Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20270

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
4,455,860	+				+1.8
4,455,860	+				-1.0
4,455,860	+				-1.5
4,455,982	+				-0.2
4,455,983	-				-2.5
4,455,983	-				-2.3
4,456,017	-				-2.1
4,456,023	+				-1.7
4,456,023	+				+0.0
4,456,023	+				-3.0
4,456,023	+				-0.4
4,456,023	+				+2.0
4,456,024	-				-1.0
4,456,024	-				+0.6
4,456,024	-				-1.4
4,456,036	+				-1.2
4,456,079	+				-1.8
4,456,098	+				-2.0
4,456,099	-				+0.9
4,456,116	+				+2.9
4,456,117	-				+1.5
4,456,117	-				+1.2
4,456,120	+				+0.1
4,456,120	+				-0.1
4,456,120	+				-1.0
4,456,120	+				+1.9
4,456,120	+				+1.1
4,456,120	+				-0.4
4,456,120	+				+2.0
4,456,120	+				-0.7
4,456,120	+				-2.7
4,456,121	-				-0.4
4,456,121	-				-0.4
4,456,121	-				-2.6
4,456,121	-				-0.7
4,456,121	-				-1.5
4,456,121	-				+0.6
4,456,121	-				+2.7
4,456,121	-				-0.8
4,456,121	-				+0.6
4,456,121	-				+1.4
4,456,121	-				-1.5
4,456,121	-				-0.2
4,456,121	-				+2.4
4,456,121	-				+0.0
4,456,135	+				+2.2
4,456,135	+				-0.4
4,456,135	+				+1.1
4,456,135	+				+0.9
4,456,135	+				-0.7
4,456,135	+				-1.5
4,456,135	+				-1.4
4,456,135	+				-1.2
4,456,136	-				+0.0
4,456,136	-				-1.4
4,456,188	+				-1.2
4,456,189	-				+3.4
4,456,189	-				+1.8
4,456,189	-				+1.3
4,456,189	-				-1.7
4,456,189	-				-1.7
4,456,189	-				-1.5
4,456,189	-				+0.6
4,456,189	-				-0.4
4,456,431	+		AO353_20265	0.48	-1.0
4,456,431	+		AO353_20265	0.48	-1.5
4,456,431	+		AO353_20265	0.48	-0.7
4,456,431	+		AO353_20265	0.48	+2.9
4,456,613	+		AO353_20265	0.84	+0.0
4,456,614	-		AO353_20265	0.84	+1.6
4,456,614	-		AO353_20265	0.84	-1.7
4,456,614	-		AO353_20265	0.84	+2.2
4,456,787	+				+2.1
4,456,787	+				-1.7
4,456,788	-				+0.3
4,456,788	-				-0.7
4,456,788	-				-0.7
4,456,788	-				-0.4
4,456,788	-				-1.2
4,456,805	+				+0.6
4,456,805	+				-0.7
4,456,805	+				+1.0
4,456,806	-				-2.2
4,456,806	-				-1.7
4,457,082	-		AO353_20270	0.53	-1.2
4,457,193	+		AO353_20270	0.73	+0.2
4,457,193	+		AO353_20270	0.73	-2.5
4,457,193	+		AO353_20270	0.73	+1.6
4,457,193	+		AO353_20270	0.73	-2.3
4,457,193	+		AO353_20270	0.73	-0.4
4,457,193	+		AO353_20270	0.73	+0.6
4,457,193	+		AO353_20270	0.73	-1.7
4,457,194	-		AO353_20270	0.73	-2.5
4,457,194	-		AO353_20270	0.73	-1.0
4,457,194	-		AO353_20270	0.73	-0.4
4,457,301	+				+1.8
4,457,301	+				+2.4
4,457,301	+				-0.1
4,457,302	-				-1.5
