Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16725

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
3,707,926	+		AO353_16720	0.18	-0.9
3,707,927	-		AO353_16720	0.18	+2.3
3,707,927	-		AO353_16720	0.18	-0.6
3,708,210	+		AO353_16720	0.46	-2.8
3,708,210	+		AO353_16720	0.46	-1.7
3,708,210	+		AO353_16720	0.46	-1.0
3,708,210	+		AO353_16720	0.46	+2.6
3,708,210	+		AO353_16720	0.46	-0.4
3,708,210	+		AO353_16720	0.46	+2.6
3,708,211	-		AO353_16720	0.46	+1.0
3,708,232	+		AO353_16720	0.48	-1.7
3,708,232	+		AO353_16720	0.48	+1.0
3,708,233	-		AO353_16720	0.48	+1.7
3,708,233	-		AO353_16720	0.48	+1.0
3,708,233	-		AO353_16720	0.48	+0.4
3,708,233	-		AO353_16720	0.48	+1.4
3,708,233	-		AO353_16720	0.48	-2.8
3,708,265	+		AO353_16720	0.51	-0.0
3,708,265	+		AO353_16720	0.51	-1.0
3,708,265	+		AO353_16720	0.51	+1.6
3,708,265	+		AO353_16720	0.51	-0.0
3,708,265	+		AO353_16720	0.51	-0.8
3,708,265	+		AO353_16720	0.51	-1.7
3,708,265	+		AO353_16720	0.51	+2.0
3,708,265	+		AO353_16720	0.51	-2.0
3,708,265	+		AO353_16720	0.51	+2.2
3,708,266	-		AO353_16720	0.51	+0.4
3,708,266	-		AO353_16720	0.51	+0.5
3,708,266	-		AO353_16720	0.51	+0.7
3,708,266	-		AO353_16720	0.51	+3.0
3,708,266	-		AO353_16720	0.51	+0.8
3,708,266	-		AO353_16720	0.51	+1.1
3,708,266	-		AO353_16720	0.51	-0.5
3,708,266	-		AO353_16720	0.51	-1.5
3,708,266	-		AO353_16720	0.51	+0.2
3,708,266	-		AO353_16720	0.51	+1.2
3,708,266	-		AO353_16720	0.51	+1.7
3,708,266	-		AO353_16720	0.51	+2.0
3,708,266	-		AO353_16720	0.51	+3.8
3,708,266	-		AO353_16720	0.51	-0.2
3,708,266	-		AO353_16720	0.51	+1.5
3,708,266	-		AO353_16720	0.51	+1.6
3,708,266	-		AO353_16720	0.51	-0.4
3,708,266	-		AO353_16720	0.51	+2.5
3,708,266	-		AO353_16720	0.51	-1.2
3,708,311	+		AO353_16720	0.56	+3.9
3,708,311	+		AO353_16720	0.56	+1.3
3,708,311	+		AO353_16720	0.56	+0.5
3,708,312	-		AO353_16720	0.56	+0.4
3,708,312	-		AO353_16720	0.56	+1.3
3,708,312	-		AO353_16720	0.56	-1.5
3,708,312	-		AO353_16720	0.56	+1.0
3,708,369	+		AO353_16720	0.61	-0.0
3,708,575	+		AO353_16720	0.81	-1.2
3,708,623	+		AO353_16720	0.86	+0.1
3,708,624	-		AO353_16720	0.86	+1.4
3,708,624	-		AO353_16720	0.86	-2.8
3,708,652	-		AO353_16720	0.89	+0.4
3,708,705	+				+1.1
3,708,705	+				-1.0
3,708,705	+				+1.4
3,708,705	+				+0.4
3,708,705	+				+2.0
3,708,705	+				-1.7
3,708,705	+				-1.4
3,708,705	+				-1.5
3,708,706	-				-0.6
3,708,706	-				+0.9
3,708,706	-				+0.4
3,708,706	-				+0.9
