Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19790

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
4,350,268	+		AO353_19785	0.78	-1.4
4,350,268	+		AO353_19785	0.78	-1.7
4,350,269	-		AO353_19785	0.78	+3.2
4,350,269	-		AO353_19785	0.78	+0.3
4,350,505	+		AO353_19785	0.89	-1.8
4,350,753	-				+2.0
4,350,764	-				-1.4
4,350,764	-				-0.4
4,350,764	-				-0.4
4,350,835	-				+0.9
4,350,835	-				-0.7
4,350,882	+				+0.1
4,350,883	-				+0.6
4,350,883	-				-1.8
4,350,883	-				-0.7
4,350,900	+				+1.4
4,350,900	+				-0.2
4,350,900	+				-2.9
4,350,901	-				-0.4
4,350,969	+				+0.1
4,350,969	+				-2.5
4,350,969	+				+2.2
4,350,969	+				+0.2
4,350,969	+				+0.6
4,350,970	-				+0.9
4,351,028	+				+0.1
4,351,031	+				+1.4
4,351,032	-				+0.1
4,351,032	-				-0.4
4,351,032	-				-0.0
4,351,032	-				-0.9
4,351,032	-				+1.6
4,351,032	-				-0.9
4,351,032	-				+1.2
4,351,032	-				-0.7
4,351,135	+				-0.7
4,351,135	+				+0.1
4,351,136	-				+0.1
4,351,143	+				-0.9
4,351,143	+				-1.4
4,351,143	+				+0.8
4,351,144	-				+0.6
4,351,144	-				-0.9
4,351,144	-				-0.4
4,351,144	-				-0.9
4,351,144	-				+0.9
4,351,144	-				+0.9
4,351,144	-				-0.4
4,351,144	-				-0.9
4,351,144	-				+0.6
4,351,314	-		AO353_19790	0.14	-1.2
4,351,532	+		AO353_19790	0.30	-0.9
4,351,532	+		AO353_19790	0.30	-0.4
4,351,532	+		AO353_19790	0.30	+0.1
4,351,532	+		AO353_19790	0.30	-0.7
4,351,532	+		AO353_19790	0.30	+2.1
4,351,532	+		AO353_19790	0.30	-1.9
4,351,532	+		AO353_19790	0.30	-1.7
4,351,532	+		AO353_19790	0.30	-0.9
4,351,533	-		AO353_19790	0.31	-0.7
4,351,533	-		AO353_19790	0.31	-0.4
4,351,533	-		AO353_19790	0.31	-1.2
4,351,533	-		AO353_19790	0.31	-1.8
4,351,533	-		AO353_19790	0.31	+1.9
4,351,533	-		AO353_19790	0.31	-2.2
4,351,533	-		AO353_19790	0.31	+1.6
4,351,533	-		AO353_19790	0.31	-1.7
4,351,533	-		AO353_19790	0.31	-1.4
4,351,533	-		AO353_19790	0.31	-0.7
4,351,533	-		AO353_19790	0.31	+2.0
4,351,533	-		AO353_19790	0.31	-1.5
4,351,536	+		AO353_19790	0.31	-0.4
4,351,536	+		AO353_19790	0.31	-0.9
4,351,536	+		AO353_19790	0.31	-0.7
4,351,536	+		AO353_19790	0.31	-0.9
4,351,536	+		AO353_19790	0.31	-2.1
4,351,536	+		AO353_19790	0.31	-0.9
4,351,536	+		AO353_19790	0.31	+1.1
4,351,537	-		AO353_19790	0.31	+3.2
4,351,537	-		AO353_19790	0.31	-1.4
4,351,537	-		AO353_19790	0.31	-1.4
4,351,537	-		AO353_19790	0.31	-0.9
