Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17150

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
3,790,374	+		AO353_17145	0.74	+0.8
3,790,374	+		AO353_17145	0.74	+1.9
3,790,374	+		AO353_17145	0.74	+0.4
3,790,374	+		AO353_17145	0.74	-0.4
3,790,374	+		AO353_17145	0.74	-0.6
3,790,374	+		AO353_17145	0.74	+0.6
3,790,375	-		AO353_17145	0.74	+0.4
3,790,375	-		AO353_17145	0.74	-1.1
3,790,375	-		AO353_17145	0.74	-1.2
3,790,375	-		AO353_17145	0.74	-0.6
3,790,382	+		AO353_17145	0.75	+2.9
3,790,382	+		AO353_17145	0.75	-0.9
3,790,382	+		AO353_17145	0.75	-0.4
3,790,383	-		AO353_17145	0.75	+0.4
3,790,383	-		AO353_17145	0.75	-0.1
3,790,383	-		AO353_17145	0.75	+1.6
3,790,383	-		AO353_17145	0.75	+0.6
3,790,383	-		AO353_17145	0.75	+1.4
3,790,383	-		AO353_17145	0.75	-1.6
3,790,383	-		AO353_17145	0.75	-1.1
3,790,533	+		AO353_17145	0.81	+0.3
3,790,533	+		AO353_17145	0.81	-1.6
3,790,533	+		AO353_17145	0.81	-1.4
3,790,533	+		AO353_17145	0.81	-0.6
3,790,533	+		AO353_17145	0.81	-0.4
3,790,533	+		AO353_17145	0.81	-0.9
3,790,533	+		AO353_17145	0.81	+0.9
3,790,533	+		AO353_17145	0.81	+0.5
3,790,533	+		AO353_17145	0.81	-0.1
3,790,533	+		AO353_17145	0.81	+1.9
3,790,534	-		AO353_17145	0.81	+0.9
3,790,534	-		AO353_17145	0.81	-1.4
3,790,534	-		AO353_17145	0.81	-1.8
3,790,534	-		AO353_17145	0.81	+1.9
3,790,534	-		AO353_17145	0.81	-0.4
3,790,534	-		AO353_17145	0.81	-1.2
3,790,534	-		AO353_17145	0.81	-2.2
3,790,534	-		AO353_17145	0.81	-1.5
3,790,534	-		AO353_17145	0.81	-0.9
3,790,534	-		AO353_17145	0.81	+0.9
3,790,534	-		AO353_17145	0.81	+0.8
3,790,534	-		AO353_17145	0.81	-1.0
3,790,581	+		AO353_17145	0.83	+0.4
3,790,581	+		AO353_17145	0.83	-2.6
3,790,581	+		AO353_17145	0.83	+0.1
3,790,581	+		AO353_17145	0.83	-0.6
3,790,581	+		AO353_17145	0.83	-0.4
3,790,581	+		AO353_17145	0.83	+0.4
3,790,581	+		AO353_17145	0.83	-2.0
3,790,582	-		AO353_17145	0.83	-0.4
3,790,582	-		AO353_17145	0.83	-1.5
3,790,582	-		AO353_17145	0.83	-1.2
3,790,582	-		AO353_17145	0.83	+0.1
3,790,582	-		AO353_17145	0.83	-1.9
3,790,582	-		AO353_17145	0.83	-1.1
3,790,582	-		AO353_17145	0.83	+0.4
3,790,626	-		AO353_17145	0.85	+0.2
3,790,639	+		AO353_17145	0.86	-1.1
3,790,639	+		AO353_17145	0.86	-0.4
3,790,639	+		AO353_17145	0.86	-3.1
3,790,639	+		AO353_17145	0.86	-0.1
3,790,639	+		AO353_17145	0.86	-0.6
3,790,639	+		AO353_17145	0.86	+0.4
3,790,640	-		AO353_17145	0.86	+0.7
3,790,640	-		AO353_17145	0.86	-1.5
3,790,680	+		AO353_17145	0.88	-0.5
3,790,738	+				-0.6
3,790,805	-				-0.9
3,790,860	+				-1.4
3,790,860	+				-1.6
3,790,860	+				+1.1
3,790,861	-				+2.3
3,790,861	-				-0.1
3,790,868	+				-0.6
3,790,869	-				-2.8
3,790,869	-				+4.3
3,790,885	+				-1.1
3,790,886	-				-3.5
3,791,022	+				-0.9
3,791,022	+				-0.7
3,791,022	+				-0.9
3,791,022	+				+2.5
3,791,023	-				+1.3
3,791,023	-				+1.9
3,791,023	-				-1.2
3,791,023	-				-0.7
