Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18270

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
4,028,529	+		AO353_18265	0.60	+2.2
4,028,529	+		AO353_18265	0.60	+1.0
4,028,529	+		AO353_18265	0.60	+0.8
4,028,529	+		AO353_18265	0.60	+2.1
4,028,530	-		AO353_18265	0.60	+0.3
4,028,530	-		AO353_18265	0.60	-1.5
4,028,530	-		AO353_18265	0.60	-1.0
4,028,530	-		AO353_18265	0.60	-1.0
4,028,530	-		AO353_18265	0.60	+0.2
4,028,583	+		AO353_18265	0.63	+0.8
4,028,583	+		AO353_18265	0.63	+0.2
4,028,664	+		AO353_18265	0.67	-2.0
4,028,664	+		AO353_18265	0.67	-0.2
4,028,665	-		AO353_18265	0.67	-0.2
4,028,665	-		AO353_18265	0.67	-1.0
4,028,665	-		AO353_18265	0.67	+1.3
4,028,665	-		AO353_18265	0.67	+1.8
4,028,682	+		AO353_18265	0.68	-1.0
4,028,682	+		AO353_18265	0.68	-0.5
4,028,683	-		AO353_18265	0.68	-0.2
4,028,760	+		AO353_18265	0.72	-0.5
4,028,760	+		AO353_18265	0.72	-1.5
4,028,760	+		AO353_18265	0.72	+0.7
4,028,761	-		AO353_18265	0.72	+1.4
4,028,761	-		AO353_18265	0.72	-3.0
4,028,895	+		AO353_18265	0.80	+2.8
4,028,895	+		AO353_18265	0.80	+0.7
4,028,895	+		AO353_18265	0.80	-1.0
4,028,895	+		AO353_18265	0.80	-1.8
4,028,895	+		AO353_18265	0.80	-2.7
4,028,895	+		AO353_18265	0.80	-0.8
4,028,895	+		AO353_18265	0.80	-1.4
4,028,895	+		AO353_18265	0.80	+0.6
4,028,895	+		AO353_18265	0.80	-2.7
4,028,896	-		AO353_18265	0.80	-1.2
4,028,896	-		AO353_18265	0.80	+3.8
4,028,896	-		AO353_18265	0.80	-1.4
4,028,896	-		AO353_18265	0.80	-2.1
4,028,896	-		AO353_18265	0.80	-0.5
4,028,896	-		AO353_18265	0.80	-0.2
4,028,896	-		AO353_18265	0.80	+1.2
4,028,896	-		AO353_18265	0.80	-1.4
4,028,896	-		AO353_18265	0.80	+1.2
4,028,896	-		AO353_18265	0.80	+1.0
4,029,047	+		AO353_18265	0.88	+1.1
4,029,047	+		AO353_18265	0.88	+1.5
4,029,047	+		AO353_18265	0.88	-1.7
4,029,047	+		AO353_18265	0.88	-2.7
4,029,047	+		AO353_18265	0.88	+0.5
4,029,048	-		AO353_18265	0.88	-2.1
4,029,048	-		AO353_18265	0.88	-1.8
4,029,090	+				-0.2
4,029,091	-				-1.5
4,029,091	-				+2.0
4,029,174	+				-1.7
4,029,174	+				-0.8
4,029,174	+				+2.6
4,029,175	-				+1.0
4,029,175	-				-2.2
4,029,175	-				-0.8
4,029,175	-				+0.5
4,029,177	+				-0.3
4,029,178	-				-0.2
4,029,178	-				+0.2
4,029,178	-				+0.2
4,029,178	-				+1.7
4,029,181	+				+0.2
4,029,181	+				-0.2
4,029,181	+				+2.1
4,029,181	+				+0.9
4,029,181	+				+0.2
4,029,181	+				+0.2
4,029,181	+				+0.8
4,029,181	+				-2.0
4,029,181	+				+1.2
4,029,181	+				+0.2
4,029,181	+				+0.5
4,029,181	+				+0.2
4,029,182	-				+0.0
4,029,182	-				-2.0
4,029,182	-				-0.2
4,029,182	-				-0.2
4,029,182	-				-1.2
4,029,182	-				-1.4
4,029,182	-				-1.5
4,029,182	-				-0.8
4,029,182	-				+0.1
4,029,182	-				+2.4
4,029,183	+				-1.5
4,029,183	+				-0.7
4,029,183	+				+0.2
4,029,183	+				-0.8
4,029,183	+				-1.2
4,029,183	+				-0.2
4,029,183	+				-1.2
4,029,183	+				-1.8
