Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16665

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
3,698,763	+		AO353_16660	0.11	-0.0
3,698,763	+		AO353_16660	0.11	+2.0
3,698,763	+		AO353_16660	0.11	+2.8
3,698,764	-		AO353_16660	0.11	+0.2
3,698,764	-		AO353_16660	0.11	-1.0
3,698,886	+		AO353_16660	0.23	-1.3
3,698,886	+		AO353_16660	0.23	+0.3
3,698,886	+		AO353_16660	0.23	-0.3
3,698,886	+		AO353_16660	0.23	-2.2
3,698,886	+		AO353_16660	0.23	-1.6
3,698,886	+		AO353_16660	0.23	-0.0
3,698,886	+		AO353_16660	0.23	+0.1
3,698,886	+		AO353_16660	0.23	+2.2
3,698,886	+		AO353_16660	0.23	-0.3
3,698,886	+		AO353_16660	0.23	+0.4
3,698,886	+		AO353_16660	0.23	+3.6
3,698,887	-		AO353_16660	0.23	-0.0
3,698,887	-		AO353_16660	0.23	+2.6
3,698,887	-		AO353_16660	0.23	-2.4
3,698,887	-		AO353_16660	0.23	-0.6
3,699,024	+		AO353_16660	0.37	-0.6
3,699,024	+		AO353_16660	0.37	-1.3
3,699,024	+		AO353_16660	0.37	+0.4
3,699,024	+		AO353_16660	0.37	+2.3
3,699,024	+		AO353_16660	0.37	-1.3
3,699,024	+		AO353_16660	0.37	-1.2
3,699,024	+		AO353_16660	0.37	-2.3
3,699,024	+		AO353_16660	0.37	+0.4
3,699,024	+		AO353_16660	0.37	-0.0
3,699,025	-		AO353_16660	0.37	-1.8
3,699,057	+		AO353_16660	0.40	-1.0
3,699,057	+		AO353_16660	0.40	-1.6
3,699,057	+		AO353_16660	0.40	-0.8
3,699,058	-		AO353_16660	0.40	-1.5
3,699,058	-		AO353_16660	0.40	-0.0
3,699,058	-		AO353_16660	0.40	+0.4
3,699,058	-		AO353_16660	0.40	-1.3
3,699,058	-		AO353_16660	0.40	-1.0
3,699,058	-		AO353_16660	0.40	+0.2
3,699,058	-		AO353_16660	0.40	+2.0
3,699,058	-		AO353_16660	0.40	-0.8
3,699,058	-		AO353_16660	0.40	+1.0
3,699,058	-		AO353_16660	0.40	-0.3
3,699,180	+		AO353_16660	0.52	-0.6
3,699,180	+		AO353_16660	0.52	+1.5
3,699,180	+		AO353_16660	0.52	+1.3
3,699,180	+		AO353_16660	0.52	+1.0
3,699,180	+		AO353_16660	0.52	-1.6
3,699,181	-		AO353_16660	0.53	+2.2
3,699,181	-		AO353_16660	0.53	+1.5
3,699,181	-		AO353_16660	0.53	+1.0
3,699,181	-		AO353_16660	0.53	-0.0
3,699,393	+		AO353_16660	0.74	+1.2
3,699,394	-		AO353_16660	0.74	+2.0
3,699,394	-		AO353_16660	0.74	+3.8
3,699,477	+		AO353_16660	0.82	-0.3
3,699,477	+		AO353_16660	0.82	-0.6
3,699,477	+		AO353_16660	0.82	+3.0
3,699,477	+		AO353_16660	0.82	-1.0
3,699,477	+		AO353_16660	0.82	-0.6
3,699,477	+		AO353_16660	0.82	-0.6
3,699,477	+		AO353_16660	0.82	-0.6
3,699,477	+		AO353_16660	0.82	-0.5
3,699,477	+		AO353_16660	0.82	+2.2
3,699,477	+		AO353_16660	0.82	+0.4
3,699,477	+		AO353_16660	0.82	+2.0
3,699,477	+		AO353_16660	0.82	-0.0
3,699,477	+		AO353_16660	0.82	-1.7
3,699,478	-		AO353_16660	0.82	-1.1
3,699,478	-		AO353_16660	0.82	-0.6
3,699,478	-		AO353_16660	0.82	-1.5
3,699,478	-		AO353_16660	0.82	-2.3
3,699,478	-		AO353_16660	0.82	-1.0
3,699,478	-		AO353_16660	0.82	+2.5
3,699,532	-		AO353_16660	0.88	-1.7
3,699,532	-		AO353_16660	0.88	-1.2
3,699,538	+		AO353_16660	0.88	-2.4
3,699,538	+		AO353_16660	0.88	+0.7
3,699,538	+		AO353_16660	0.88	+2.0
3,699,538	+		AO353_16660	0.88	-1.5
3,699,538	+		AO353_16660	0.88	-1.0
3,699,539	-		AO353_16660	0.88	+0.2
3,699,539	-		AO353_16660	0.88	-0.2
3,699,539	-		AO353_16660	0.88	+0.2
3,699,539	-		AO353_16660	0.88	+0.0
3,699,539	-		AO353_16660	0.88	-1.7
3,699,539	-		AO353_16660	0.88	-2.0
3,699,539	-		AO353_16660	0.88	-0.0
3,699,539	-		AO353_16660	0.88	+2.2
3,699,539	-		AO353_16660	0.88	-1.6
3,699,539	-		AO353_16660	0.88	-0.2
3,699,539	-		AO353_16660	0.88	+0.5
