Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18480

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
4,068,586	+		AO353_18475	0.14	-2.7
4,068,587	-		AO353_18475	0.14	-0.6
4,068,587	-		AO353_18475	0.14	+1.8
4,068,775	-		AO353_18475	0.32	-2.8
4,068,775	-		AO353_18475	0.32	+0.8
4,068,939	+		AO353_18475	0.48	-1.9
4,068,940	-		AO353_18475	0.48	-0.2
4,068,981	+		AO353_18475	0.52	+3.1
4,068,981	+		AO353_18475	0.52	-0.6
4,068,982	-		AO353_18475	0.52	-2.0
4,068,982	-		AO353_18475	0.52	-1.8
4,069,139	-		AO353_18475	0.68	+0.9
4,069,229	+		AO353_18475	0.76	+1.8
4,069,281	+		AO353_18475	0.81	-2.2
4,069,281	+		AO353_18475	0.81	+0.8
4,069,281	+		AO353_18475	0.81	+0.8
4,069,282	-		AO353_18475	0.81	+0.9
4,069,282	-		AO353_18475	0.81	-1.2
4,069,282	-		AO353_18475	0.81	-0.8
4,069,320	+		AO353_18475	0.85	+2.5
4,069,321	-		AO353_18475	0.85	+0.8
4,069,321	-		AO353_18475	0.85	+0.3
4,069,321	-		AO353_18475	0.85	-0.8
4,069,453	-				-0.1
4,069,739	+		AO353_18480	0.21	+0.8
4,069,739	+		AO353_18480	0.21	-0.8
4,069,739	+		AO353_18480	0.21	+0.1
4,069,801	-		AO353_18480	0.26	-0.8
4,069,874	+		AO353_18480	0.31	-0.8
4,069,874	+		AO353_18480	0.31	-1.2
4,069,913	+		AO353_18480	0.33	+1.6
4,069,914	-		AO353_18480	0.33	+0.2
4,070,013	-		AO353_18480	0.40	-1.7
4,070,026	+		AO353_18480	0.41	-2.0
4,070,104	+		AO353_18480	0.46	-1.4
4,070,117	+		AO353_18480	0.47	-0.8
4,070,117	+		AO353_18480	0.47	-0.6
4,070,117	+		AO353_18480	0.47	-1.6
4,070,117	+		AO353_18480	0.47	-1.5
4,070,117	+		AO353_18480	0.47	-1.6
4,070,117	+		AO353_18480	0.47	-1.4
4,070,118	-		AO353_18480	0.47	+1.2
4,070,118	-		AO353_18480	0.47	-0.2
4,070,124	+		AO353_18480	0.48	+1.0
4,070,124	+		AO353_18480	0.48	-0.2
4,070,124	+		AO353_18480	0.48	-1.6
4,070,124	+		AO353_18480	0.48	-0.6
4,070,124	+		AO353_18480	0.48	-0.8
4,070,124	+		AO353_18480	0.48	-1.4
4,070,125	-		AO353_18480	0.48	+0.8
4,070,125	-		AO353_18480	0.48	+1.8
4,070,125	-		AO353_18480	0.48	+2.1
4,070,125	-		AO353_18480	0.48	-0.2
4,070,125	-		AO353_18480	0.48	-0.6
4,070,125	-		AO353_18480	0.48	+0.8
4,070,231	-		AO353_18480	0.55	-1.2
4,070,419	+		AO353_18480	0.68	+0.2
4,070,419	+		AO353_18480	0.68	-2.3
4,070,420	-		AO353_18480	0.68	+1.8
4,070,535	+		AO353_18480	0.76	-1.6
4,070,535	+		AO353_18480	0.76	-0.2
4,070,535	+		AO353_18480	0.76	-0.6
4,070,535	+		AO353_18480	0.76	+3.4
4,070,535	+		AO353_18480	0.76	+2.2
4,070,535	+		AO353_18480	0.76	-0.8
