Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_24070

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
5,294,717	-		AO353_24065	0.33	-0.6
5,294,746	-		AO353_24065	0.35	-0.2
5,294,746	-		AO353_24065	0.35	-0.6
5,294,767	+		AO353_24065	0.37	-1.4
5,294,767	+		AO353_24065	0.37	-1.9
5,294,767	+		AO353_24065	0.37	+1.1
5,294,767	+		AO353_24065	0.37	-1.4
5,294,767	+		AO353_24065	0.37	-0.9
5,294,767	+				-0.2
5,294,768	-		AO353_24065	0.37	+1.1
5,294,768	-		AO353_24065	0.37	-1.4
5,294,768	-		AO353_24065	0.37	+1.4
5,294,808	+		AO353_24065	0.40	-1.9
5,294,808	+		AO353_24065	0.40	+0.6
5,294,808	+		AO353_24065	0.40	-0.2
5,294,968	+		AO353_24065	0.53	-1.4
5,294,968	+		AO353_24065	0.53	-2.2
5,294,968	+		AO353_24065	0.53	-1.7
5,294,968	+		AO353_24065	0.53	-0.9
5,294,968	+		AO353_24065	0.53	-2.3
5,294,969	-		AO353_24065	0.53	-0.3
5,294,969	-		AO353_24065	0.53	-0.6
5,294,969	-		AO353_24065	0.53	-0.2
5,294,987	-		AO353_24065	0.54	-1.2
5,295,027	+		AO353_24065	0.57	-1.4
5,295,027	+		AO353_24065	0.57	-0.9
5,295,055	+		AO353_24065	0.59	-1.2
5,295,055	+		AO353_24065	0.59	-2.9
5,295,055	+		AO353_24065	0.59	+2.2
5,295,056	-		AO353_24065	0.60	-1.9
5,295,056	-		AO353_24065	0.60	-0.9
5,295,120	+		AO353_24065	0.65	-1.6
5,295,134	+		AO353_24065	0.66	+0.5
5,295,134	+		AO353_24065	0.66	-3.0
5,295,134	+		AO353_24065	0.66	+1.1
5,295,134	+		AO353_24065	0.66	+1.6
5,295,135	-		AO353_24065	0.66	-2.0
5,295,135	-		AO353_24065	0.66	-2.2
5,295,136	+		AO353_24065	0.66	+0.8
5,295,136	+		AO353_24065	0.66	-0.2
5,295,136	+		AO353_24065	0.66	+2.7
5,295,136	+		AO353_24065	0.66	-0.6
5,295,136	+		AO353_24065	0.66	-0.2
5,295,136	+		AO353_24065	0.66	-0.9
5,295,137	-		AO353_24065	0.66	-2.3
5,295,137	-		AO353_24065	0.66	-2.2
5,295,137	-		AO353_24065	0.66	-1.9
5,295,137	-		AO353_24065	0.66	-0.2
5,295,140	+		AO353_24065	0.66	+2.6
5,295,140	+		AO353_24065	0.66	-1.4
5,295,140	+		AO353_24065	0.66	-0.9
5,295,148	-		AO353_24065	0.67	+1.0
5,295,148	-		AO353_24065	0.67	-1.2
5,295,148	-		AO353_24065	0.67	+2.0
5,295,179	+		AO353_24065	0.69	+3.1
5,295,201	-		AO353_24065	0.71	-0.9
5,295,231	+		AO353_24065	0.73	+1.8
5,295,231	+		AO353_24065	0.73	-2.2
5,295,231	+		AO353_24065	0.73	-1.2
5,295,232	-		AO353_24065	0.73	-0.9
5,295,235	-		AO353_24065	0.74	+0.4
5,295,258	+		AO353_24065	0.75	+2.0
5,295,258	+		AO353_24065	0.75	+3.8
5,295,258	+		AO353_24065	0.75	+1.7
5,295,258	+		AO353_24065	0.75	-0.2
5,295,258	+		AO353_24065	0.75	-2.6
5,295,259	-		AO353_24065	0.75	-1.2
