Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20205

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
4,440,852	-				+0.6
4,440,873	+				+0.6
4,440,980	-				+1.8
4,441,035	+				-0.9
4,441,036	-				-1.0
4,441,050	+				-0.8
4,441,050	+				-0.7
4,441,061	-				-1.4
4,441,061	-				-2.3
4,441,097	+				-1.2
4,441,097	+				+0.9
4,441,097	+				-0.7
4,441,098	-				-1.8
4,441,098	-				-1.0
4,441,172	+				-1.0
4,441,194	+				+0.6
4,441,194	+				+0.8
4,441,194	+				-1.0
4,441,194	+				-2.5
4,441,194	+				+0.6
4,441,194	+				-1.8
4,441,195	-				-2.1
4,441,195	-				+0.5
4,441,195	-				-1.4
4,441,195	-				+1.6
4,441,195	-				-1.2
4,441,195	-				-1.2
4,441,195	-				+0.0
4,441,213	+				-0.7
4,441,213	+				-2.0
4,441,213	+				+1.6
4,441,213	+				+2.3
4,441,213	+				+0.5
4,441,213	+				-2.0
4,441,213	+				-2.1
4,441,213	+				-1.5
4,441,213	+				-0.4
4,441,213	+				+0.4
4,441,213	+				+1.0
4,441,213	+				+0.0
4,441,213	+				-0.4
4,441,214	-				-0.4
4,441,214	-				+0.0
4,441,214	-				-1.8
4,441,214	-				+1.3
4,441,214	-				+1.6
4,441,214	-				-1.4
4,441,214	-				-1.7
4,441,214	-				-0.7
4,441,214	-				+0.5
4,441,258	+				+0.6
4,441,259	-		AO353_20205	0.15	+5.5
4,441,259	-		AO353_20205	0.15	-0.7
4,441,259	-		AO353_20205	0.15	+0.6
4,441,259	-		AO353_20205	0.15	+1.1
4,441,259	-		AO353_20205	0.15	+2.1
4,441,259	-		AO353_20205	0.15	+0.0
4,441,318	+		AO353_20205	0.21	+1.6
4,441,318	+		AO353_20205	0.21	+0.6
4,441,319	-		AO353_20205	0.21	+0.6
4,441,319	-		AO353_20205	0.21	-1.2
4,441,319	-		AO353_20205	0.21	+2.0
4,441,319	-		AO353_20205	0.21	+0.4
4,441,405	-		AO353_20205	0.31	+1.0
4,441,489	-		AO353_20205	0.41	+0.0
4,441,603	+		AO353_20205	0.54	+3.0
4,441,603	+		AO353_20205	0.54	-1.4
4,441,604	-		AO353_20205	0.54	-0.4
4,441,665	+		AO353_20205	0.61	+0.0
4,441,838	+		AO353_20205	0.80	-1.7
4,441,917	+		AO353_20205	0.89	-1.5
4,441,917	+		AO353_20205	0.89	+0.4
4,441,917	+		AO353_20205	0.89	+0.0
4,442,011	+				+1.6
4,442,011	+				-1.0
4,442,011	+				-0.4
4,442,011	+				+1.4
4,442,011	+				-1.2
4,442,012	-				+1.3
4,442,012	-				+2.2
4,442,012	-				-2.2
4,442,099	+				+0.0
4,442,100	-				-0.4
4,442,119	-				-0.7
4,442,137	+				-1.8
4,442,138	-				+0.1
4,442,138	-				+0.0
4,442,145	-				+0.6
4,442,145	-				+2.2
4,442,145	-				-1.4
4,442,147	+				-1.2
4,442,147	+				+1.9
4,442,148	-				-0.7
4,442,148	-				-1.2
4,442,158	+				+0.6
4,442,159	-				+2.0
4,442,159	-				+0.0
4,442,199	+				+1.0
4,442,199	+				-0.7