4,070,535	+		AO353_18480	0.76	+0.2
4,070,536	-		AO353_18480	0.76	+0.8
4,070,536	-		AO353_18480	0.76	+1.9
4,070,536	-		AO353_18480	0.76	+0.9
4,070,536	-		AO353_18480	0.76	+0.2
4,070,536	-		AO353_18480	0.76	+0.2
4,070,585	+		AO353_18480	0.79	-0.8
4,070,585	+		AO353_18480	0.79	-1.8
4,070,585	+		AO353_18480	0.79	-1.9
4,070,585	+		AO353_18480	0.79	-2.3
4,070,586	-		AO353_18480	0.80	+1.4
4,070,586	-		AO353_18480	0.80	-1.2
4,070,586	-		AO353_18480	0.80	-1.6
4,070,626	+		AO353_18480	0.82	+1.0
4,070,626	+		AO353_18480	0.82	+1.3
4,070,663	+		AO353_18480	0.85	-0.6
4,070,663	+		AO353_18480	0.85	-1.7
4,070,663	+		AO353_18480	0.85	-2.2
4,070,663	+		AO353_18480	0.85	+0.4
4,070,663	+		AO353_18480	0.85	-2.2
4,070,663	+		AO353_18480	0.85	-0.2
4,070,663	+		AO353_18480	0.85	+1.8
4,070,664	-		AO353_18480	0.85	-0.8
4,070,664	-		AO353_18480	0.85	+2.2
4,070,664	-		AO353_18480	0.85	-1.6
4,070,664	-		AO353_18480	0.85	-1.7
4,070,664	-		AO353_18480	0.85	-1.1
4,070,664	-		AO353_18480	0.85	+0.2
4,070,664	-		AO353_18480	0.85	-0.8
4,070,664	-		AO353_18480	0.85	-0.8
4,070,664	-		AO353_18480	0.85	+0.8
4,070,664	-		AO353_18480	0.85	+1.8
4,070,664	-		AO353_18480	0.85	-1.9
4,070,664	-		AO353_18480	0.85	-0.2
4,070,664	-		AO353_18480	0.85	-0.2
4,070,664	-		AO353_18480	0.85	-0.4
4,070,664	-		AO353_18480	0.85	-1.0
4,070,664	-		AO353_18480	0.85	-1.2
4,070,664	-		AO353_18480	0.85	+0.0
4,070,664	-		AO353_18480	0.85	-0.6
4,070,664	-		AO353_18480	0.85	-0.2
4,070,686	+		AO353_18480	0.86	-0.2
4,070,686	+		AO353_18480	0.86	-1.0
4,070,686	+		AO353_18480	0.86	+1.8
4,070,686	+		AO353_18480	0.86	+0.6
4,070,686	+		AO353_18480	0.86	-0.2
4,070,686	+		AO353_18480	0.86	+0.2
4,070,686	+		AO353_18480	0.86	-0.2
4,070,686	+		AO353_18480	0.86	+0.2
4,070,686	+		AO353_18480	0.86	+0.2
4,070,686	+		AO353_18480	0.86	+0.5
4,070,686	+		AO353_18480	0.86	-1.9
4,070,686	+		AO353_18480	0.86	-2.2
4,070,686	+		AO353_18480	0.86	-0.2
4,070,686	+		AO353_18480	0.86	+1.2
4,070,686	+		AO353_18480	0.86	-1.6
4,070,686	+		AO353_18480	0.86	-1.0
4,070,686	+		AO353_18480	0.86	-1.0
4,070,686	+		AO353_18480	0.86	-1.2
4,070,686	+		AO353_18480	0.86	+0.6
4,070,686	+		AO353_18480	0.86	-0.1
4,070,686	+		AO353_18480	0.86	+0.2
4,070,687	-		AO353_18480	0.86	+0.3
4,070,687	-		AO353_18480	0.86	-1.2
4,070,687	-		AO353_18480	0.86	-0.6
4,070,687	-		AO353_18480	0.86	+0.2
4,070,687	-		AO353_18480	0.86	+1.7