4,029,183	+				-0.6
4,029,183	+				+0.6
4,029,183	+				+1.0
4,029,183	+				-2.5
4,029,183	+				-0.8
4,029,183	+				+0.2
4,029,183	+				-1.7
4,029,183	+				-0.5
4,029,183	+				-1.2
4,029,183	+				+1.2
4,029,183	+				-2.1
4,029,183	+				-2.0
4,029,183	+				-1.7
4,029,183	+				-2.0
4,029,183	+				+0.8
4,029,183	+				+0.7
4,029,183	+				+0.8
4,029,183	+				-0.8
4,029,183	+				-1.0
4,029,184	-				+0.2
4,029,184	-				-1.9
4,029,184	-				+1.8
4,029,184	-				-0.2
4,029,184	-				-0.8
4,029,184	-				-1.7
4,029,184	-				-1.2
4,029,184	-				+1.3
4,029,184	-				-2.0
4,029,184	-				-1.4
4,029,184	-				+1.8
4,029,184	-				+1.8
4,029,184	-				+1.8
4,029,184	-				+2.4
4,029,184	-				+1.2
4,029,184	-				-0.5
4,029,184	-				-0.5
4,029,184	-				-0.8
4,029,184	-				-1.5
4,029,184	-				-1.5
4,029,184	-				+0.2
4,029,184	-				-0.8
4,029,184	-				-0.8
4,029,184	-				-0.5
4,029,184	-				+0.8
4,029,184	-				-1.2
4,029,184	-				-1.4
4,029,184	-				+3.1
4,029,184	-				-2.5
4,029,184	-				-1.0
4,029,184	-				+1.0
4,029,184	-				-0.8
4,029,184	-				-1.0
4,029,184	-				+0.2
4,029,184	-				-0.1
4,029,184	-				-0.5
4,029,184	-				-1.7
4,029,184	-				-0.4
4,029,236	-				-0.5
4,029,261	+				-1.8
4,029,261	+				-0.8
4,029,261	+				-0.8
4,029,273	+				+2.0
4,029,273	+				+1.7
4,029,273	+				-1.4
4,029,274	-				-1.2
4,029,285	+				+1.8
4,029,323	+				-1.0
4,029,323	+				-0.2
4,029,323	+				+2.2
4,029,323	+				-2.0
4,029,324	-				+0.7
4,029,324	-				-1.7
4,029,324	-				+3.7
4,029,324	-				+0.9
4,029,358	-				+1.0
4,029,358	-				-0.0
4,029,577	+		AO353_18270	0.40	+2.5
4,029,578	-		AO353_18270	0.40	-0.2
4,029,578	-		AO353_18270	0.40	-0.5
4,029,578	-		AO353_18270	0.40	+0.2
4,029,608	-		AO353_18270	0.45	-1.7
4,029,608	-		AO353_18270	0.45	-0.8
4,029,649	+		AO353_18270	0.53	+2.0
4,029,650	-		AO353_18270	0.53	+2.8
4,029,732	+		AO353_18270	0.68	-1.4
4,029,750	+		AO353_18270	0.71	-1.0
4,029,750	+		AO353_18270	0.71	-0.8
4,029,750	+		AO353_18270	0.71	-0.8
4,029,751	-		AO353_18270	0.71	+0.5
4,029,751	-		AO353_18270	0.71	-0.8
4,029,751	-		AO353_18270	0.71	+0.9
4,029,751	-		AO353_18270	0.71	-0.1
4,029,751	-		AO353_18270	0.71	-1.2
4,029,751	-		AO353_18270	0.71	-1.5
4,029,751	-		AO353_18270	0.71	-1.5
4,029,751	-		AO353_18270	0.71	-0.2
4,029,875	+				-0.2
4,029,875	+				+0.3
4,029,875	+				-1.0
4,029,875	+				-0.8
4,029,875	+				-0.2
4,029,875	+				+0.8
4,029,875	+				-1.5
4,029,875	+				+0.8
4,029,876	-				-0.8
4,029,876	-				-0.5
4,029,876	-				+2.8
4,029,876	-				-2.0
4,029,876	-				-0.2
4,029,876	-				+1.0
4,029,876	-				+2.6
4,029,876	-				+0.5
4,029,878	+				-0.5
4,029,878	+				-0.5
4,029,878	+				-1.2
4,029,878	+				-1.7
4,029,878	+				+1.5
4,029,878	+				+0.2
4,029,879	-				+1.0
4,029,879	-				-0.5
4,029,879	-				-0.2
4,030,049	+		AO353_18275	0.17	-1.4
4,030,049	+		AO353_18275	0.17	+0.5