3,791,023	-				-0.4
3,791,024	+				-2.0
3,791,024	+				+0.3
3,791,024	+				-1.4
3,791,025	-				-1.1
3,791,025	-				+1.9
3,791,025	-				+1.6
3,791,025	-				-2.1
3,791,025	-				-1.1
3,791,098	+				-1.1
3,791,104	+				+1.7
3,791,104	+				+0.4
3,791,104	+				-1.8
3,791,104	+				+0.0
3,791,104	+				-1.5
3,791,105	-				-1.5
3,791,105	-				-1.2
3,791,158	+				+0.9
3,791,158	+				+0.9
3,791,159	-				+2.3
3,791,159	-				+0.0
3,791,159	-				-0.9
3,791,187	+				+1.6
3,791,188	-				-1.5
3,791,188	-				+0.8
3,791,188	-				+0.9
3,791,234	+				+0.6
3,791,235	-				+0.3
3,791,235	-				-2.5
3,791,235	-				-1.5
3,791,235	-				-0.4
3,791,240	+				-1.2
3,791,240	+				+2.1
3,791,240	+				-0.1
3,791,240	+				-0.9
3,791,241	-				+2.5
3,791,241	-				-0.1
3,791,241	-				-1.7
3,791,241	-				+0.3
3,791,241	-				-2.5
3,791,339	+				-1.1
3,791,355	-				+1.2
3,791,414	+		AO353_17150	0.12	+1.9
3,791,433	+		AO353_17150	0.13	-1.4
3,791,433	+		AO353_17150	0.13	-1.8
3,791,434	-		AO353_17150	0.13	-1.1
3,791,434	-		AO353_17150	0.13	+4.6
3,791,434	-		AO353_17150	0.13	-1.5
3,791,604	+		AO353_17150	0.26	+0.6
3,791,604	+		AO353_17150	0.26	+0.5
3,791,604	+		AO353_17150	0.26	+1.6
3,791,605	-		AO353_17150	0.26	-0.4
3,791,605	-		AO353_17150	0.26	-1.4
3,791,605	-		AO353_17150	0.26	+3.5
3,791,605	-		AO353_17150	0.26	+1.9
3,791,605	-		AO353_17150	0.26	-0.4
3,791,605	-		AO353_17150	0.26	+1.3
3,791,952	+		AO353_17150	0.52	+1.5
3,791,952	+		AO353_17150	0.52	-2.6
3,791,952	+		AO353_17150	0.52	-3.0
3,791,952	+		AO353_17150	0.52	+1.8
3,791,952	+				-0.1
3,791,952	+		AO353_17150	0.52	+2.3
3,791,952	+		AO353_17150	0.52	+0.9
3,791,952	+		AO353_17150	0.52	+2.2
3,791,952	+		AO353_17150	0.52	+0.2
3,791,952	+		AO353_17150	0.52	+0.8
3,791,952	+		AO353_17150	0.52	-0.7
3,791,952	+		AO353_17150	0.52	+1.3
3,791,952	+		AO353_17150	0.52	+0.3
3,791,952	+		AO353_17150	0.52	+2.8
3,791,952	+		AO353_17150	0.52	-0.9
3,791,952	+		AO353_17150	0.52	-0.4
3,791,953	-		AO353_17150	0.52	-1.2
3,791,953	-		AO353_17150	0.52	+0.3
3,791,953	-		AO353_17150	0.52	-0.1
3,791,953	-		AO353_17150	0.52	-0.4
3,791,953	-		AO353_17150	0.52	-2.5
3,791,953	-		AO353_17150	0.52	-0.1
3,791,953	-		AO353_17150	0.52	+1.3
3,791,953	-		AO353_17150	0.52	-0.1
3,791,953	-		AO353_17150	0.52	+0.5
3,791,953	-		AO353_17150	0.52	-1.1
3,791,953	-		AO353_17150	0.52	-1.4
3,791,953	-		AO353_17150	0.52	+1.9
3,791,953	-		AO353_17150	0.52	-0.9
3,791,960	+		AO353_17150	0.52	+1.5
3,791,961	-		AO353_17150	0.52	-2.1
3,791,991	+		AO353_17150	0.54	-1.2
3,791,992	-		AO353_17150	0.55	-1.1
3,791,992	-		AO353_17150	0.55	-1.1
3,792,240	+		AO353_17150	0.73	+0.5
3,792,240	+		AO353_17150	0.73	+0.9
3,792,241	-		AO353_17150	0.73	-0.7
3,792,241	-		AO353_17150	0.73	-1.2
3,792,241	-		AO353_17150	0.73	-0.1
3,792,241	-		AO353_17150	0.73	+0.6
3,792,249	+		AO353_17150	0.74	+0.2
3,792,249	+		AO353_17150	0.74	-0.4
