Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21005

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
4,590,044	+				+1.1
4,590,075	-				-1.9
4,590,146	+		AO353_21000	0.13	+1.6
4,590,146	+		AO353_21000	0.13	-1.7
4,590,146	+		AO353_21000	0.13	-0.2
4,590,146	+		AO353_21000	0.13	-1.1
4,590,146	+		AO353_21000	0.13	-0.4
4,590,146	+		AO353_21000	0.13	+0.3
4,590,146	+		AO353_21000	0.13	-0.7
4,590,147	-		AO353_21000	0.13	-0.4
4,590,158	+		AO353_21000	0.14	-1.2
4,590,158	+		AO353_21000	0.14	+0.6
4,590,158	+		AO353_21000	0.14	-1.2
4,590,158	+		AO353_21000	0.14	-2.0
4,590,158	+		AO353_21000	0.14	-0.4
4,590,158	+		AO353_21000	0.14	+0.0
4,590,159	-		AO353_21000	0.14	-0.4
4,590,159	-		AO353_21000	0.14	-0.4
4,590,177	-		AO353_21000	0.16	+0.0
4,590,247	+		AO353_21000	0.23	-0.4
4,590,255	+		AO353_21000	0.24	+0.7
4,590,255	+		AO353_21000	0.24	+2.9
4,590,255	+		AO353_21000	0.24	+0.9
4,590,255	+		AO353_21000	0.24	+0.0
4,590,278	+		AO353_21000	0.26	-1.0
4,590,278	+		AO353_21000	0.26	+0.6
4,590,278	+		AO353_21000	0.26	-1.6
4,590,278	+		AO353_21000	0.26	+2.4
4,590,279	-		AO353_21000	0.26	+1.6
4,590,279	-		AO353_21000	0.26	+0.1
4,590,279	-		AO353_21000	0.26	-1.6
4,590,279	-		AO353_21000	0.26	-0.2
4,590,279	-		AO353_21000	0.26	+0.0
4,590,279	-		AO353_21000	0.26	+1.2
4,590,279	-		AO353_21000	0.26	-1.2
4,590,295	+		AO353_21000	0.28	+0.2
4,590,295	+		AO353_21000	0.28	+0.6
4,590,295	+		AO353_21000	0.28	+0.0
4,590,296	-		AO353_21000	0.28	+2.8
4,590,296	-		AO353_21000	0.28	-2.0
4,590,296	-		AO353_21000	0.28	-1.6
4,590,296	-		AO353_21000	0.28	-0.7
4,590,296	-		AO353_21000	0.28	-1.4
4,590,308	+		AO353_21000	0.29	-0.7
4,590,413	+		AO353_21000	0.40	+2.2
4,590,432	-		AO353_21000	0.42	+2.6
4,590,432	-		AO353_21000	0.42	+0.4
4,590,463	-		AO353_21000	0.45	+1.6
4,590,463	-		AO353_21000	0.45	-2.0
4,590,463	-		AO353_21000	0.45	+1.1
4,590,599	+		AO353_21000	0.59	+0.6
4,590,600	-		AO353_21000	0.59	-1.7
4,590,600	-		AO353_21000	0.59	+1.6
4,590,600	-		AO353_21000	0.59	-2.3
4,590,600	-		AO353_21000	0.59	-1.0
4,590,685	+		AO353_21000	0.67	+2.6
4,590,685	+		AO353_21000	0.67	-1.0
4,590,685	+		AO353_21000	0.67	+1.6
4,590,686	-		AO353_21000	0.68	-0.7
4,590,686	-		AO353_21000	0.68	-1.0
4,590,686	-		AO353_21000	0.68	-1.0
4,590,686	-		AO353_21000	0.68	-0.7
4,590,830	+		AO353_21000	0.82	-0.2
4,590,830	+		AO353_21000	0.82	+2.2
4,590,831	-		AO353_21000	0.82	-0.4
4,590,831	-		AO353_21000	0.82	+1.6
4,590,831	-		AO353_21000	0.82	-2.9
4,590,923	+				+1.4
4,590,923	+				-0.3
4,590,923	+				-0.2
4,590,923	+				-2.6
4,590,923	+				-2.3
4,590,923	+				-1.7
4,590,924	-				+2.5
4,590,924	-				-1.0
4,591,001	+				-0.6
4,591,001	+				-2.2
4,591,001	+				+0.0
4,591,001	+				-0.3
4,591,001	+				-0.8
4,591,001	+				-1.4
4,591,001	+				+1.3
4,591,001	+				-1.7
