Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19540

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
4,281,840	+		AO353_19535	0.24	+1.3
4,281,840	+		AO353_19535	0.24	-1.7
4,281,841	-		AO353_19535	0.24	-1.8
4,281,841	-		AO353_19535	0.24	-1.1
4,281,841	-		AO353_19535	0.24	+2.3
4,281,885	-		AO353_19535	0.28	+0.1
4,281,885	-		AO353_19535	0.28	+2.9
4,281,957	+		AO353_19535	0.35	-0.9
4,281,957	+		AO353_19535	0.35	+1.7
4,281,957	+		AO353_19535	0.35	-2.9
4,281,957	+		AO353_19535	0.35	-0.3
4,281,958	-		AO353_19535	0.35	-0.7
4,281,958	-		AO353_19535	0.35	+1.2
4,281,958	-		AO353_19535	0.35	-1.8
4,281,958	-		AO353_19535	0.35	+0.7
4,281,996	+		AO353_19535	0.38	-1.7
4,281,996	+		AO353_19535	0.38	-0.8
4,282,026	+		AO353_19535	0.41	+1.1
4,282,026	+		AO353_19535	0.41	+1.7
4,282,027	-		AO353_19535	0.41	-1.9
4,282,027	-		AO353_19535	0.41	-0.7
4,282,027	-		AO353_19535	0.41	+2.4
4,282,027	-		AO353_19535	0.41	-0.9
4,282,123	-		AO353_19535	0.49	+0.1
4,282,123	-		AO353_19535	0.49	+3.1
4,282,123	-		AO353_19535	0.49	-2.8
4,282,123	-		AO353_19535	0.49	+0.1
4,282,123	-		AO353_19535	0.49	+0.1
4,282,123	-		AO353_19535	0.49	+0.7
4,282,143	+		AO353_19535	0.51	-0.7
4,282,143	+		AO353_19535	0.51	+0.7
4,282,143	+		AO353_19535	0.51	+2.6
4,282,143	+		AO353_19535	0.51	-0.9
4,282,144	-		AO353_19535	0.51	-0.3
4,282,144	-		AO353_19535	0.51	-0.7
4,282,144	-		AO353_19535	0.51	+1.1
4,282,212	+		AO353_19535	0.57	+1.8
4,282,213	-		AO353_19535	0.57	-1.5
4,282,213	-		AO353_19535	0.57	+0.7
4,282,213	-		AO353_19535	0.57	+0.1
4,282,213	-		AO353_19535	0.57	-1.7
4,282,233	+		AO353_19535	0.59	+0.9
4,282,233	+		AO353_19535	0.59	+0.9
4,282,234	-		AO353_19535	0.59	-1.3
4,282,234	-		AO353_19535	0.59	-1.3
4,282,234	-		AO353_19535	0.59	+0.2
4,282,234	-		AO353_19535	0.59	-0.9
4,282,234	-		AO353_19535	0.59	+0.1
4,282,234	-		AO353_19535	0.59	+0.1
4,282,255	-		AO353_19535	0.61	+1.2
4,282,255	-		AO353_19535	0.61	+1.7
4,282,278	+		AO353_19535	0.63	-0.7
4,282,278	+		AO353_19535	0.63	-0.1
4,282,278	+		AO353_19535	0.63	-0.7
4,282,278	+		AO353_19535	0.63	+0.1
4,282,278	+		AO353_19535	0.63	+1.3
4,282,279	-		AO353_19535	0.63	-1.1
4,282,279	-		AO353_19535	0.63	-0.9
4,282,335	+		AO353_19535	0.68	-0.7
4,282,336	-		AO353_19535	0.68	+3.1
4,282,407	+		AO353_19535	0.75	-1.1
4,282,407	+		AO353_19535	0.75	+1.5
4,282,407	+		AO353_19535	0.75	+1.0
4,282,407	+		AO353_19535	0.75	-0.7
4,282,407	+		AO353_19535	0.75	+1.3
4,282,408	-		AO353_19535	0.75	+3.3
4,282,408	-		AO353_19535	0.75	-0.7
4,282,408	-		AO353_19535	0.75	+1.7
4,282,408	-		AO353_19535	0.75	+0.5
4,282,408	-		AO353_19535	0.75	+0.2
4,282,408	-		AO353_19535	0.75	+1.1
4,282,449	+		AO353_19535	0.79	-1.5
4,282,449	+		AO353_19535	0.79	+0.1
4,282,450	-		AO353_19535	0.79	+1.4
4,282,450	-		AO353_19535	0.79	+0.1
4,282,450	-		AO353_19535	0.79	+3.7
4,282,450	-		AO353_19535	0.79	+1.4
4,282,476	+		AO353_19535	0.81	+0.3
4,282,476	+		AO353_19535	0.81	+0.1
4,282,476	+		AO353_19535	0.81	-0.7
4,282,476	+		AO353_19535	0.81	+0.9