4,351,537	-		AO353_19790	0.31	-0.7
4,351,537	-		AO353_19790	0.31	-1.7
4,351,537	-		AO353_19790	0.31	-0.5
4,351,537	-		AO353_19790	0.31	-0.9
4,351,604	+		AO353_19790	0.36	-0.4
4,351,604	+		AO353_19790	0.36	-1.2
4,351,604	+		AO353_19790	0.36	-1.4
4,351,604	+		AO353_19790	0.36	-1.5
4,351,604	+		AO353_19790	0.36	-1.9
4,351,604	+		AO353_19790	0.36	-1.8
4,351,604	+		AO353_19790	0.36	-0.7
4,351,604	+		AO353_19790	0.36	-0.9
4,351,604	+		AO353_19790	0.36	+1.0
4,351,605	-		AO353_19790	0.36	-0.9
4,351,605	-		AO353_19790	0.36	+0.5
4,351,605	-		AO353_19790	0.36	+1.1
4,351,605	-		AO353_19790	0.36	-1.2
4,351,669	+		AO353_19790	0.41	-0.7
4,351,669	+		AO353_19790	0.41	-1.7
4,351,670	-		AO353_19790	0.41	-1.5
4,351,670	-		AO353_19790	0.41	-1.4
4,351,670	-		AO353_19790	0.41	-0.7
4,351,771	+		AO353_19790	0.49	+0.1
4,351,771	+		AO353_19790	0.49	+0.2
4,351,771	+		AO353_19790	0.49	-1.4
4,351,772	-		AO353_19790	0.49	-2.2
4,351,784	+		AO353_19790	0.50	-1.4
4,351,784	+		AO353_19790	0.50	-2.5
4,351,784	+		AO353_19790	0.50	-0.2
4,351,829	+		AO353_19790	0.53	+1.4
4,351,829	+		AO353_19790	0.53	+0.6
4,351,829	+		AO353_19790	0.53	-0.4
4,351,829	+		AO353_19790	0.53	-0.4
4,351,829	+		AO353_19790	0.53	+0.6
4,351,829	+		AO353_19790	0.53	-0.4
4,351,830	-		AO353_19790	0.53	+0.1
4,351,957	-		AO353_19790	0.63	-0.4
4,351,957	-		AO353_19790	0.63	-1.5
4,352,133	+		AO353_19790	0.76	+1.1
4,352,134	-		AO353_19790	0.76	+0.1
4,352,134	-				+1.6
4,352,134	-		AO353_19790	0.76	-3.0
4,352,134	-		AO353_19790	0.76	-1.5
4,352,134	-		AO353_19790	0.76	+0.1
4,352,344	+				-0.7
4,352,365	+				-1.8
4,352,365	+				-2.1
4,352,365	+				-1.4
4,352,365	+				+7.2
4,352,365	+				-0.7
4,352,365	+				-1.7
4,352,366	-				-0.9
4,352,366	-				+1.1
4,352,366	-				-0.4
4,352,366	-				-1.8
4,352,366	-				-2.7
4,352,399	+				-0.4
4,352,399	+				-2.6
4,352,399	+				+1.6
4,352,399	+				-0.9
4,352,399	+				-0.9
4,352,399	+				+0.5
4,352,400	-				-2.0
4,352,475	+				-1.3
4,352,475	+				+1.1
4,352,475	+				-0.9
4,352,475	+				+0.1
4,352,475	+				+0.8
4,352,483	+				+0.1
4,352,483	+				+4.0
4,352,483	+				-0.7
4,352,483	+				-1.5
4,352,483	+				+1.6
4,352,483	+				+1.8
4,352,483	+				+2.2
4,352,483	+				+1.7
4,352,484	-				+1.2
4,352,484	-				-0.1
4,352,484	-				+2.1
4,352,484	-				+1.3
4,352,484	-				+0.6
4,352,484	-				-0.4
4,352,484	-				-0.7
4,352,484	-				+0.6
