Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21555

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
4,717,619	+		AO353_21550	0.41	+1.0
4,717,619	+		AO353_21550	0.41	+2.1
4,717,619	+		AO353_21550	0.41	+2.6
4,717,619	+		AO353_21550	0.41	+1.6
4,717,619	+		AO353_21550	0.41	-0.0
4,717,620	-		AO353_21550	0.41	-0.0
4,717,620	-		AO353_21550	0.41	-1.4
4,717,679	+		AO353_21550	0.45	-2.1
4,717,680	-		AO353_21550	0.45	-1.2
4,717,680	-		AO353_21550	0.45	-1.1
4,717,680	-		AO353_21550	0.45	+2.2
4,717,680	-		AO353_21550	0.45	-0.7
4,717,715	+		AO353_21550	0.47	+0.6
4,717,715	+		AO353_21550	0.47	-0.0
4,717,715	+		AO353_21550	0.47	+1.6
4,717,715	+		AO353_21550	0.47	+1.6
4,717,716	-		AO353_21550	0.47	+0.1
4,717,716	-		AO353_21550	0.47	-0.4
4,717,752	-		AO353_21550	0.50	-1.6
4,717,794	-		AO353_21550	0.52	+1.4
4,718,009	+		AO353_21550	0.67	+1.6
4,718,009	+		AO353_21550	0.67	-0.4
4,718,009	+		AO353_21550	0.67	-0.4
4,718,009	+		AO353_21550	0.67	+2.7
4,718,010	-		AO353_21550	0.67	+1.3
4,718,010	-		AO353_21550	0.67	+2.3
4,718,010	-		AO353_21550	0.67	+1.1
4,718,010	-		AO353_21550	0.67	-2.4
4,718,010	-		AO353_21550	0.67	-0.7
4,718,055	-		AO353_21550	0.70	-1.7
4,718,066	+		AO353_21550	0.71	+1.6
4,718,066	+		AO353_21550	0.71	+0.7
4,718,067	-		AO353_21550	0.71	-0.1
4,718,067	-		AO353_21550	0.71	-0.7
4,718,067	-		AO353_21550	0.71	+2.0
4,718,344	+		AO353_21550	0.89	-0.0
4,718,344	+		AO353_21550	0.89	-0.6
4,718,345	-		AO353_21550	0.89	-0.4
4,718,385	-				-1.2
4,718,385	-				-1.7
4,718,760	-		AO353_21555	0.40	-2.7
4,719,026	-		AO353_21555	0.86	+0.7
4,719,026	-		AO353_21555	0.86	-1.2
4,719,029	+		AO353_21555	0.87	-1.7
4,719,029	+		AO353_21555	0.87	+1.7
4,719,029	+		AO353_21555	0.87	+0.6
4,719,030	-		AO353_21555	0.87	+1.0
4,719,042	+		AO353_21555	0.89	+1.6
4,719,042	+		AO353_21555	0.89	-0.0
4,719,042	+		AO353_21555	0.89	-0.4
4,719,042	+		AO353_21555	0.89	-1.6
4,719,042	+		AO353_21555	0.89	+2.4
4,719,042	+		AO353_21555	0.89	-1.6
4,719,042	+		AO353_21555	0.89	-1.2
4,719,043	-		AO353_21555	0.89	+2.1
4,719,043	-		AO353_21555	0.89	+1.9
4,719,043	-		AO353_21555	0.89	+0.6
4,719,043	-		AO353_21555	0.89	-0.0
4,719,092	-				-1.3
4,719,092	-				+1.1
4,719,177	+				+0.6
4,719,178	-				+0.6
4,719,178	-				-0.0
4,719,182	+				+1.6
4,719,251	+				-0.7
4,719,251	+				-0.0
4,719,251	+				-1.0
4,719,263	+				-1.4
4,719,274	+				+1.2
4,719,274	+				-0.9
4,719,275	-				+1.4
4,719,277	-				-1.2
4,719,277	-				+3.6
4,719,277	-				-1.7
4,719,348	-				+2.3
4,719,368	-				+0.6
4,719,368	-				-2.2
4,719,675	+		AO353_21560	0.77	-2.1
4,719,675	+		AO353_21560	0.77	-0.5
4,719,675	+		AO353_21560	0.77	-0.4
4,719,675	+		AO353_21560	0.77	-1.4
4,719,675	+		AO353_21560	0.77	-1.0
4,719,676	-		AO353_21560	0.77	+2.4
4,719,676	-		AO353_21560	0.77	-0.4
4,719,676	-		AO353_21560	0.77	+2.4
4,719,676	-		AO353_21560	0.77	-2.4
4,719,676	-		AO353_21560	0.77	-0.7
4,719,676	-		AO353_21560	0.77	-2.1
4,719,676	-		AO353_21560	0.77	-1.4
4,719,676	-		AO353_21560	0.77	-0.6
4,719,677	+		AO353_21560	0.77	-3.1
4,719,678	-		AO353_21560	0.77	-1.4
4,719,842	-				-1.4
4,719,853	-				+0.6