Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17020

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
3,760,215	+		AO353_17010	0.72	+1.7
3,760,216	-		AO353_17010	0.72	-0.9
3,760,216	-		AO353_17010	0.72	+1.2
3,760,348	+		AO353_17010	0.90	-0.8
3,760,349	-		AO353_17010	0.90	+3.8
3,760,349	-		AO353_17010	0.90	-1.5
3,760,349	-		AO353_17010	0.90	+1.3
3,760,424	+				-1.4
3,760,424	+				-0.2
3,760,425	-				+1.9
3,760,533	-				+2.9
3,760,533	-				-1.2
3,760,610	-				+0.9
3,760,615	+				+0.9
3,760,615	+				-0.9
3,760,616	-				+0.3
3,760,616	-				-2.4
3,760,665	+		AO353_17015	0.11	-1.3
3,760,665	+		AO353_17015	0.11	+1.1
3,760,665	+		AO353_17015	0.11	-0.7
3,760,665	+		AO353_17015	0.11	+1.9
3,760,665	+		AO353_17015	0.11	-0.9
3,760,665	+		AO353_17015	0.11	+0.9
3,760,665	+		AO353_17015	0.11	-0.7
3,760,665	+		AO353_17015	0.11	+0.3
3,760,665	+		AO353_17015	0.11	-1.2
3,760,665	+		AO353_17015	0.11	-1.1
3,760,665	+		AO353_17015	0.11	+0.9
3,760,665	+		AO353_17015	0.11	-1.1
3,760,666	-		AO353_17015	0.11	-1.0
3,760,666	-		AO353_17015	0.11	-0.1
3,760,666	-		AO353_17015	0.11	+0.9
3,760,666	-		AO353_17015	0.11	-0.3
3,760,666	-		AO353_17015	0.11	+1.9
3,760,666	-		AO353_17015	0.11	+2.9
3,760,666	-		AO353_17015	0.11	+3.4
3,760,666	-		AO353_17015	0.11	-0.4
3,760,666	-		AO353_17015	0.11	+2.8
3,760,666	-		AO353_17015	0.11	+1.9
3,760,743	-		AO353_17015	0.28	-0.9
3,760,801	+		AO353_17015	0.40	-1.5
3,760,801	+		AO353_17015	0.40	+0.9
3,760,802	-		AO353_17015	0.40	-1.8
3,760,825	+		AO353_17015	0.45	+0.9
3,760,826	-		AO353_17015	0.46	+1.3
3,760,938	+		AO353_17015	0.70	-1.5
3,760,938	+		AO353_17015	0.70	+0.9
3,760,939	-		AO353_17015	0.70	+2.5
3,760,939	-		AO353_17015	0.70	+2.9
3,761,043	+				-1.7
3,761,043	+				+0.6
3,761,043	+				+0.1
3,761,044	-				+0.9
3,761,044	-				-1.4
3,761,044	-				-0.2
3,761,044	-				-0.1
3,761,044	-				-0.1
3,761,044	-				-1.4
3,761,044	-				+0.7
3,761,044	-				+3.0
3,761,044	-				+2.1
3,761,054	+				-0.4
3,761,056	+				-0.4
3,761,056	+				-2.5
3,761,056	+				-2.0
3,761,056	+				-0.9
3,761,056	+				-0.4
3,761,056	+				-2.1
3,761,056	+				+0.9
3,761,056	+				-0.3
3,761,057	-				+2.3
3,761,057	-				+2.3
3,761,057	-				-0.7
3,761,057	-				+1.3
3,761,057	-				-1.2
3,761,057	-				-0.9
3,761,057	-				+3.7
3,761,057	-				-0.7
3,761,057	-				-0.4
3,761,057	-				+1.6
3,761,057	-				+2.3
3,761,057	-				+0.8
3,761,057	-				-1.9
3,761,057	-				-1.1
3,761,104	+				+1.6
3,761,104	+				+0.3
3,761,105	-				+2.7
3,761,105	-				-0.9
3,761,108	+				-1.4
3,761,117	-				+1.2
3,761,122	-				+2.3
3,761,391	+				-2.0
3,761,392	-				+0.8
3,761,481	+		AO353_17020	0.14	+1.0
3,761,482	-		AO353_17020	0.14	-0.1
3,761,482	-		AO353_17020	0.14	+0.8
3,761,482	-		AO353_17020	0.14	-0.1
3,761,556	+		AO353_17020	0.18	+0.5
3,761,557	-		AO353_17020	0.18	-0.9
3,761,708	+		AO353_17020	0.25	+0.3
3,761,708	+		AO353_17020	0.25	-0.4
3,761,708	+		AO353_17020	0.25	+0.4
3,761,708	+		AO353_17020	0.25	-1.1
3,761,709	-		AO353_17020	0.25	-0.9
3,761,832	+		AO353_17020	0.30	-0.5
3,761,832	+		AO353_17020	0.30	+0.4