5,295,259	-		AO353_24065	0.75	-1.6
5,295,259	-		AO353_24065	0.75	-1.6
5,295,259	-		AO353_24065	0.75	+1.7
5,295,308	+		AO353_24065	0.79	+0.4
5,295,308	+		AO353_24065	0.79	+2.9
5,295,308	+		AO353_24065	0.79	-0.2
5,295,309	-		AO353_24065	0.79	-0.7
5,295,309	-		AO353_24065	0.79	-0.2
5,295,369	+		AO353_24065	0.84	+3.0
5,295,370	-		AO353_24065	0.84	-1.2
5,295,370	-		AO353_24065	0.84	+1.8
5,295,370	-		AO353_24065	0.84	-1.4
5,295,370	-		AO353_24065	0.84	+1.6
5,295,370	-		AO353_24065	0.84	-0.2
5,295,393	+		AO353_24065	0.86	-1.2
5,295,448	+				-1.6
5,295,448	+				-0.6
5,295,448	+				+0.6
5,295,449	-				+1.4
5,295,449	-				+2.1
5,295,454	+				-0.8
5,295,454	+				-1.6
5,295,455	-				+1.3
5,295,455	-				+0.8
5,295,458	+				-2.5
5,295,459	-				-1.4
5,295,459	-				-0.6
5,295,459	-				+0.3
5,295,508	+				+1.2
5,295,508	+				+1.7
5,295,508	+				+0.4
5,295,508	+				-0.3
5,295,508	+				-2.6
5,295,508	+				-0.9
5,295,508	+				+3.0
5,295,508	+				-1.6
5,295,508	+				+0.0
5,295,508	+				-0.9
5,295,508	+				-1.2
5,295,508	+				+1.0
5,295,508	+				+0.4
5,295,508	+				-0.6
5,295,508	+				+3.7
5,295,508	+				-0.2
5,295,509	-				+0.4
5,295,509	-				+4.2
5,295,509	-				+1.9
5,295,509	-				+0.6
5,295,509	-				-1.4
5,295,509	-				+2.7
5,295,509	-				-1.4
5,295,509	-				+4.2
5,295,509	-				-0.6
5,295,509	-				-1.2
5,295,509	-				+1.4
5,295,509	-				-1.1
5,295,509	-				+0.9
5,295,509	-				-0.7
5,295,509	-				+1.3
5,295,509	-				+0.6
5,295,509	-				-1.6
5,295,509	-				+0.2
5,295,547	-				-0.4
5,295,555	+				+1.9
5,295,559	+				+2.2
5,295,568	+				-0.9
5,295,568	+				+2.0
5,295,568	+				-0.6
5,295,569	-				+2.0
5,295,569	-				-0.9
5,295,569	-				+0.4
5,295,569	-				-0.2
5,295,569	-				+1.4
5,295,572	+				+0.1
5,295,572	+				+1.2
5,295,573	-				-1.4
5,295,573	-				-1.5
5,295,582	+				+1.7
5,295,582	+				+1.3
5,295,583	-				+0.9
5,295,583	-				-2.8
5,295,590	-				+2.4
5,295,590	-				+1.0
5,295,590	-				-0.6
5,295,628	+				-1.0
5,295,628	+				-0.9
5,295,628	+				+0.4
5,295,629	-				-1.7
5,295,629	-				-0.9
5,295,629	-				+0.4
5,295,629	-				-0.6
5,295,629	-				+1.5
5,295,636	+				-0.9
5,295,636	+				-2.7
5,295,636	+				+0.4
5,295,636	+				-0.2
5,295,637	-				-0.2
5,295,637	-				-1.2
5,295,637	-				-1.7
5,295,637	-				-1.4
5,295,637	-				+0.4
5,295,659	+				-0.6
5,295,659	+				+1.4
5,295,660	-				+0.8
5,295,750	+				-1.2
5,295,751	-				-0.9
5,295,751	-				+0.8
5,295,983	+		AO353_24070	0.38	-1.9
5,295,983	+		AO353_24070	0.38	-0.6
