Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21270

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
4,654,313	+		AO353_21265	0.47	+1.1
4,654,313	+		AO353_21265	0.47	+2.2
4,654,400	+		AO353_21265	0.55	-0.4
4,654,401	-		AO353_21265	0.55	+1.4
4,654,401	-		AO353_21265	0.55	+2.2
4,654,401	-		AO353_21265	0.55	+0.6
4,654,401	-		AO353_21265	0.55	-1.9
4,654,401	-		AO353_21265	0.55	+0.5
4,654,401	-		AO353_21265	0.55	-0.7
4,654,403	+		AO353_21265	0.55	+1.3
4,654,403	+		AO353_21265	0.55	-1.6
4,654,403	+		AO353_21265	0.55	-0.7
4,654,403	+		AO353_21265	0.55	-0.7
4,654,403	+		AO353_21265	0.55	+0.4
4,654,404	-		AO353_21265	0.55	-1.2
4,654,404	-		AO353_21265	0.55	-0.0
4,654,404	-		AO353_21265	0.55	-2.6
4,654,404	-		AO353_21265	0.55	-1.1
4,654,406	+		AO353_21265	0.56	-2.1
4,654,406	+		AO353_21265	0.56	+0.6
4,654,407	-		AO353_21265	0.56	-1.9
4,654,407	-		AO353_21265	0.56	-1.0
4,654,407	-		AO353_21265	0.56	-2.4
4,654,407	-		AO353_21265	0.56	+2.0
4,654,407	-		AO353_21265	0.56	-0.0
4,654,460	+		AO353_21265	0.61	+2.9
4,654,460	+		AO353_21265	0.61	+0.9
4,654,461	-		AO353_21265	0.61	+2.8
4,654,461	-		AO353_21265	0.61	+2.6
4,654,580	+		AO353_21265	0.72	-1.0
4,654,610	+		AO353_21265	0.75	-1.4
4,654,610	+		AO353_21265	0.75	-1.2
4,654,611	-		AO353_21265	0.75	+1.6
4,654,611	-		AO353_21265	0.75	+4.9
4,654,960	-				+2.5
4,655,034	+				+2.8
4,655,127	+				-0.0
4,655,128	-				+1.6
4,655,256	+				-0.0
4,655,257	-				+0.6
4,655,295	-		AO353_21270	0.14	-0.2
4,655,414	+		AO353_21270	0.30	+2.1
4,655,414	+		AO353_21270	0.30	+1.2
4,655,414	+		AO353_21270	0.30	-1.6
4,655,414	+		AO353_21270	0.30	-1.6
4,655,415	-		AO353_21270	0.30	-1.2
4,655,415	-		AO353_21270	0.30	-0.1
4,655,435	-		AO353_21270	0.33	-1.2
4,655,435	-		AO353_21270	0.33	-0.7
4,655,493	+		AO353_21270	0.41	+4.0
4,655,621	+		AO353_21270	0.57	-0.4
4,655,621	+		AO353_21270	0.57	+1.8
4,655,621	+		AO353_21270	0.57	-0.4
4,655,621	+		AO353_21270	0.57	+3.4
4,655,621	+		AO353_21270	0.57	-2.5
4,655,621	+		AO353_21270	0.57	-1.9
4,655,621	+		AO353_21270	0.57	+3.2
4,655,621	+		AO353_21270	0.57	-2.3
4,655,621	+		AO353_21270	0.57	+0.1
4,655,621	+		AO353_21270	0.57	-1.7
4,655,621	+		AO353_21270	0.57	-1.2
4,655,621	+		AO353_21270	0.57	-0.4
4,655,622	-		AO353_21270	0.58	-0.7
4,655,622	-		AO353_21270	0.58	+2.6
4,655,622	-		AO353_21270	0.58	+2.3
4,655,622	-		AO353_21270	0.58	+2.1
4,655,622	-		AO353_21270	0.58	-2.3
4,655,622	-		AO353_21270	0.58	+1.4
4,655,622	-		AO353_21270	0.58	-0.7
4,655,622	-		AO353_21270	0.58	+0.6
4,655,622	-		AO353_21270	0.58	-0.4
4,655,622	-		AO353_21270	0.58	+2.0
4,655,622	-		AO353_21270	0.58	+2.8
4,655,622	-				-0.4
4,655,622	-		AO353_21270	0.58	+0.3
4,655,622	-		AO353_21270	0.58	-2.0
4,655,685	+		AO353_21270	0.66	-1.6