4,591,002	-				+1.6
4,591,002	-				-0.7
4,591,264	+		AO353_21005	0.29	-1.4
4,591,264	+		AO353_21005	0.29	+2.6
4,591,264	+		AO353_21005	0.29	-1.6
4,591,264	+		AO353_21005	0.29	+0.6
4,591,265	-		AO353_21005	0.29	+1.6
4,591,265	-		AO353_21005	0.29	+2.0
4,591,265	-		AO353_21005	0.29	-0.7
4,591,265	-		AO353_21005	0.29	-1.6
4,591,626	+		AO353_21005	0.72	-0.4
4,591,626	+		AO353_21005	0.72	-0.4
4,591,627	-		AO353_21005	0.72	-1.4
4,591,630	+		AO353_21005	0.72	-2.7
4,591,630	+		AO353_21005	0.72	-1.6
4,591,630	+		AO353_21005	0.72	+2.8
4,591,630	+		AO353_21005	0.72	-2.0
4,591,630	+		AO353_21005	0.72	+0.6
4,591,630	+		AO353_21005	0.72	+0.2
4,591,631	-		AO353_21005	0.72	+0.9
4,591,631	-		AO353_21005	0.72	-1.4
4,591,631	-		AO353_21005	0.72	+0.1
4,591,631	-		AO353_21005	0.72	+1.9
4,591,650	-		AO353_21005	0.74	-0.4
4,591,650	-		AO353_21005	0.74	-1.2
4,591,714	+		AO353_21005	0.82	+0.2
4,591,714	+		AO353_21005	0.82	+1.2
4,591,714	+		AO353_21005	0.82	-1.7
4,591,714	+		AO353_21005	0.82	-0.7
4,591,714	+		AO353_21005	0.82	+1.1
4,591,714	+		AO353_21005	0.82	-2.1
4,591,714	+		AO353_21005	0.82	-2.3
4,591,714	+		AO353_21005	0.82	+2.0
4,591,715	-		AO353_21005	0.82	-0.4
4,591,715	-		AO353_21005	0.82	+0.0
4,591,715	-				-0.4
4,591,715	-		AO353_21005	0.82	-1.0
4,591,715	-		AO353_21005	0.82	-0.4
4,591,715	-		AO353_21005	0.82	-1.4
4,591,715	-		AO353_21005	0.82	-1.0
4,591,726	+		AO353_21005	0.83	+0.5
4,591,726	+		AO353_21005	0.83	-1.0
4,591,727	-		AO353_21005	0.84	+2.0
4,591,861	+				-2.1
4,591,861	+				+2.6
4,591,861	+				-2.0
4,591,861	+				+0.6
4,591,861	+				+0.0
4,591,862	-				-2.2
4,591,862	-				+0.6
4,591,936	+				+1.2
4,591,937	-				-0.4
4,591,937	-				-1.6
4,591,937	-				+3.3
4,591,939	+				+0.8
4,591,939	+				-1.7
4,591,939	+				+1.0
4,591,939	+				-1.2
4,591,939	+				-1.4
4,591,939	+				-0.4
4,591,940	-				-0.2
4,591,940	-				-1.7
4,591,940	-				-1.4
4,591,948	+				-1.0
4,591,948	+				-1.0
4,591,948	+				+1.2
4,591,949	-				-2.6
4,591,949	-				-2.7
4,592,104	+		AO353_21010	0.14	-0.7
4,592,104	+		AO353_21010	0.14	+0.2
4,592,104	+		AO353_21010	0.14	-1.7
4,592,105	-		AO353_21010	0.14	+0.3
4,592,105	-		AO353_21010	0.14	+0.6
4,592,105	-		AO353_21010	0.14	-0.7
4,592,298	+		AO353_21010	0.33	+3.0
4,592,399	-		AO353_21010	0.42	+0.4
4,592,432	-				+1.6
4,592,432	-		AO353_21010	0.45	+0.9
4,592,432	-		AO353_21010	0.45	+1.2
4,592,459	+		AO353_21010	0.48	+1.2
4,592,587	+		AO353_21010	0.60	+0.2
4,592,587	+		AO353_21010	0.60	+0.0
4,592,587	+		AO353_21010	0.60	-0.4
4,592,587	+		AO353_21010	0.60	+0.6
4,592,587	+		AO353_21010	0.60	-1.6
4,592,588	-		AO353_21010	0.60	+0.0
4,592,588	-		AO353_21010	0.60	+0.0
4,592,588	-		AO353_21010	0.60	+0.0
4,592,588	-		AO353_21010	0.60	-2.3
4,592,588	-		AO353_21010	0.60	-1.2
4,592,588	-		AO353_21010	0.60	+1.6