3,761,832	+		AO353_17020	0.30	-0.1
3,761,832	+		AO353_17020	0.30	+0.4
3,761,832	+		AO353_17020	0.30	-1.2
3,761,832	+		AO353_17020	0.30	-0.4
3,761,832	+		AO353_17020	0.30	+1.9
3,761,833	-		AO353_17020	0.31	-1.2
3,761,833	-		AO353_17020	0.31	+1.7
3,761,833	-		AO353_17020	0.31	-0.1
3,761,833	-		AO353_17020	0.31	+3.8
3,761,833	-		AO353_17020	0.31	-1.4
3,761,833	-		AO353_17020	0.31	-1.1
3,761,949	+		AO353_17020	0.36	-1.4
3,761,949	+		AO353_17020	0.36	-1.8
3,761,949	+		AO353_17020	0.36	-1.4
3,761,949	+		AO353_17020	0.36	+0.6
3,761,949	+		AO353_17020	0.36	-0.9
3,761,949	+		AO353_17020	0.36	-2.0
3,761,949	+		AO353_17020	0.36	-1.1
3,761,950	-		AO353_17020	0.36	+0.4
3,761,950	-		AO353_17020	0.36	+2.5
3,761,950	-		AO353_17020	0.36	+1.9
3,761,950	-		AO353_17020	0.36	-0.9
3,761,950	-		AO353_17020	0.36	-0.9
3,761,950	-		AO353_17020	0.36	+3.3
3,761,950	-		AO353_17020	0.36	+2.3
3,761,950	-		AO353_17020	0.36	+0.7
3,762,006	+		AO353_17020	0.39	-2.3
3,762,006	+		AO353_17020	0.39	-0.9
3,762,007	-		AO353_17020	0.39	+0.9
3,762,263	+		AO353_17020	0.51	-3.1
3,762,263	+		AO353_17020	0.51	-1.1
3,762,263	+		AO353_17020	0.51	-1.6
3,762,263	+		AO353_17020	0.51	-1.4
3,762,264	-		AO353_17020	0.51	-0.1
3,762,264	-		AO353_17020	0.51	+0.4
3,762,264	-		AO353_17020	0.51	+0.9
3,762,264	-		AO353_17020	0.51	+0.2
3,762,264	-		AO353_17020	0.51	-2.3
3,762,264	-		AO353_17020	0.51	+1.9
3,762,402	+		AO353_17020	0.57	-1.2
3,762,606	+		AO353_17020	0.67	+1.9
3,762,606	+		AO353_17020	0.67	-0.6
3,762,607	-		AO353_17020	0.67	+2.6
3,763,044	+		AO353_17020	0.87	+0.9
3,763,044	+		AO353_17020	0.87	+0.9
3,763,044	+		AO353_17020	0.87	+0.3
3,763,044	+		AO353_17020	0.87	-1.8
3,763,140	-				-2.2
3,763,280	+				-1.1
3,763,281	-				-0.9
3,763,281	-				-0.4
3,763,315	+				+0.4
3,763,316	-				+0.4
3,763,316	-				-1.2
3,763,357	-				+2.7
3,763,417	+				-0.4
3,763,417	+				-0.4
3,763,417	+				-0.4
3,763,417	+				-1.2
3,763,417	+				+3.4
3,763,417	+				+0.9
3,763,417	+				+0.8
3,763,417	+				+2.8
3,763,418	-				+1.4
3,763,418	-				+0.1
3,763,418	-				+2.2
3,763,418	-				+0.9
3,763,418	-				-0.4
3,763,733	+		AO353_17025	0.13	+3.2
3,763,733	+		AO353_17025	0.13	-0.6
3,763,734	-		AO353_17025	0.13	-1.0
3,763,750	+		AO353_17025	0.14	-1.0
3,763,896	+		AO353_17025	0.20	+1.4
3,763,896	+		AO353_17025	0.20	-1.0
3,763,897	-		AO353_17025	0.20	-0.6
3,764,040	-		AO353_17025	0.26	+2.5
3,764,049	+		AO353_17025	0.26	+1.0
3,764,060	+		AO353_17025	0.27	+0.8
3,764,060	+		AO353_17025	0.27	-0.0
3,764,061	-		AO353_17025	0.27	+0.4
3,764,061	-		AO353_17025	0.27	-0.8
3,764,061	-		AO353_17025	0.27	+2.0
3,764,061	-		AO353_17025	0.27	+4.5
3,764,170	+		AO353_17025	0.31	+1.0
3,764,171	-		AO353_17025	0.31	+3.5
3,764,298	-		AO353_17025	0.37	+3.4
3,764,314	+		AO353_17025	0.37	+3.0
3,764,314	+		AO353_17025	0.37	-0.6
3,764,314	+		AO353_17025	0.37	+0.6
3,764,314	+		AO353_17025	0.37	+1.3
3,764,315	-		AO353_17025	0.37	+1.0
3,764,315	-		AO353_17025	0.37	-1.4
3,764,315	-				+0.4
3,764,315	-		AO353_17025	0.37	+1.4
3,764,315	-		AO353_17025	0.37	+3.0