4,282,477	-		AO353_19535	0.81	+2.5
4,282,477	-		AO353_19535	0.81	+2.1
4,282,477	-		AO353_19535	0.81	-1.1
4,282,527	+		AO353_19535	0.86	+0.6
4,282,527	+		AO353_19535	0.86	+0.7
4,282,527	+		AO353_19535	0.86	+0.1
4,282,527	+		AO353_19535	0.86	+2.1
4,282,528	-		AO353_19535	0.86	-1.5
4,282,528	-		AO353_19535	0.86	+0.7
4,282,528	-		AO353_19535	0.86	-1.1
4,282,528	-		AO353_19535	0.86	-1.9
4,282,528	-		AO353_19535	0.86	+2.3
4,282,528	-		AO353_19535	0.86	+0.5
4,282,528	-		AO353_19535	0.86	+0.7
4,282,528	-		AO353_19535	0.86	-0.9
4,282,528	-		AO353_19535	0.86	-1.3
4,282,528	-		AO353_19535	0.86	+0.1
4,282,528	-		AO353_19535	0.86	+0.3
4,282,528	-		AO353_19535	0.86	+2.1
4,282,528	-		AO353_19535	0.86	-1.7
4,282,528	-		AO353_19535	0.86	-0.9
4,282,528	-		AO353_19535	0.86	-1.3
4,282,530	+		AO353_19535	0.86	-1.8
4,282,530	+		AO353_19535	0.86	+1.2
4,282,530	+		AO353_19535	0.86	-1.5
4,282,530	+		AO353_19535	0.86	-1.9
4,282,530	+		AO353_19535	0.86	-0.2
4,282,530	+		AO353_19535	0.86	-1.5
4,282,530	+		AO353_19535	0.86	-1.7
4,282,531	-		AO353_19535	0.86	-1.3
4,282,531	-		AO353_19535	0.86	+1.2
4,282,531	-		AO353_19535	0.86	-0.3
4,282,566	+		AO353_19535	0.89	-1.3
4,282,566	+		AO353_19535	0.89	-0.9
4,282,566	+		AO353_19535	0.89	+0.5
4,282,566	+		AO353_19535	0.89	+3.3
4,282,567	-		AO353_19535	0.89	-3.1
4,282,567	-		AO353_19535	0.89	-0.9
4,282,680	-				+0.1
4,282,727	+				-0.7
4,282,728	-				-1.1
4,282,728	-				-2.0
4,282,740	+				-2.3
4,282,741	-				+0.7
4,282,783	+				-1.9
4,282,818	-				+1.9
4,282,859	+		AO353_19540	0.11	-1.3
4,282,859	+		AO353_19540	0.11	+1.7
4,282,860	-		AO353_19540	0.11	+0.9
4,282,860	-		AO353_19540	0.11	+2.5
4,282,886	-		AO353_19540	0.18	-0.1
4,282,886	-		AO353_19540	0.18	+1.0
4,282,913	+		AO353_19540	0.24	+1.2
4,282,913	+		AO353_19540	0.24	-1.8
4,282,913	+		AO353_19540	0.24	-2.4
4,282,913	+		AO353_19540	0.24	+0.3
4,282,914	-		AO353_19540	0.25	-0.9
4,282,914	-		AO353_19540	0.25	-0.3
4,282,914	-		AO353_19540	0.25	-1.8
4,282,914	-		AO353_19540	0.25	+2.6
4,283,020	-		AO353_19540	0.52	-1.7
4,283,020	-		AO353_19540	0.52	+0.7
4,283,060	+		AO353_19540	0.62	-1.7
4,283,060	+		AO353_19540	0.62	-0.7
4,283,060	+		AO353_19540	0.62	-3.0
4,283,060	+		AO353_19540	0.62	+2.0
4,283,060	+		AO353_19540	0.62	-0.9
4,283,061	-		AO353_19540	0.62	+2.5
4,283,061	-		AO353_19540	0.62	-2.2
4,283,061	-		AO353_19540	0.62	+0.9
4,283,061	-		AO353_19540	0.62	+2.1
4,283,061	-		AO353_19540	0.62	+0.7
4,283,093	+		AO353_19540	0.70	+1.7
4,283,093	+		AO353_19540	0.70	-1.1
4,283,093	+		AO353_19540	0.70	+1.2
4,283,093	+		AO353_19540	0.70	+1.7
4,283,094	-		AO353_19540	0.70	-1.5
4,283,121	+		AO353_19540	0.77	-0.9
4,283,121	+		AO353_19540	0.77	+0.7
4,283,121	+		AO353_19540	0.77	+0.1
4,283,121	+		AO353_19540	0.77	+1.3
4,283,121	+		AO353_19540	0.77	+2.7
4,283,121	+		AO353_19540	0.77	+2.7
4,283,121	+		AO353_19540	0.77	-0.3
4,283,121	+		AO353_19540	0.77	+1.6
4,283,122	-		AO353_19540	0.77	+2.3
4,283,122	-		AO353_19540	0.77	+0.4
4,283,122	-				-0.3