4,352,484	-				-0.7
4,352,484	-				+2.1
4,352,484	-				+0.6
4,352,537	+				-0.9
4,352,569	+				+0.1
4,352,581	+				-0.9
4,352,581	+				-1.8
4,352,581	+				+2.6
4,352,581	+				-1.2
4,352,584	+				-0.6
4,352,774	+		AO353_19795	0.10	+2.4
4,352,775	-		AO353_19795	0.10	-1.9
4,352,775	-		AO353_19795	0.10	-0.7
4,352,775	-		AO353_19795	0.10	-0.4
4,352,775	-		AO353_19795	0.10	-1.2
4,352,775	-		AO353_19795	0.10	+2.5
4,352,775	-		AO353_19795	0.10	+1.0
4,352,775	-		AO353_19795	0.10	+1.3
4,352,810	+		AO353_19795	0.12	-0.4
4,352,810	+		AO353_19795	0.12	-0.4
4,352,810	+		AO353_19795	0.12	+6.0
4,352,811	-		AO353_19795	0.12	-0.9
4,352,811	-		AO353_19795	0.12	-0.8
4,352,879	+		AO353_19795	0.16	+2.9
4,352,880	-		AO353_19795	0.16	-0.7
4,352,894	+		AO353_19795	0.17	-2.6
4,352,895	-		AO353_19795	0.17	+1.5
4,352,895	-		AO353_19795	0.17	-0.9
4,352,917	+		AO353_19795	0.19	+1.9
4,352,917	+		AO353_19795	0.19	-2.2
4,352,918	-		AO353_19795	0.19	+1.3
4,352,996	+		AO353_19795	0.23	+1.3
4,352,996	+		AO353_19795	0.23	-0.4
4,352,996	+				-0.7
4,352,996	+		AO353_19795	0.23	-1.4
4,352,996	+		AO353_19795	0.23	-0.9
4,352,996	+		AO353_19795	0.23	+2.2
4,352,997	-		AO353_19795	0.23	-1.5
4,353,041	+		AO353_19795	0.26	-1.2
4,353,041	+		AO353_19795	0.26	+0.6
4,353,041	+		AO353_19795	0.26	+1.1
4,353,042	-		AO353_19795	0.26	-0.7
4,353,050	+		AO353_19795	0.27	-1.7
4,353,050	+		AO353_19795	0.27	+0.1
4,353,050	+		AO353_19795	0.27	-0.7
4,353,051	-		AO353_19795	0.27	+1.4
4,353,051	-		AO353_19795	0.27	-1.4
4,353,051	-		AO353_19795	0.27	-0.2
4,353,051	-		AO353_19795	0.27	-1.9
4,353,051	-		AO353_19795	0.27	+2.5
4,353,081	+		AO353_19795	0.28	-1.2
4,353,082	-		AO353_19795	0.28	-2.1
4,353,082	-		AO353_19795	0.28	+0.2
4,353,082	-		AO353_19795	0.28	-1.8
4,353,082	-		AO353_19795	0.28	-0.7
4,353,102	-		AO353_19795	0.30	+3.1
4,353,110	+		AO353_19795	0.30	-1.5
4,353,110	+		AO353_19795	0.30	-2.3
4,353,110	+		AO353_19795	0.30	-0.7
4,353,111	-		AO353_19795	0.30	+1.4
4,353,139	+		AO353_19795	0.32	-1.2
4,353,139	+		AO353_19795	0.32	+0.6
4,353,139	+		AO353_19795	0.32	-1.4
4,353,140	-		AO353_19795	0.32	+0.6
4,353,140	-		AO353_19795	0.32	+1.6
4,353,289	+		AO353_19795	0.41	-2.2
4,353,290	-		AO353_19795	0.41	+0.1
4,353,376	+		AO353_19795	0.46	-0.4
4,353,376	+		AO353_19795	0.46	+1.6
4,353,377	-		AO353_19795	0.46	+0.2
4,353,377	-		AO353_19795	0.46	+1.0