Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18415

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
4,055,151	+		AO353_18405	0.75	+0.8
4,055,152	-		AO353_18405	0.75	-1.2
4,055,188	+		AO353_18405	0.79	+0.3
4,055,188	+		AO353_18405	0.79	-0.8
4,055,188	+		AO353_18405	0.79	-2.0
4,055,188	+		AO353_18405	0.79	+0.8
4,055,189	-		AO353_18405	0.79	-1.4
4,055,189	-		AO353_18405	0.79	+0.6
4,055,189	-		AO353_18405	0.79	-0.6
4,055,212	+		AO353_18405	0.82	-1.2
4,055,212	+		AO353_18405	0.82	+0.2
4,055,212	+		AO353_18405	0.82	-0.8
4,055,212	+		AO353_18405	0.82	+0.6
4,055,213	-		AO353_18405	0.82	+0.7
4,055,385	+				-1.0
4,055,385	+				+1.6
4,055,385	+				+4.1
4,055,385	+				+0.2
4,055,385	+				-2.3
4,055,662	+		AO353_18410	0.46	-0.2
4,055,662	+		AO353_18410	0.46	+0.2
4,055,662	+		AO353_18410	0.46	-0.6
4,055,663	-		AO353_18410	0.46	+0.8
4,055,663	-		AO353_18410	0.46	-0.6
4,055,663	-		AO353_18410	0.46	+1.4
4,055,664	+		AO353_18410	0.46	-0.6
4,055,664	+		AO353_18410	0.46	+1.1
4,055,664	+		AO353_18410	0.46	+2.0
4,055,665	-		AO353_18410	0.47	+2.3
4,055,665	-		AO353_18410	0.47	-1.9
4,055,897	+		AO353_18410	0.85	-1.6
4,055,956	+				+0.8
4,055,956	+				-0.2
4,055,956	+				+0.8
4,055,956	+				-1.8
4,055,956	+				-0.2
4,055,964	+				+2.6
4,055,965	-				-1.4
4,055,965	-				-1.0
4,055,965	-				-1.2
4,055,983	+				-1.6
4,055,983	+				+2.1
4,055,984	-				+0.4
4,055,984	-				+0.2
4,056,007	+				+3.1
4,056,007	+				+2.9
4,056,007	+				-2.1
4,056,007	+				-1.4
4,056,008	-				-2.5
4,056,026	+				-0.8
4,056,036	+				-0.2
4,056,036	+				+1.3
4,056,036	+				+0.8
4,056,036	+				-2.0
4,056,036	+				-1.4
4,056,037	-				+1.4
4,056,037	-				-2.6
4,056,037	-				+1.4
4,056,037	-				-1.6
4,056,039	+				-0.1
4,056,039	+				-1.8
4,056,039	+				-0.6
4,056,039	+				-0.5
4,056,039	+				-1.7
4,056,039	+				-1.0
4,056,039	+				-1.8
4,056,039	+				-2.3
4,056,039	+				+1.1
4,056,039	+				-1.9
4,056,039	+				-1.8
4,056,039	+				-0.4
4,056,039	+				+0.8
4,056,039	+				+0.8
4,056,040	-				-0.8
4,056,040	-				-1.2
4,056,040	-				+0.2
4,056,040	-				-0.2
4,056,040	-				-1.9
4,056,040	-				-1.2
4,056,040	-				+0.2
4,056,040	-				+2.4
4,056,040	-				-0.8
4,056,125	+				-1.9
4,056,125	+				-0.8
4,056,126	-				-2.0
4,056,126	-				+1.8
4,056,126	-				+1.4
4,056,225	+				+0.8
4,056,225	+				+2.6
4,056,225	+				-1.0
4,056,225	+				+2.6
4,056,225	+				+0.5
4,056,225	+				-0.6
4,056,226	-				-0.8
4,056,226	-				-1.9
4,056,226	-				+1.8
4,056,226	-				-1.2
4,056,473	-		AO353_18415	0.22	+2.4
4,056,473	-		AO353_18415	0.22	+0.6
4,056,487	+		AO353_18415	0.23	+2.0
4,056,488	-		AO353_18415	0.23	-0.8
4,056,488	-		AO353_18415	0.23	+3.0
4,056,488	-		AO353_18415	0.23	-1.0
4,056,488	-		AO353_18415	0.23	+0.2
4,056,519	+		AO353_18415	0.25	+0.6
4,056,520	-		AO353_18415	0.25	-0.4
4,056,578	+		AO353_18415	0.28	-0.4
4,056,579	-		AO353_18415	0.28	+0.2
4,056,579	-		AO353_18415	0.28	-0.5
4,056,579	-		AO353_18415	0.28	-0.0
4,056,579	-		AO353_18415	0.28	-1.2
4,056,579	-		AO353_18415	0.28	+0.2
4,056,696	+		AO353_18415	0.34	-0.5
4,056,696	+		AO353_18415	0.34	-0.8
4,056,696	+		AO353_18415	0.34	+0.8
4,056,697	-		AO353_18415	0.34	-1.9
4,056,697	-		AO353_18415	0.34	+2.0
4,056,697	-		AO353_18415	0.34	+0.6
4,056,697	-		AO353_18415	0.34	-1.8
4,056,697	-		AO353_18415	0.34	+1.5
4,056,697	-		AO353_18415	0.34	-2.5
4,056,757	+		AO353_18415	0.37	+0.2
4,056,757	+		AO353_18415	0.37	-0.8
4,056,758	-		AO353_18415	0.37	-1.5