4,442,199	+				-1.5
4,442,199	+				-0.4
4,442,200	-				-1.0
4,442,200	-				-2.1
4,442,200	-				+0.5
4,442,200	-				-1.4
4,442,200	-				+0.0
4,442,200	-				-1.2
4,442,200	-				-1.0
4,442,200	-				+2.2
4,442,223	+				-1.2
4,442,223	+				+2.0
4,442,223	+				-1.0
4,442,223	+				-1.4
4,442,223	+				+0.6
4,442,223	+				-0.4
4,442,223	+				-2.1
4,442,223	+				+1.6
4,442,223	+				-2.2
4,442,224	-				+0.0
4,442,224	-				+0.0
4,442,224	-				+2.3
4,442,224	-				-1.8
4,442,224	-				+0.0
4,442,224	-				+1.7
4,442,224	-				+1.2
4,442,225	+				+0.9
4,442,233	+				-1.2
4,442,234	-				+0.3
4,442,234	-				-0.7
4,442,257	+				+0.0
4,442,257	+				+0.8
4,442,257	+				-0.4
4,442,257	+				+0.6
4,442,288	+				+1.1
4,442,289	-				-0.5
4,442,289	-				+0.5
4,442,342	+				-1.0
4,442,342	+				-1.0
4,442,343	-				+0.2
4,442,471	-		AO353_20210	0.10	-1.1
4,442,509	+		AO353_20210	0.14	-0.5
4,442,509	+		AO353_20210	0.14	-0.4
4,442,509	+		AO353_20210	0.14	-1.1
4,442,510	-		AO353_20210	0.14	-0.4
4,442,510	-		AO353_20210	0.14	-1.2
4,442,510	-		AO353_20210	0.14	+2.0
4,442,510	-		AO353_20210	0.14	+3.2
4,442,510	-		AO353_20210	0.14	-0.5
4,442,742	+		AO353_20210	0.36	-2.0
4,442,743	-		AO353_20210	0.36	-1.5
4,442,743	-		AO353_20210	0.36	-0.7
4,442,805	+		AO353_20210	0.42	+2.6
4,442,805	+		AO353_20210	0.42	-0.4
4,442,806	-		AO353_20210	0.42	-1.2
4,442,806	-		AO353_20210	0.42	+2.4
4,442,806	-		AO353_20210	0.42	-0.4
4,442,806	-		AO353_20210	0.42	-0.7
4,442,806	-				+0.0
4,442,934	+		AO353_20210	0.54	-1.8
4,442,983	+		AO353_20210	0.59	+0.0
4,442,983	+		AO353_20210	0.59	+2.6
4,442,983	+		AO353_20210	0.59	-0.7
4,442,983	+		AO353_20210	0.59	-0.4
4,442,983	+		AO353_20210	0.59	-0.4
4,442,983	+		AO353_20210	0.59	-2.4
4,442,983	+		AO353_20210	0.59	-0.8
4,442,984	-		AO353_20210	0.59	-0.7
4,442,984	-		AO353_20210	0.59	+0.6
4,442,984	-		AO353_20210	0.59	+1.0
4,442,984	-		AO353_20210	0.59	+1.5
4,442,984	-		AO353_20210	0.59	-2.4
4,442,984	-		AO353_20210	0.59	+0.0
4,442,992	+		AO353_20210	0.60	-1.4
4,442,992	+		AO353_20210	0.60	+0.6
4,442,992	+		AO353_20210	0.60	+0.0
4,442,993	-		AO353_20210	0.60	-2.2
4,443,007	+		AO353_20210	0.61	+1.6
4,443,007	+		AO353_20210	0.61	-0.2
4,443,007	+		AO353_20210	0.61	+0.6
4,443,008	-		AO353_20210	0.62	+3.4
4,443,008	-		AO353_20210	0.62	-2.5
4,443,008	-		AO353_20210	0.62	-1.0
4,443,008	-		AO353_20210	0.62	+2.4
4,443,008	-		AO353_20210	0.62	+2.2
4,443,008	-		AO353_20210	0.62	-2.0
4,443,008	-		AO353_20210	0.62	+1.0