3,699,539	-		AO353_16660	0.88	+0.4
3,699,539	-		AO353_16660	0.88	-1.9
3,699,649	+				+0.4
3,699,650	-				-0.0
3,699,806	+		AO353_16665	0.24	-0.4
3,699,916	+		AO353_16665	0.40	+0.6
3,699,916	+		AO353_16665	0.40	+0.4
3,699,916	+		AO353_16665	0.40	-0.8
3,699,961	+		AO353_16665	0.47	-0.4
3,699,961	+		AO353_16665	0.47	-1.5
3,699,961	+		AO353_16665	0.47	-0.0
3,699,962	-		AO353_16665	0.47	-0.8
3,699,962	-		AO353_16665	0.47	-1.6
3,699,962	-		AO353_16665	0.47	+0.7
3,699,962	-		AO353_16665	0.47	+1.6
3,699,962	-		AO353_16665	0.47	-0.7
3,699,975	-		AO353_16665	0.49	+2.0
3,700,002	-		AO353_16665	0.53	+1.2
3,700,065	+		AO353_16665	0.63	-2.4
3,700,065	+		AO353_16665	0.63	-2.0
3,700,065	+		AO353_16665	0.63	+1.9
3,700,174	+		AO353_16665	0.79	-0.8
3,700,174	+		AO353_16665	0.79	-1.0
3,700,174	+		AO353_16665	0.79	-1.0
3,700,175	-		AO353_16665	0.80	-1.7
3,700,275	+				-0.6
3,700,276	-				+0.2
3,700,276	-				-0.7
3,700,276	-				+0.6
3,700,301	+				-0.6
3,700,302	-				-0.6
3,700,348	+				-0.0
3,700,348	+				+0.2
3,700,348	+				-0.5
3,700,349	-				-1.4
3,700,367	+				-2.4
3,700,367	+				-1.0
3,700,367	+				-0.0
3,700,367	+				+2.0
3,700,367	+				+2.0
3,700,368	-				+1.5
3,700,368	-				-0.7
3,700,368	-				-0.6
3,700,368	-				-0.6
3,700,368	-				+1.0
3,700,368	-				-1.0
3,700,382	+				-0.0
3,700,383	-				+2.8
3,700,383	-				-1.5
3,700,383	-				-1.9
3,700,383	-				+0.4
3,700,460	+		AO353_16670	0.17	+0.8
3,700,489	-		AO353_16670	0.23	-1.8
3,700,551	+		AO353_16670	0.34	-1.0
3,700,551	+		AO353_16670	0.34	-1.0
3,700,551	+		AO353_16670	0.34	+0.5
3,700,576	+		AO353_16670	0.39	+1.5
3,700,576	+		AO353_16670	0.39	-0.0
3,700,577	-		AO353_16670	0.39	+1.0
3,700,577	-		AO353_16670	0.39	+0.8
3,700,611	+		AO353_16670	0.46	-1.0
3,700,612	-		AO353_16670	0.46	-0.8
3,700,612	-		AO353_16670	0.46	-0.0
3,700,635	+		AO353_16670	0.50	-1.6
3,700,635	+		AO353_16670	0.50	+2.6
3,700,635	+		AO353_16670	0.50	-1.5
3,700,635	+		AO353_16670	0.50	+0.4
3,700,636	-		AO353_16670	0.50	-1.5
3,700,636	-		AO353_16670	0.50	+1.0
3,700,636	-		AO353_16670	0.50	+1.9
3,700,665	+		AO353_16670	0.56	-1.6
3,700,692	+		AO353_16670	0.61	-1.5
3,700,692	+		AO353_16670	0.61	+2.9
3,700,692	+		AO353_16670	0.61	+1.0
3,700,692	+		AO353_16670	0.61	-1.2
3,700,692	+		AO353_16670	0.61	+0.4
3,700,692	+		AO353_16670	0.61	-0.4
3,700,692	+		AO353_16670	0.61	+3.3
3,700,692	+		AO353_16670	0.61	-1.4
3,700,692	+		AO353_16670	0.61	+0.2
3,700,692	+		AO353_16670	0.61	+1.0
3,700,693	-		AO353_16670	0.61	-1.2
3,700,693	-		AO353_16670	0.61	-0.4
3,700,693	-		AO353_16670	0.61	-0.0
3,700,693	-		AO353_16670	0.61	-0.0
3,700,693	-		AO353_16670	0.61	+0.1
3,700,693	-		AO353_16670	0.61	+1.0
3,700,693	-		AO353_16670	0.61	-1.0
3,700,693	-		AO353_16670	0.61	-2.5
3,700,693	-		AO353_16670	0.61	-1.8
3,700,693	-		AO353_16670	0.61	-2.0
3,700,693	-		AO353_16670	0.61	-1.2
3,700,693	-		AO353_16670	0.61	+2.4
3,700,693	-		AO353_16670	0.61	-0.6
3,700,693	-		AO353_16670	0.61	+2.3
3,700,694	+		AO353_16670	0.61	-0.0
3,700,695	-		AO353_16670	0.62	+3.3
3,700,714	+		AO353_16670	0.65	-0.4
3,700,714	+		AO353_16670	0.65	-0.0
3,700,714	+		AO353_16670	0.65	+1.8
3,700,737	-		AO353_16670	0.69	+2.8
3,700,878	-				+1.6
3,701,008	+				+0.2
3,701,009	-				-0.8
3,701,009	-				+2.2
3,701,097	-				+2.0
3,701,110	+				-1.6
3,701,185	+		AO353_16675	0.14	-0.2
3,701,185	+		AO353_16675	0.14	+2.2
3,701,285	+		AO353_16675	0.26	+0.4