4,283,293	+				-0.8
4,283,293	+				-1.8
4,283,294	-				+1.7
4,283,294	-				-0.3
4,283,294	-				-0.9
4,283,294	-				-0.9
4,283,294	-				+1.7
4,283,294	-				+0.3
4,283,294	-				+2.8
4,283,321	-				+1.9
4,283,409	+		AO353_19545	0.30	-1.3
4,283,409	+		AO353_19545	0.30	-0.9
4,283,409	+		AO353_19545	0.30	+0.3
4,283,409	+		AO353_19545	0.30	-0.6
4,283,409	+		AO353_19545	0.30	+2.1
4,283,409	+		AO353_19545	0.30	-1.8
4,283,409	+		AO353_19545	0.30	+0.1
4,283,409	+		AO353_19545	0.30	-0.6
4,283,409	+		AO353_19545	0.30	+0.7
4,283,409	+		AO353_19545	0.30	+1.0
4,283,410	-		AO353_19545	0.30	-1.9
4,283,410	-		AO353_19545	0.30	-0.3
4,283,410	-		AO353_19545	0.30	-0.6
4,283,410	-		AO353_19545	0.30	+1.2
4,283,410	-		AO353_19545	0.30	+0.7
4,283,410	-		AO353_19545	0.30	+1.7
4,283,410	-		AO353_19545	0.30	+1.4
4,283,410	-		AO353_19545	0.30	+2.4
4,283,410	-		AO353_19545	0.30	+0.7
4,283,410	-		AO353_19545	0.30	+0.9
4,283,410	-		AO353_19545	0.30	+1.2
4,283,507	+		AO353_19545	0.55	-1.3
4,283,508	-		AO353_19545	0.55	-0.9
4,283,508	-		AO353_19545	0.55	-0.3
4,283,591	+		AO353_19545	0.77	+0.1
4,283,638	+		AO353_19545	0.89	-0.3
4,283,638	+		AO353_19545	0.89	+0.1
4,283,638	+		AO353_19545	0.89	-2.2
4,283,639	-		AO353_19545	0.89	+1.2
4,283,639	-		AO353_19545	0.89	+1.7
4,283,639	-		AO353_19545	0.89	-0.3
4,283,720	+				+0.7
4,283,720	+				+0.1
4,283,720	+				+1.4
4,283,721	-				-0.3
4,283,743	-				-0.9
4,283,743	-				-1.1
4,283,879	+				-0.6
4,283,880	-				-1.1
4,283,880	-				+3.3
4,283,880	-				-1.6
4,283,880	-				+1.4
4,283,880	-				-1.1
4,283,897	+				+2.0
4,283,897	+				-2.0
4,283,897	+				+0.2
4,283,897	+				-0.3
4,283,898	-				-1.3
4,283,898	-				+0.7
4,283,973	+				+3.5
4,283,973	+				+1.1
4,283,973	+				-0.2
4,283,974	-				+2.1
4,283,974	-				-0.9
4,283,974	-				-0.6
4,284,030	+		AO353_19550	0.13	-1.5
4,284,030	+		AO353_19550	0.13	+1.9
4,284,030	+		AO353_19550	0.13	-1.4
4,284,030	+		AO353_19550	0.13	+1.3
4,284,030	+		AO353_19550	0.13	+2.0
4,284,030	+		AO353_19550	0.13	+0.1
4,284,030	+		AO353_19550	0.13	-0.3
4,284,030	+		AO353_19550	0.13	+2.4
4,284,031	-		AO353_19550	0.13	+2.3
4,284,031	-		AO353_19550	0.13	+1.7
4,284,031	-		AO353_19550	0.13	-1.9
4,284,031	-		AO353_19550	0.13	-1.5
4,284,033	+		AO353_19550	0.13	-1.3
4,284,033	+		AO353_19550	0.13	+0.1
4,284,033	+		AO353_19550	0.13	+0.2
4,284,033	+		AO353_19550	0.13	-0.2
4,284,033	+		AO353_19550	0.13	-1.1
4,284,033	+		AO353_19550	0.13	+1.9
4,284,034	-		AO353_19550	0.13	-1.6
4,284,034	-		AO353_19550	0.13	-0.6
4,284,034	-		AO353_19550	0.13	-2.7
4,284,034	-		AO353_19550	0.13	-0.3
4,284,034	-		AO353_19550	0.13	+0.9
4,284,091	-		AO353_19550	0.17	-2.1
4,284,091	-		AO353_19550	0.17	-0.9
4,284,100	-		AO353_19550	0.18	+0.1
4,284,100	-		AO353_19550	0.18	+0.3
4,284,126	+		AO353_19550	0.20	+0.7
4,284,126	+		AO353_19550	0.20	+3.3
4,284,126	+		AO353_19550	0.20	-0.6
4,284,126	+		AO353_19550	0.20	-0.9
4,284,126	+		AO353_19550	0.20	-1.2
4,284,126	+		AO353_19550	0.20	+0.9
4,284,127	-		AO353_19550	0.20	-1.1