4,457,320	+				-2.0
4,457,321	-				+1.8
4,457,321	-				-1.2
4,457,334	+				-0.7
4,457,368	+				+0.0
4,457,368	+				-1.5
4,457,368	+				+1.3
4,457,368	+				-2.3
4,457,368	+				+1.6
4,457,368	+				-0.4
4,457,368	+				-0.7
4,457,368	+				-0.1
4,457,368	+				+0.6
4,457,368	+				-1.2
4,457,368	+				-0.4
4,457,368	+				-1.7
4,457,368	+				+3.0
4,457,368	+				-0.4
4,457,368	+				-1.7
4,457,368	+				+1.4
4,457,368	+				+3.4
4,457,368	+				+1.6
4,457,368	+				-1.2
4,457,368	+				-1.5
4,457,368	+				-0.7
4,457,369	-				+2.6
4,457,369	-				-1.2
4,457,369	-				+0.2
4,457,369	-				-1.5
4,457,369	-				-0.7
4,457,369	-				-1.4
4,457,369	-				+1.6
4,457,369	-				-1.0
4,457,369	-				+2.1
4,457,369	-				-0.2
4,457,369	-				-1.5
4,457,369	-				-2.3
4,457,369	-				+1.5
4,457,369	-				+1.0
4,457,369	-				-2.3
4,457,369	-				-0.6
4,457,369	-				-2.9
4,457,369	-				+3.3
4,457,369	-				-0.4
4,457,369	-				+2.5
4,457,369	-				+0.0
4,457,369	-				-1.5
4,457,369	-				-1.0
4,457,370	+				+3.0
4,457,371	-				-1.4
4,457,371	-				+3.2
4,457,561	-		AO353_20275	0.38	+1.6
4,457,561	-		AO353_20275	0.38	+0.6
4,457,561	-		AO353_20275	0.38	-1.5
4,457,580	+		AO353_20275	0.41	-1.4
4,457,580	+		AO353_20275	0.41	-2.7
4,457,580	+		AO353_20275	0.41	-2.0
4,457,613	+		AO353_20275	0.47	+0.9
4,457,613	+		AO353_20275	0.47	+1.3
4,457,613	+		AO353_20275	0.47	-1.5
4,457,613	+		AO353_20275	0.47	-2.8
4,457,613	+		AO353_20275	0.47	-1.0
4,457,613	+		AO353_20275	0.47	+1.9
4,457,614	-		AO353_20275	0.47	+2.7
4,457,614	-		AO353_20275	0.47	+4.3
4,457,614	-		AO353_20275	0.47	+0.1
4,457,614	-		AO353_20275	0.47	-1.7
4,457,614	-		AO353_20275	0.47	-2.3
4,457,614	-		AO353_20275	0.47	-1.4
4,457,614	-		AO353_20275	0.47	-0.4
4,457,723	+		AO353_20275	0.67	+0.0
4,457,732	+		AO353_20275	0.69	-0.4
4,457,732	+		AO353_20275	0.69	+1.5
4,457,733	-		AO353_20275	0.69	+0.9
4,457,733	-		AO353_20275	0.69	+0.6
4,457,766	+		AO353_20275	0.75	+1.6
4,457,766	+		AO353_20275	0.75	-3.2
4,457,767	-		AO353_20275	0.76	-0.7
4,457,822	+		AO353_20275	0.86	-0.4
4,457,822	+		AO353_20275	0.86	-1.4
4,457,822	+		AO353_20275	0.86	+0.0
4,457,823	-		AO353_20275	0.86	-1.0
4,457,823	-		AO353_20275	0.86	+0.6
4,457,823	-		AO353_20275	0.86	-1.7
4,457,823	-		AO353_20275	0.86	+1.2
4,457,823	-		AO353_20275	0.86	+0.6
4,457,828	-		AO353_20275	0.87	-1.0
4,457,864	+				+0.0
4,457,864	+				-1.0
4,457,864	+				+0.9
4,457,864	+				+0.0
4,457,864	+				+0.3