4,030,049	+		AO353_18275	0.17	+2.3
4,030,049	+		AO353_18275	0.17	-1.0
4,030,049	+		AO353_18275	0.17	-0.2
4,030,049	+		AO353_18275	0.17	-0.5
4,030,050	-		AO353_18275	0.17	-0.2
4,030,050	-		AO353_18275	0.17	+3.0
4,030,050	-		AO353_18275	0.17	+0.8
4,030,053	+		AO353_18275	0.17	-1.8
4,030,053	+		AO353_18275	0.17	+1.8
4,030,053	+		AO353_18275	0.17	-0.8
4,030,053	+		AO353_18275	0.17	+2.4
4,030,053	+		AO353_18275	0.17	-0.8
4,030,053	+		AO353_18275	0.17	-1.8
4,030,053	+		AO353_18275	0.17	-2.0
4,030,053	+		AO353_18275	0.17	-1.9
4,030,054	-		AO353_18275	0.17	-1.4
4,030,054	-		AO353_18275	0.17	-1.7
4,030,054	-		AO353_18275	0.17	-0.8
4,030,054	-		AO353_18275	0.17	+0.6
4,030,054	-		AO353_18275	0.17	-1.0
4,030,054	-		AO353_18275	0.17	+0.2
4,030,054	-		AO353_18275	0.17	+2.4
4,030,054	-		AO353_18275	0.17	-1.2
4,030,080	+		AO353_18275	0.21	-1.0
4,030,080	+		AO353_18275	0.21	-1.2
4,030,176	+		AO353_18275	0.33	+2.0
4,030,177	-		AO353_18275	0.33	+1.7
4,030,177	-		AO353_18275	0.33	+0.8
4,030,177	-		AO353_18275	0.33	-1.9
4,030,177	-		AO353_18275	0.33	-1.0
4,030,211	+		AO353_18275	0.37	-1.2
4,030,216	+		AO353_18275	0.38	+1.6
4,030,216	+		AO353_18275	0.38	-1.8
4,030,216	+		AO353_18275	0.38	+0.8
4,030,285	+		AO353_18275	0.46	-1.0
4,030,286	-		AO353_18275	0.46	-0.8
4,030,329	+		AO353_18275	0.52	+3.6
4,030,329	+		AO353_18275	0.52	+0.2
4,030,387	+		AO353_18275	0.59	+2.1
4,030,387	+		AO353_18275	0.59	-0.5
4,030,388	-		AO353_18275	0.59	+1.8
4,030,388	-		AO353_18275	0.59	+0.6
4,030,388	-		AO353_18275	0.59	+0.2
4,030,388	-		AO353_18275	0.59	+1.8
4,030,388	-		AO353_18275	0.59	-1.4
4,030,521	+		AO353_18275	0.75	+3.9
4,030,559	+		AO353_18275	0.80	+0.8
4,030,560	-		AO353_18275	0.80	-3.5
4,030,671	+				+3.3
4,030,671	+				+0.6
4,030,671	+				-0.5
4,030,671	+				-0.9
4,030,671	+				+1.8
4,030,672	-				-0.0
4,030,681	-				-1.7
4,030,681	-				-0.2
4,030,681	-				+2.5
4,030,710	+				-1.5
4,030,710	+				+0.8
4,030,710	+				+1.6
4,030,711	-				+3.3
4,030,844	+		AO353_18280	0.12	-2.2
4,030,844	+		AO353_18280	0.12	-1.0
4,030,844	+		AO353_18280	0.12	-1.5
4,030,845	-		AO353_18280	0.12	-1.0
4,030,850	+		AO353_18280	0.13	-0.8
4,030,850	+		AO353_18280	0.13	+1.5
4,030,850	+				+1.8
4,030,850	+		AO353_18280	0.13	+0.8
4,030,850	+		AO353_18280	0.13	-1.2
4,030,850	+		AO353_18280	0.13	-0.2
4,030,851	-		AO353_18280	0.13	+1.8
4,030,851	-		AO353_18280	0.13	-0.5
4,030,851	-		AO353_18280	0.13	+0.7
4,030,851	-		AO353_18280	0.13	-1.0
4,030,851	-		AO353_18280	0.13	+1.8
4,030,851	-		AO353_18280	0.13	-1.5
4,030,851	-		AO353_18280	0.13	+1.0
4,030,851	-		AO353_18280	0.13	+0.8
4,030,851	-		AO353_18280	0.13	+2.1
4,030,902	+		AO353_18280	0.18	-2.4
4,030,902	+		AO353_18280	0.18	-1.0
4,030,902	+		AO353_18280	0.18	-2.5
4,030,902	+		AO353_18280	0.18	-1.0
4,030,902	+		AO353_18280	0.18	-1.0
4,030,903	-		AO353_18280	0.19	+0.2