5,295,983	+		AO353_24070	0.38	-0.2
5,295,984	-		AO353_24070	0.38	+1.4
5,295,984	-				+1.4
5,295,984	-		AO353_24070	0.38	-1.2
5,295,984	-		AO353_24070	0.38	-0.9
5,295,984	-		AO353_24070	0.38	+1.1
5,296,001	+		AO353_24070	0.41	-0.2
5,296,219	+		AO353_24070	0.68	+1.6
5,296,219	+		AO353_24070	0.68	+0.4
5,296,219	+		AO353_24070	0.68	+0.8
5,296,220	-		AO353_24070	0.68	+1.1
5,296,220	-		AO353_24070	0.68	-0.6
5,296,220	-		AO353_24070	0.68	+0.1
5,296,220	-		AO353_24070	0.68	-1.6
5,296,220	-		AO353_24070	0.68	+3.4
5,296,220	-		AO353_24070	0.68	-0.2
5,296,221	+		AO353_24070	0.69	+0.4
5,296,221	+		AO353_24070	0.69	+3.6
5,296,221	+		AO353_24070	0.69	-0.6
5,296,221	+		AO353_24070	0.69	+2.4
5,296,222	-		AO353_24070	0.69	+1.7
5,296,222	-		AO353_24070	0.69	+0.4
5,296,279	+		AO353_24070	0.76	-1.9
5,296,280	-		AO353_24070	0.76	-0.2
5,296,280	-		AO353_24070	0.76	-2.3
5,296,280	-		AO353_24070	0.76	+2.8
5,296,280	-		AO353_24070	0.76	+2.2
5,296,280	-		AO353_24070	0.76	-1.2
5,296,280	-		AO353_24070	0.76	+0.7
5,296,280	-		AO353_24070	0.76	-1.4
5,296,280	-		AO353_24070	0.76	-0.6
5,296,280	-		AO353_24070	0.76	+1.4
5,296,344	+		AO353_24070	0.84	+0.5
5,296,391	+				-2.0
5,296,391	+				+2.0
5,296,392	-				+1.4
5,296,392	-				+1.6
5,296,475	+				+1.8
5,296,475	+				+1.8
5,296,491	+				-1.4
5,296,492	-				+0.4
5,296,492	-				-1.2
5,296,492	-				-0.4
5,296,553	+				-1.5
5,296,553	+				-0.9
5,296,553	+				+0.4
5,296,553	+				-1.6
5,296,553	+				+1.2
5,296,553	+				+1.2
5,296,554	-				+0.3
5,296,554	-				+0.7
5,296,579	+				+0.9
5,296,579	+				-0.6
5,296,579	+				-1.2
5,296,579	+				-0.6
5,296,579	+				-0.2
5,296,579	+				+1.4
5,296,579	+				+2.2
5,296,579	+				-1.4
5,296,579	+				+1.2
5,296,579	+				+0.1
5,296,580	-				+1.8
5,296,580	-				-1.9
5,296,580	-				-0.2
5,296,580	-				+1.4
5,296,580	-				-0.5
5,296,580	-				-1.9
5,296,580	-				-0.9
5,296,580	-				+2.6
5,296,580	-				-1.4
5,296,591	+				+2.5
5,296,591	+				+0.4
5,296,592	-				-0.6
5,296,592	-				+2.7
5,296,592	-				-1.2
5,296,604	+				-1.3
5,296,783	+		AO353_24075	0.12	-0.9
5,296,783	+		AO353_24075	0.12	+1.3
5,296,784	-		AO353_24075	0.12	-1.4
5,297,221	-		AO353_24075	0.42	-1.1
5,297,392	+		AO353_24075	0.54	+2.9
5,297,392	+		AO353_24075	0.54	-0.1
5,297,392	+		AO353_24075	0.54	-0.9
5,297,392	+		AO353_24075	0.54	-1.1
5,297,416	+		AO353_24075	0.55	+0.4
5,297,417	-		AO353_24075	0.55	+2.8
5,297,436	+		AO353_24075	0.57	-1.4
5,297,457	-		AO353_24075	0.58	-2.7
5,297,457	-		AO353_24075	0.58	-1.4