4,457,865	-				-1.2
4,457,865	-				-1.5
4,457,865	-				+0.7
4,457,865	-				+0.8
4,457,897	+				-1.2
4,457,897	+				-2.2
4,457,898	-				-0.2
4,457,919	+				+1.6
4,457,919	+				+0.0
4,457,920	-				-1.8
4,457,920	-				+2.4
4,457,921	+				+1.6
4,457,921	+				+2.5
4,457,921	+				-1.1
4,457,921	+				+1.6
4,457,921	+				-0.7
4,457,921	+				-1.4
4,457,921	+				-0.7
4,457,921	+				-0.2
4,457,921	+				+0.0
4,457,921	+				-0.4
4,457,921	+				-1.5
4,457,921	+				-1.8
4,457,921	+				+0.0
4,457,921	+				-1.4
4,457,921	+				-1.7
4,457,921	+				+2.9
4,457,922	-				-1.8
4,457,922	-				-1.3
4,457,922	-				-0.7
4,457,922	-				-0.4
4,457,922	-				+2.0
4,457,922	-				-0.4
4,457,922	-				+0.6
4,457,922	-				-1.0
4,457,938	+				+0.0
4,457,938	+				-1.2
4,457,938	+				+1.6
4,457,938	+				+0.9
4,457,938	+				+3.7
4,457,939	-				-1.7
4,457,939	-				+1.0
4,457,939	-				-0.2
4,457,939	-				+1.6
4,457,939	-				+2.5
4,458,008	-		AO353_20280	0.21	+0.2
4,458,008	-		AO353_20280	0.21	-1.8
4,458,045	+		AO353_20280	0.28	+2.5
4,458,046	-		AO353_20280	0.28	-1.0
4,458,174	+		AO353_20280	0.54	-2.0
4,458,174	+		AO353_20280	0.54	+3.3
4,458,174	+		AO353_20280	0.54	-0.7
4,458,174	+		AO353_20280	0.54	-1.4
4,458,174	+		AO353_20280	0.54	-1.5
4,458,175	-		AO353_20280	0.54	+0.4
4,458,175	-		AO353_20280	0.54	+2.4
4,458,228	+		AO353_20280	0.65	-0.4
4,458,228	+		AO353_20280	0.65	-0.7
4,458,228	+		AO353_20280	0.65	+0.0
4,458,229	-		AO353_20280	0.65	+1.6
4,458,239	+		AO353_20280	0.67	+0.2
4,458,240	-		AO353_20280	0.67	+3.4
4,458,252	+		AO353_20280	0.69	-1.2
4,458,252	+		AO353_20280	0.69	+0.9
4,458,252	+		AO353_20280	0.69	-0.7
4,458,252	+		AO353_20280	0.69	-1.0
4,458,253	-		AO353_20280	0.70	+0.2
4,458,253	-		AO353_20280	0.70	-0.7
4,458,253	-		AO353_20280	0.70	+2.0
4,458,253	-		AO353_20280	0.70	-1.8
4,458,253	-		AO353_20280	0.70	-0.7
4,458,294	+		AO353_20280	0.78	+2.2
4,458,294	+		AO353_20280	0.78	-1.7
4,458,294	+		AO353_20280	0.78	-1.7
4,458,295	-		AO353_20280	0.78	+0.6
4,458,295	-		AO353_20280	0.78	-0.4
4,458,295	-		AO353_20280	0.78	-0.4
4,458,295	-		AO353_20280	0.78	+0.8
4,458,296	+		AO353_20280	0.78	-1.4
4,458,297	-		AO353_20280	0.78	+2.9
4,458,297	-		AO353_20280	0.78	-2.9
4,458,297	-		AO353_20280	0.78	-0.7
4,458,327	+		AO353_20280	0.84	-1.4
4,458,327	+		AO353_20280	0.84	-0.4
4,458,327	+		AO353_20280	0.84	+1.8
4,458,328	-		AO353_20280	0.85	+0.7
4,458,328	-		AO353_20280	0.85	-1.7