Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18095

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
3,983,579	+		AO353_18085	0.84	+0.9
3,983,602	+		AO353_18085	0.86	+0.9
3,983,603	-		AO353_18085	0.86	-0.8
3,983,654	+				+2.6
3,983,654	+				+0.6
3,983,728	+				+0.2
3,983,728	+				-1.2
3,983,728	+				+0.2
3,983,728	+				+0.4
3,983,729	-				-2.2
3,983,729	-				-0.2
3,983,729	-				-1.0
3,983,732	+				-0.7
3,983,768	+				+0.8
3,983,768	+				-0.8
3,983,768	+				-2.0
3,983,768	+				-1.0
3,983,768	+				+0.2
3,983,770	+				-1.5
3,983,771	-				-0.2
3,983,771	-				+2.7
3,983,792	+				-0.5
3,983,792	+				+3.4
3,983,803	+				+2.9
3,983,804	-				+0.8
3,983,850	-				-1.7
3,983,850	-				+1.1
3,983,869	-				-1.4
3,983,869	-				-2.6
3,983,946	-		AO353_18090	0.22	+2.5
3,983,964	+		AO353_18090	0.25	+2.8
3,983,965	-		AO353_18090	0.25	-0.5
3,983,965	-		AO353_18090	0.25	+5.0
3,983,971	+		AO353_18090	0.26	-0.8
3,984,035	-		AO353_18090	0.36	+0.4
3,984,062	+		AO353_18090	0.41	-0.5
3,984,079	+		AO353_18090	0.43	-0.5
3,984,080	-		AO353_18090	0.44	-2.0
3,984,080	-		AO353_18090	0.44	-1.0
3,984,090	+		AO353_18090	0.45	-1.2
3,984,094	+		AO353_18090	0.46	+4.8
3,984,095	-		AO353_18090	0.46	+1.8
3,984,121	-		AO353_18090	0.50	+0.2
3,984,171	+		AO353_18090	0.58	-1.8
3,984,172	-		AO353_18090	0.59	-0.3
3,984,172	-		AO353_18090	0.59	+1.9
3,984,277	+		AO353_18090	0.76	+1.8
3,984,277	+		AO353_18090	0.76	+2.3
3,984,353	+		AO353_18090	0.88	-2.6
3,984,357	+		AO353_18090	0.89	-0.5
3,984,357	+		AO353_18090	0.89	+0.6
3,984,357	+		AO353_18090	0.89	+0.6
3,984,357	+		AO353_18090	0.89	+3.8
3,984,358	-		AO353_18090	0.89	+1.2
3,984,358	-		AO353_18090	0.89	+1.3
3,984,358	-		AO353_18090	0.89	+2.4
3,984,358	-		AO353_18090	0.89	-0.8
3,984,358	-		AO353_18090	0.89	-0.8
3,984,358	-		AO353_18090	0.89	+1.5
3,984,378	-				+1.9
3,984,378	-				-2.1
3,984,378	-				-2.4
3,984,378	-				-1.4
3,984,438	-				+0.8
3,984,438	-				-0.8
3,984,543	+		AO353_18095	0.12	-1.5
3,984,543	+		AO353_18095	0.12	-1.2
3,984,569	-		AO353_18095	0.16	+0.2
3,984,626	-		AO353_18095	0.25	-0.9
3,984,761	-		AO353_18095	0.47	-1.0
3,984,780	+		AO353_18095	0.50	+0.8
3,984,807	-		AO353_18095	0.54	-0.8
3,984,815	+		AO353_18095	0.56	-1.4
3,984,966	+		AO353_18095	0.80	-2.0
3,985,006	+		AO353_18095	0.87	-0.7
3,985,007	-		AO353_18095	0.87	-0.5
3,985,085	-				+0.2
3,985,148	+				-0.8
3,985,149	-				+0.2
3,985,149	-				-2.7
3,985,157	+				-0.2
3,985,158	-				-0.5
3,985,167	+				+0.2
3,985,249	+				-0.2
3,985,250	-				-1.7
3,985,287	-				+0.2
3,985,355	+				-1.0
3,985,355	+				-0.2
3,985,380	+				-1.9
3,985,380	+				-0.5
3,985,380	+				-0.2
3,985,386	+				-0.8
3,985,386	+				+2.0
3,985,386	+				+1.2
3,985,387	-				+3.6
3,985,387	-				-0.9
3,985,387	-				+2.2
3,985,387	-				-0.0
3,985,387	-				-0.2
3,985,387	-				+0.7
3,985,387	-				-0.0
3,985,404	+				-0.5
3,985,405	-				-1.7
3,985,411	+				-1.5
3,985,411	+				-0.9
3,985,411	+				-3.0
3,985,411	+				-1.0
3,985,411	+				-0.5
3,985,411	+				-1.7
3,985,412	-				-0.2
