Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17005

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
3,758,499	+		AO353_16995	0.70	-2.6
3,758,500	-		AO353_16995	0.70	+0.9
3,758,520	+		AO353_16995	0.74	+0.9
3,758,520	+		AO353_16995	0.74	-0.1
3,758,520	+		AO353_16995	0.74	-2.5
3,758,520	+		AO353_16995	0.74	-0.4
3,758,520	+		AO353_16995	0.74	+1.0
3,758,521	-		AO353_16995	0.75	+0.9
3,758,521	-		AO353_16995	0.75	-1.2
3,758,521	-		AO353_16995	0.75	+1.6
3,758,635	+				+0.4
3,758,635	+				-1.9
3,758,635	+				-1.1
3,758,636	-				+0.6
3,758,636	-				-1.1
3,758,636	-				-0.9
3,758,636	-				+0.9
3,758,636	-				+0.6
3,758,636	-				-1.4
3,758,656	+				+0.8
3,758,656	+				+0.3
3,758,657	-				-0.7
3,758,657	-				-1.5
3,758,719	+		AO353_17000	0.15	+0.9
3,758,719	+		AO353_17000	0.15	-1.9
3,758,734	+		AO353_17000	0.18	+2.6
3,758,734	+		AO353_17000	0.18	+1.8
3,758,734	+		AO353_17000	0.18	+0.9
3,758,734	+		AO353_17000	0.18	+2.7
3,758,734	+		AO353_17000	0.18	-1.9
3,758,734	+		AO353_17000	0.18	+3.3
3,758,735	-		AO353_17000	0.18	-1.8
3,758,735	-		AO353_17000	0.18	+2.4
3,758,735	-		AO353_17000	0.18	-2.2
3,758,735	-		AO353_17000	0.18	-2.7
3,758,735	-		AO353_17000	0.18	-0.1
3,758,735	-		AO353_17000	0.18	-1.7
3,758,735	-		AO353_17000	0.18	+1.3
3,758,738	+		AO353_17000	0.18	+1.9
3,758,739	-		AO353_17000	0.19	-0.9
3,758,858	+		AO353_17000	0.43	-1.1
3,759,082	+		AO353_17000	0.88	-2.2
3,759,131	+				+1.3
3,759,131	+				+0.3
3,759,131	+				-0.9
3,759,131	+				+1.7
3,759,131	+				-1.8
3,759,132	-				-2.2
3,759,132	-				+1.2
3,759,132	-				-1.8
3,759,173	+				-0.9
3,759,196	+				-0.7
3,759,235	+				+1.9
3,759,235	+				-0.7
3,759,235	+				+0.3
3,759,235	+				-0.4
3,759,299	-				+0.4
3,759,299	-				-0.3
3,759,338	+				-0.4
3,759,375	+				-1.9
3,759,375	+				-1.9
3,759,376	-				-0.7
3,759,376	-				-1.2
3,759,376	-				+1.5
3,759,394	+				-0.4
3,759,394	+				+0.1
3,759,394	+				-1.8
3,759,394	+				+2.2
3,759,394	+				-0.4
3,759,394	+				-0.1
3,759,394	+				+1.9
3,759,394	+				+2.7
3,759,395	-				+0.1
3,759,395	-				+0.6
3,759,395	-				+1.6
3,759,395	-				+0.6
3,759,555	+		AO353_17005	0.57	+0.7
3,759,567	+		AO353_17005	0.61	-0.1
3,759,567	+		AO353_17005	0.61	+2.6
3,759,567	+		AO353_17005	0.61	+0.3
3,759,567	+		AO353_17005	0.61	-1.8
3,759,568	-		AO353_17005	0.61	+1.9
3,759,619	-		AO353_17005	0.80	+0.2
3,759,673	+				+0.3
3,759,673	+				-1.2
3,759,673	+				+0.9
3,759,673	+				-0.1
3,759,673	+				+1.7
3,759,673	+				-0.4
3,759,674	-				+0.3
3,759,674	-				+2.2
3,759,920	-		AO353_17010	0.33	-0.1
3,759,920	-		AO353_17010	0.33	+2.1
3,759,980	+		AO353_17010	0.41	-0.1
3,759,980	+		AO353_17010	0.41	+2.1
3,759,980	+		AO353_17010	0.41	-0.9
3,759,980	+		AO353_17010	0.41	-1.1
3,759,980	+		AO353_17010	0.41	+0.1
3,759,981	-		AO353_17010	0.41	+1.2
3,759,981	-		AO353_17010	0.41	-1.4
3,759,981	-		AO353_17010	0.41	+1.1
3,760,085	+		AO353_17010	0.55	+1.8
3,760,085	+		AO353_17010	0.55	+0.9
3,760,085	+		AO353_17010	0.55	-1.9
3,760,086	-		AO353_17010	0.55	+1.3
3,760,215	+		AO353_17010	0.72	+1.7
3,760,216	-		AO353_17010	0.72	-0.9
3,760,216	-		AO353_17010	0.72	+1.2
3,760,348	+		AO353_17010	0.90	-0.8
3,760,349	-		AO353_17010	0.90	+3.8
3,760,349	-		AO353_17010	0.90	-1.5
3,760,349	-		AO353_17010	0.90	+1.3
3,760,424	+				-1.4
3,760,424	+				-0.2
3,760,425	-				+1.9
3,760,533	-				+2.9
3,760,533	-				-1.2
3,760,610	-				+0.9
3,760,615	+				+0.9
3,760,615	+				-0.9
3,760,616	-				+0.3
3,760,616	-				-2.4
3,760,665	+		AO353_17015	0.11	-1.3
3,760,665	+		AO353_17015	0.11	+1.1
3,760,665	+		AO353_17015	0.11	-0.7
3,760,665	+		AO353_17015	0.11	+1.9
3,760,665	+		AO353_17015	0.11	-0.9
3,760,665	+		AO353_17015	0.11	+0.9
3,760,665	+		AO353_17015	0.11	-0.7
3,760,665	+		AO353_17015	0.11	+0.3
3,760,665	+		AO353_17015	0.11	-1.2
3,760,665	+		AO353_17015	0.11	-1.1
3,760,665	+		AO353_17015	0.11	+0.9
3,760,665	+		AO353_17015	0.11	-1.1
3,760,666	-		AO353_17015	0.11	-1.0
3,760,666	-		AO353_17015	0.11	-0.1
3,760,666	-		AO353_17015	0.11	+0.9
3,760,666	-		AO353_17015	0.11	-0.3
3,760,666	-		AO353_17015	0.11	+1.9
3,760,666	-		AO353_17015	0.11	+2.9
3,760,666	-		AO353_17015	0.11	+3.4
3,760,666	-		AO353_17015	0.11	-0.4
3,760,666	-		AO353_17015	0.11	+2.8
3,760,666	-		AO353_17015	0.11	+1.9