3,708,706	-				+1.2
3,708,706	-				-0.4
3,708,850	+				-0.8
3,708,851	-				-1.2
3,708,870	+				-1.0
3,708,871	-				-1.2
3,708,963	+		AO353_16725	0.12	+1.0
3,708,963	+		AO353_16725	0.12	-2.6
3,708,963	+		AO353_16725	0.12	+0.6
3,708,963	+		AO353_16725	0.12	-2.1
3,708,964	-		AO353_16725	0.13	-0.8
3,708,964	-		AO353_16725	0.13	-1.0
3,708,964	-		AO353_16725	0.13	-1.5
3,708,964	-		AO353_16725	0.13	-1.2
3,708,964	-		AO353_16725	0.13	-1.0
3,709,013	+		AO353_16725	0.21	-0.8
3,709,013	+		AO353_16725	0.21	-0.4
3,709,014	-		AO353_16725	0.21	+0.7
3,709,014	-		AO353_16725	0.21	-0.4
3,709,014	-		AO353_16725	0.21	-1.2
3,709,014	-		AO353_16725	0.21	+2.5
3,709,123	+		AO353_16725	0.40	+3.3
3,709,124	-		AO353_16725	0.40	-0.7
3,709,124	-		AO353_16725	0.40	-0.6
3,709,124	-		AO353_16725	0.40	-1.8
3,709,124	-		AO353_16725	0.40	-0.6
3,709,217	+		AO353_16725	0.56	+2.5
3,709,218	-		AO353_16725	0.56	-1.5
3,709,262	+		AO353_16725	0.64	-1.2
3,709,464	+				-1.4
3,709,464	+				-0.4
3,709,465	-				+1.2
3,709,465	-				+0.4
3,709,465	-				+0.4
3,709,465	-				+2.0
3,709,465	-				+1.5
3,709,465	-				-1.4
3,709,465	-				-0.0
3,709,465	-				-1.4
3,709,611	+		AO353_16730	0.77	-1.6
3,709,651	+				+2.0
3,709,704	+				-2.0
3,709,705	-				-0.6
3,709,705	-				+0.7
3,709,705	-				-1.0
3,709,878	+		AO353_16735	0.15	-0.0
3,709,878	+		AO353_16735	0.15	-0.2
3,709,878	+		AO353_16735	0.15	-2.3
3,709,879	-		AO353_16735	0.15	-2.0
3,709,879	-		AO353_16735	0.15	+3.3
3,709,879	-		AO353_16735	0.15	-1.9
3,710,010	+		AO353_16735	0.24	+2.6
3,710,010	+		AO353_16735	0.24	-0.4
3,710,010	+		AO353_16735	0.24	-1.2
3,710,010	+		AO353_16735	0.24	-0.2
3,710,011	-		AO353_16735	0.24	+3.5
3,710,011	-		AO353_16735	0.24	-0.4
3,710,011	-		AO353_16735	0.24	+2.7
3,710,011	-		AO353_16735	0.24	-0.6
3,710,011	-		AO353_16735	0.24	+1.3
3,710,294	-		AO353_16735	0.43	-0.2
3,710,369	+		AO353_16735	0.48	-1.2
3,710,370	-		AO353_16735	0.48	-0.4
3,710,370	-		AO353_16735	0.48	+5.1
3,710,370	-		AO353_16735	0.48	+0.5
3,710,370	-		AO353_16735	0.48	+3.1
3,710,370	-		AO353_16735	0.48	-1.2
3,710,439	+		AO353_16735	0.53	+2.0
3,710,439	+		AO353_16735	0.53	-1.5
3,710,439	+		AO353_16735	0.53	+3.3
3,710,439	+		AO353_16735	0.53	+0.9
3,710,440	-		AO353_16735	0.53	-2.4
3,710,440	-		AO353_16735	0.53	-0.6
3,710,440	-		AO353_16735	0.53	+2.4
3,710,440	-		AO353_16735	0.53	+2.3
3,710,440	-		AO353_16735	0.53	+1.1
3,710,440	-		AO353_16735	0.53	+1.0