4,056,758	-		AO353_18415	0.37	+2.8
4,056,879	+		AO353_18415	0.43	+1.8
4,056,879	+		AO353_18415	0.43	+0.5
4,057,030	+		AO353_18415	0.51	-1.0
4,057,030	+		AO353_18415	0.51	-0.6
4,057,030	+		AO353_18415	0.51	-2.1
4,057,030	+		AO353_18415	0.51	+1.8
4,057,031	-		AO353_18415	0.51	-2.2
4,057,031	-		AO353_18415	0.51	+2.6
4,057,031	-		AO353_18415	0.51	+0.8
4,057,031	-		AO353_18415	0.51	+0.2
4,057,031	-		AO353_18415	0.51	-0.5
4,057,048	+		AO353_18415	0.52	+4.0
4,057,049	-		AO353_18415	0.52	-0.2
4,057,049	-		AO353_18415	0.52	-1.5
4,057,049	-		AO353_18415	0.52	+0.5
4,057,049	-		AO353_18415	0.52	-0.5
4,057,082	+		AO353_18415	0.54	-1.7
4,057,082	+		AO353_18415	0.54	-1.5
4,057,083	-		AO353_18415	0.54	+2.0
4,057,083	-		AO353_18415	0.54	-1.2
4,057,083	-		AO353_18415	0.54	-0.9
4,057,514	+		AO353_18415	0.76	+2.5
4,057,514	+		AO353_18415	0.76	-0.8
4,057,538	-		AO353_18415	0.77	+2.5
4,057,538	-		AO353_18415	0.77	+0.5
4,057,538	-		AO353_18415	0.77	-1.9
4,057,616	+		AO353_18415	0.81	+0.2
4,057,744	+		AO353_18415	0.88	+1.4
4,057,755	+		AO353_18415	0.88	+0.8
4,057,755	+		AO353_18415	0.88	-1.5
4,057,756	-		AO353_18415	0.89	-0.2
4,057,756	-		AO353_18415	0.89	-0.7
4,057,756	-		AO353_18415	0.89	-0.2
4,057,877	+				-1.1
4,057,877	+				-0.2
4,057,877	+				-0.5
4,057,877	+				-0.5
4,057,878	-				+1.6
4,057,878	-				-1.2
4,057,878	-				-0.9
4,057,878	-				+0.8
4,058,017	+				+0.8
4,058,017	+				-0.2
4,058,017	+				-0.2
4,058,017	+				-1.2
4,058,017	+				+0.2
4,058,018	-				-1.4
4,058,018	-				-1.4
4,058,018	-				-1.5
4,058,018	-				-0.5
4,058,018	-				+2.0
4,058,018	-				+0.8
4,058,018	-				+0.2
4,058,018	-				-0.8
4,058,018	-				+1.8
4,058,052	+				-0.5
4,058,052	+				-0.2
4,058,110	+				+1.4
4,058,110	+				-1.4
4,058,110	+				-0.5
4,058,111	-				+0.5
4,058,111	-				-1.9
4,058,111	-				+1.4
4,058,125	-				-1.4
4,058,159	+				+0.2
4,058,159	+				-1.2
4,058,159	+				+0.2
4,058,159	+				-1.4
4,058,160	-				-1.4
4,058,160	-				-0.0
4,058,161	+				-0.8
4,058,161	+				+0.7
4,058,161	+				-1.2
4,058,161	+				+1.8
4,058,161	+				-1.0
4,058,161	+				-1.0
4,058,161	+				+1.8
4,058,161	+				-0.8
4,058,161	+				-1.5
4,058,161	+				-2.0
4,058,161	+				+0.2
4,058,161	+				+0.2
4,058,161	+				-1.5
4,058,161	+				-1.7
4,058,161	+				+0.2
4,058,161	+				-0.0
4,058,161	+				+1.3
4,058,161	+				+0.5
4,058,161	+				-0.7
4,058,161	+				+1.4
4,058,161	+				-2.6
4,058,161	+				+4.0
4,058,161	+				+0.2
4,058,162	+				+0.2
4,058,162	-				+0.8
4,058,162	-				+0.5
4,058,162	-				-1.5
4,058,162	-				-1.2
4,058,162	-				+2.8
4,058,162	-				-1.8
4,058,162	-				-0.5
4,058,162	-				-1.0
4,058,266	+		AO353_18420	0.35	+0.2
4,058,266	+		AO353_18420	0.35	-1.0
4,058,267	-		AO353_18420	0.35	-2.9
4,058,267	-		AO353_18420	0.35	+2.6
4,058,305	+		AO353_18420	0.45	+1.8
4,058,305	+		AO353_18420	0.45	+0.3
4,058,305	+		AO353_18420	0.45	+2.8
4,058,306	-		AO353_18420	0.45	+1.2
4,058,353	+		AO353_18420	0.57	+1.5
4,058,353	+		AO353_18420	0.57	+0.9
4,058,353	+		AO353_18420	0.57	-0.2
4,058,354	-		AO353_18420	0.57	+2.4
4,058,419	-		AO353_18420	0.74	+0.4
4,058,482	+		AO353_18420	0.90	-3.1
4,058,483	-				-2.3
4,058,508	+				-1.9
4,058,534	+				-1.3
4,058,534	+				-1.5
4,058,534	+				-0.5
4,058,535	-				-1.8
4,058,535	-				-1.2
4,058,535	-				+1.9
4,058,535	-				+2.1
4,058,591	+				-1.0
4,058,592	-		AO353_18425	0.10	-1.0
4,058,592	-		AO353_18425	0.10	+1.8
4,058,592	-		AO353_18425	0.10	-2.5
4,058,887	-		AO353_18425	0.60	-1.8