3,792,249	+		AO353_17150	0.74	+0.6
3,792,249	+		AO353_17150	0.74	+0.3
3,792,249	+		AO353_17150	0.74	-1.7
3,792,249	+		AO353_17150	0.74	+0.3
3,792,249	+		AO353_17150	0.74	+2.8
3,792,249	+		AO353_17150	0.74	+1.6
3,792,249	+		AO353_17150	0.74	+1.3
3,792,250	-		AO353_17150	0.74	-1.1
3,792,250	-		AO353_17150	0.74	-1.5
3,792,250	-		AO353_17150	0.74	+0.3
3,792,250	-		AO353_17150	0.74	+0.9
3,792,250	-		AO353_17150	0.74	-1.2
3,792,251	+		AO353_17150	0.74	-1.8
3,792,251	+		AO353_17150	0.74	+2.3
3,792,251	+		AO353_17150	0.74	+1.8
3,792,251	+		AO353_17150	0.74	+1.9
3,792,251	+		AO353_17150	0.74	-1.5
3,792,252	-		AO353_17150	0.74	+1.3
3,792,252	-		AO353_17150	0.74	+0.3
3,792,252	-		AO353_17150	0.74	+0.5
3,792,261	+		AO353_17150	0.74	+2.1
3,792,261	+		AO353_17150	0.74	+1.6
3,792,262	-		AO353_17150	0.75	-0.1
3,792,333	+		AO353_17150	0.80	+2.4
3,792,333	+		AO353_17150	0.80	-1.5
3,792,333	+		AO353_17150	0.80	+2.7
3,792,334	-		AO353_17150	0.80	+2.4
3,792,334	-		AO353_17150	0.80	-0.7
3,792,468	+		AO353_17150	0.90	+1.2
3,792,468	+		AO353_17150	0.90	-0.4
3,792,468	+		AO353_17150	0.90	-1.4
3,792,468	+		AO353_17150	0.90	+1.1
3,792,469	-		AO353_17150	0.90	+0.2
3,792,469	-		AO353_17150	0.90	-0.5
3,792,497	+				+0.1
3,792,497	+				+0.2
3,792,497	+				-1.1
3,792,497	+				-0.9
3,792,497	+				-1.2
3,792,498	-				+0.8
3,792,603	+				-1.5
3,792,603	+				-1.2
3,792,603	+				+0.5
3,792,603	+				+1.6
3,792,603	+				-1.7
3,792,604	-				-2.3
3,792,604	-				-2.5
3,792,664	-				+1.4
3,792,730	-				-0.4
3,792,874	+				-0.1
3,792,874	+				-0.9
3,792,874	+				-1.2
3,792,875	-				-0.9
3,793,079	+		AO353_17155	0.14	+1.9
3,793,124	+		AO353_17155	0.16	-0.4
3,793,124	+		AO353_17155	0.16	-0.4
3,793,124	+		AO353_17155	0.16	-0.7
3,793,124	+		AO353_17155	0.16	-0.7
3,793,124	+		AO353_17155	0.16	+0.3
3,793,124	+		AO353_17155	0.16	+1.4
3,793,124	+		AO353_17155	0.16	+1.9
3,793,124	+		AO353_17155	0.16	-1.2
3,793,124	+		AO353_17155	0.16	-0.1
3,793,125	-		AO353_17155	0.16	-0.1
3,793,125	-		AO353_17155	0.16	+1.1
3,793,125	-		AO353_17155	0.16	-0.4
3,793,125	-		AO353_17155	0.16	-1.3
3,793,125	-		AO353_17155	0.16	-2.2
3,793,125	-		AO353_17155	0.16	+1.5
3,793,125	-		AO353_17155	0.16	+0.3
3,793,295	+		AO353_17155	0.22	+0.1
3,793,295	+		AO353_17155	0.22	-0.7
3,793,295	+		AO353_17155	0.22	+0.9
3,793,295	+		AO353_17155	0.22	-0.4
3,793,296	-		AO353_17155	0.22	-0.9
3,793,296	-		AO353_17155	0.22	-2.0
3,793,296	-		AO353_17155	0.22	-0.1
3,793,430	+		AO353_17155	0.26	-1.2
3,793,430	+		AO353_17155	0.26	-0.9
3,793,431	-		AO353_17155	0.26	-0.9
3,793,431	-		AO353_17155	0.26	-1.2
3,793,431	-		AO353_17155	0.26	-1.1
3,793,431	-		AO353_17155	0.26	+0.3
3,793,431	-		AO353_17155	0.26	+0.5
3,793,431	-		AO353_17155	0.26	-2.2
3,793,431	-		AO353_17155	0.26	-2.1
3,793,431	-		AO353_17155	0.26	-1.1
3,793,431	-		AO353_17155	0.26	-0.1
3,793,431	-		AO353_17155	0.26	-1.0