4,070,687	-		AO353_18480	0.86	-1.9
4,070,687	-		AO353_18480	0.86	-1.6
4,070,687	-		AO353_18480	0.86	+0.1
4,070,687	-		AO353_18480	0.86	-1.0
4,070,687	-		AO353_18480	0.86	+0.1
4,070,687	-		AO353_18480	0.86	+0.1
4,070,687	-		AO353_18480	0.86	+1.6
4,070,687	-		AO353_18480	0.86	-0.6
4,070,687	-				+0.8
4,070,687	-		AO353_18480	0.86	+1.4
4,070,687	-		AO353_18480	0.86	-2.4
4,070,687	-		AO353_18480	0.86	-2.7
4,070,687	-		AO353_18480	0.86	-2.3
4,070,687	-		AO353_18480	0.86	-0.6
4,070,687	-		AO353_18480	0.86	+1.3
4,070,687	-		AO353_18480	0.86	-0.2
4,070,687	-		AO353_18480	0.86	-1.4
4,070,687	-		AO353_18480	0.86	-0.6
4,070,687	-		AO353_18480	0.86	-1.0
4,070,687	-		AO353_18480	0.86	+1.4
4,070,687	-		AO353_18480	0.86	+1.8
4,070,687	-		AO353_18480	0.86	+0.2
4,070,687	-		AO353_18480	0.86	+0.2
4,070,688	+		AO353_18480	0.87	+0.8
4,070,688	+		AO353_18480	0.87	-2.1
4,070,688	+		AO353_18480	0.87	-0.2
4,070,688	+		AO353_18480	0.87	+4.3
4,070,688	+		AO353_18480	0.87	+1.1
4,070,688	+		AO353_18480	0.87	+1.9
4,070,688	+		AO353_18480	0.87	-2.1
4,070,688	+		AO353_18480	0.87	+0.8
4,070,688	+		AO353_18480	0.87	+0.5
4,070,688	+		AO353_18480	0.87	-1.4
4,070,688	+		AO353_18480	0.87	-1.7
4,070,689	-		AO353_18480	0.87	-0.8
4,070,689	-		AO353_18480	0.87	-1.2
4,070,689	-		AO353_18480	0.87	-1.0
4,070,736	+		AO353_18480	0.90	-0.6
4,070,737	-		AO353_18480	0.90	-0.3
4,070,737	-		AO353_18480	0.90	-0.2
4,070,920	+				-1.4
4,070,920	+				-1.4
4,070,921	-				-1.4
4,070,921	-				-1.4
4,070,940	+				-1.0
4,070,940	+				+1.8
4,070,941	-				-2.1
4,070,941	-				+1.1
4,070,941	-				-1.7
4,070,941	-				-1.0
4,070,941	-				-0.8
4,070,941	-				+0.4
4,070,941	-				-1.0
4,070,941	-				+1.3
4,070,941	-				-0.2
4,070,969	+				-1.0
4,070,969	+				-1.0
4,071,147	+		AO353_18485	0.25	+0.2
4,071,185	+		AO353_18485	0.32	-1.2
4,071,186	-		AO353_18485	0.32	+1.8
4,071,186	-		AO353_18485	0.32	-2.3
4,071,360	+		AO353_18485	0.63	-0.7
4,071,361	-		AO353_18485	0.63	-0.8
4,071,361	-		AO353_18485	0.63	+0.8
4,071,376	+		AO353_18485	0.66	+0.8
4,071,377	-		AO353_18485	0.66	-0.2
4,071,377	-		AO353_18485	0.66	-1.0
4,071,377	-		AO353_18485	0.66	-0.6
4,071,377	-		AO353_18485	0.66	+2.3
4,071,485	-		AO353_18485	0.85	+0.8
4,071,485	-		AO353_18485	0.85	-0.2
4,071,630	-				-1.7
4,071,630	-				+0.2
4,071,806	+		AO353_18490	0.15	+0.8
4,071,806	+		AO353_18490	0.15	-2.1
4,071,806	+		AO353_18490	0.15	-1.0