3,985,412	-				+0.2
3,985,412	-				+0.8
3,985,412	-				+2.2
3,985,412	-				-1.9
3,985,412	-				-1.0
3,985,412	-				-1.7
3,985,412	-				-1.0
3,985,412	-				+3.8
3,985,446	+				-1.8
3,985,479	+				-0.8
3,985,479	+				-1.7
3,985,479	+				-0.4
3,985,479	+				-0.0
3,985,479	+				+1.8
3,985,479	+				-1.0
3,985,480	-				-1.5
3,985,480	-				+2.1
3,985,484	+				-0.5
3,985,484	+				-0.5
3,985,484	+				-0.3
3,985,484	+				-0.2
3,985,484	+				+0.3
3,985,485	-				-0.0
3,985,485	-				+2.4
3,985,499	+				-1.0
3,985,499	+				-2.0
3,985,499	+				+0.2
3,985,499	+				-1.5
3,985,499	+				+3.4
3,985,499	+				-1.9
3,985,499	+				-1.5
3,985,499	+				-0.8
3,985,499	+				-1.4
3,985,499	+				+0.2
3,985,500	-				-0.4
3,985,500	-				-0.8
3,985,500	-				-2.1
3,985,500	-				-1.2
3,985,500	-				+0.8
3,985,500	-				+2.7
3,985,500	-				-0.5
3,985,500	-				-0.5
3,985,507	+				+0.2
3,985,508	-				+0.2
3,985,516	+				-0.8
3,985,516	+				-0.2
3,985,517	-				-0.5
3,985,609	+				+1.1
3,985,612	+				+0.2
3,985,612	+				-0.2
3,985,612	+				+4.0
3,985,612	+				-2.4
3,985,613	-				+2.3
3,985,613	-				-0.8
3,985,613	-				-0.2
3,985,667	+				+1.1
3,985,745	+				-0.0
3,985,745	+				-0.2
3,985,745	+				+1.5
3,985,746	-				+0.8
3,985,746	-				+1.8
3,985,746	-				-0.2
3,985,746	-				+2.6
3,985,746	-				+1.4
3,985,746	-				-0.9
3,985,747	+				+1.0
3,985,747	+				+1.6
3,985,747	+				-1.7
3,985,747	+				+0.4
3,985,748	-				+3.1
3,985,748	-				-1.5
3,985,748	-				-1.2
3,985,748	-				-0.2
3,985,748	-				-0.5
3,985,748	-				-1.2
3,985,748	-				+1.9
3,985,748	-				+0.8
3,985,749	-				+2.5
3,985,801	+				-0.8
3,985,910	-				-1.4
3,986,025	+				-1.4
3,986,025	+				-2.1
3,986,025	+				-0.8
3,986,026	-				-0.7
3,986,026	-				+1.7
3,986,026	-				+3.3
3,986,053	+				-0.5
3,986,054	-				-2.4
3,986,054	-				-0.2
3,986,054	-				-1.2
3,986,057	+		AO353_18100	0.10	+0.6
3,986,057	+		AO353_18100	0.10	+1.4
3,986,057	+		AO353_18100	0.10	-1.4
3,986,057	+		AO353_18100	0.10	-1.9
3,986,057	+		AO353_18100	0.10	-0.8
3,986,057	+		AO353_18100	0.10	+1.5
3,986,057	+		AO353_18100	0.10	+1.5
3,986,057	+		AO353_18100	0.10	-0.7
3,986,057	+		AO353_18100	0.10	+0.6
3,986,057	+		AO353_18100	0.10	-1.2
3,986,057	+		AO353_18100	0.10	+2.1
3,986,057	+		AO353_18100	0.10	-1.4
3,986,057	+		AO353_18100	0.10	-1.5
3,986,057	+		AO353_18100	0.10	-1.3
3,986,058	-		AO353_18100	0.11	-1.5
3,986,058	-		AO353_18100	0.11	-0.2
3,986,058	-		AO353_18100	0.11	-1.4
3,986,058	-		AO353_18100	0.11	+0.2
3,986,058	-		AO353_18100	0.11	+1.3
3,986,058	-		AO353_18100	0.11	-2.2
3,986,058	-		AO353_18100	0.11	-0.2
3,986,058	-		AO353_18100	0.11	-1.0
3,986,058	-		AO353_18100	0.11	-0.8
3,986,058	-		AO353_18100	0.11	-0.8
3,986,058	-		AO353_18100	0.11	-1.2
3,986,061	+		AO353_18100	0.11	-0.5
3,986,061	+		AO353_18100	0.11	+1.2
3,986,061	+		AO353_18100	0.11	-1.0
3,986,061	+		AO353_18100	0.11	-1.0
3,986,061	+		AO353_18100	0.11	+1.8
3,986,062	-		AO353_18100	0.11	+1.4
3,986,062	-		AO353_18100	0.11	-1.8
3,986,062	-		AO353_18100	0.11	-0.0
3,986,062	-		AO353_18100	0.11	-0.8