4,655,686	-		AO353_21270	0.66	-1.2
4,655,686	-		AO353_21270	0.66	-1.7
4,655,686	-		AO353_21270	0.66	-1.0
4,655,766	-		AO353_21270	0.77	+1.8
4,655,768	+		AO353_21270	0.77	+0.6
4,655,769	-		AO353_21270	0.77	+1.2
4,655,769	-		AO353_21270	0.77	+0.9
4,655,769	-				-0.0
4,655,777	+		AO353_21270	0.78	-0.4
4,655,777	+		AO353_21270	0.78	+3.9
4,655,778	-		AO353_21270	0.78	-1.4
4,655,898	-				-0.0
4,655,960	+				-0.7
4,655,960	+				-0.4
4,655,960	+				-1.2
4,655,961	-				+0.8
4,655,961	-				-2.9
4,655,961	-				-1.6
4,656,020	+		AO353_21275	0.16	-1.4
4,656,020	+		AO353_21275	0.16	-1.6
4,656,020	+		AO353_21275	0.16	-1.4
4,656,020	+		AO353_21275	0.16	-1.2
4,656,020	+		AO353_21275	0.16	+0.9
4,656,020	+		AO353_21275	0.16	-0.7
4,656,021	-		AO353_21275	0.17	-1.6
4,656,021	-		AO353_21275	0.17	+1.9
4,656,021	-		AO353_21275	0.17	-1.2
4,656,021	-		AO353_21275	0.17	-1.6
4,656,021	-		AO353_21275	0.17	+0.3
4,656,048	+		AO353_21275	0.22	+2.0
4,656,048	+		AO353_21275	0.22	+0.8
4,656,048	+		AO353_21275	0.22	-1.7
4,656,048	+		AO353_21275	0.22	-0.7
4,656,048	+		AO353_21275	0.22	+0.5
4,656,048	+		AO353_21275	0.22	-0.7
4,656,049	-		AO353_21275	0.22	+0.9
4,656,049	-		AO353_21275	0.22	+1.3
4,656,049	-		AO353_21275	0.22	+0.8
4,656,049	-		AO353_21275	0.22	-1.4
4,656,049	-		AO353_21275	0.22	-0.0
4,656,049	-		AO353_21275	0.22	-0.4
4,656,049	-		AO353_21275	0.22	-0.7
4,656,049	-		AO353_21275	0.22	+1.6
4,656,255	+		AO353_21275	0.62	-0.4
4,656,255	+		AO353_21275	0.62	-0.9
4,656,255	+		AO353_21275	0.62	-2.1
4,656,255	+		AO353_21275	0.62	-0.4
4,656,256	-		AO353_21275	0.62	+0.8
4,656,256	-		AO353_21275	0.62	-1.6
4,656,256	-		AO353_21275	0.62	-1.0
4,656,256	-		AO353_21275	0.62	-1.0
4,656,256	-		AO353_21275	0.62	+1.6
4,656,402	+				-0.4
4,656,402	+				-1.0
4,656,403	-				-1.0
4,656,403	-				+0.4
4,656,403	-				-1.4
4,656,403	-				-2.7
4,656,403	-				-0.7
4,656,415	+				-1.7
4,656,416	-				-0.8
4,656,416	-				-0.4
4,656,448	+				+0.6
4,656,448	+				-0.4
4,656,448	+				+3.4
4,656,448	+				-1.2
4,656,448	+				+1.9
4,656,448	+				-2.0
4,656,448	+				-1.4
4,656,449	-				+1.6
4,656,449	-				-0.4
4,656,449	-				-0.7
4,656,470	+				-1.0
4,656,470	+				-1.4
4,656,470	+				+1.8
4,656,470	+				+0.6
4,656,470	+				-0.7
4,656,470	+				-0.0
4,656,471	-				+1.2
4,656,471	-				-0.7
4,656,494	-				-1.7
4,656,512	-				+1.2
4,656,527	+				-0.4
4,656,527	+				-0.4
4,656,527	+				-2.0
4,656,550	+				-1.7
4,656,551	-				-2.3
4,656,551	-				-1.2
4,656,551	-				-1.0
4,656,551	-				-1.6
4,656,551	-				+0.3
4,656,551	-				-2.0
4,656,573	+				-2.2
4,656,573	+				-0.7
4,656,573	+				-0.7
4,656,574	-				-0.0
4,656,628	+				-0.0
4,656,628	+				+0.5
4,656,629	-				-1.4
4,656,881	-		AO353_21280	0.29	-2.9