Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15065

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
3,333,873	+		AO353_15060	0.44	-1.6
3,333,873	+		AO353_15060	0.44	-0.8
3,333,874	-		AO353_15060	0.44	-1.0
3,333,874	-		AO353_15060	0.44	+0.4
3,333,893	+		AO353_15060	0.46	+1.1
3,333,930	+		AO353_15060	0.49	-0.7
3,334,110	+		AO353_15060	0.62	-0.3
3,334,111	-		AO353_15060	0.62	-3.1
3,334,161	-		AO353_15060	0.66	-1.6
3,334,161	-		AO353_15060	0.66	-0.7
3,334,220	+		AO353_15060	0.71	-0.5
3,334,220	+		AO353_15060	0.71	-0.3
3,334,221	-		AO353_15060	0.71	+1.3
3,334,221	-		AO353_15060	0.71	+3.2
3,334,221	-		AO353_15060	0.71	-2.1
3,334,221	-		AO353_15060	0.71	+1.7
3,334,221	-		AO353_15060	0.71	+2.9
3,334,221	-		AO353_15060	0.71	-1.8
3,334,221	-		AO353_15060	0.71	+1.5
3,334,221	-		AO353_15060	0.71	-2.2
3,334,224	+		AO353_15060	0.71	-0.7
3,334,224	+		AO353_15060	0.71	+1.1
3,334,224	+		AO353_15060	0.71	-0.7
3,334,224	+		AO353_15060	0.71	-2.3
3,334,224	+		AO353_15060	0.71	+1.8
3,334,224	+		AO353_15060	0.71	-2.8
3,334,224	+		AO353_15060	0.71	+1.5
3,334,224	+		AO353_15060	0.71	-0.5
3,334,224	+		AO353_15060	0.71	-0.5
3,334,224	+		AO353_15060	0.71	-0.9
3,334,224	+		AO353_15060	0.71	+0.8
3,334,224	+		AO353_15060	0.71	+0.5
3,334,224	+		AO353_15060	0.71	+0.5
3,334,224	+		AO353_15060	0.71	-1.4
3,334,224	+		AO353_15060	0.71	-1.1
3,334,224	+		AO353_15060	0.71	+0.9
3,334,224	+		AO353_15060	0.71	+0.3
3,334,224	+		AO353_15060	0.71	-0.9
3,334,224	+		AO353_15060	0.71	-0.5
3,334,224	+		AO353_15060	0.71	-1.9
3,334,224	+		AO353_15060	0.71	+1.1
3,334,224	+		AO353_15060	0.71	+2.4
3,334,224	+		AO353_15060	0.71	-0.5
3,334,224	+		AO353_15060	0.71	+3.5
3,334,224	+		AO353_15060	0.71	+0.1
3,334,224	+		AO353_15060	0.71	-1.4
3,334,224	+		AO353_15060	0.71	-0.5
3,334,224	+		AO353_15060	0.71	-2.1
3,334,225	-		AO353_15060	0.71	-1.6
3,334,225	-		AO353_15060	0.71	-1.8
3,334,225	-		AO353_15060	0.71	-0.3
3,334,225	-		AO353_15060	0.71	-0.7
3,334,225	-		AO353_15060	0.71	+0.1
3,334,225	-		AO353_15060	0.71	-1.0
3,334,225	-		AO353_15060	0.71	-0.5
3,334,225	-		AO353_15060	0.71	-0.0
3,334,225	-		AO353_15060	0.71	-0.5
3,334,225	-		AO353_15060	0.71	-1.6
3,334,225	-		AO353_15060	0.71	+0.1
3,334,225	-		AO353_15060	0.71	+0.2
3,334,225	-		AO353_15060	0.71	-2.1
3,334,225	-		AO353_15060	0.71	+0.7
3,334,225	-		AO353_15060	0.71	-0.5
3,334,225	-		AO353_15060	0.71	+0.6
3,334,225	-		AO353_15060	0.71	-1.9
3,334,225	-		AO353_15060	0.71	+1.1
3,334,225	-		AO353_15060	0.71	-1.1
3,334,225	-		AO353_15060	0.71	+2.1
3,334,225	-		AO353_15060	0.71	-1.3
3,334,225	-		AO353_15060	0.71	-0.3
3,334,226	+		AO353_15060	0.71	+0.5
3,334,226	+		AO353_15060	0.71	-0.5
3,334,226	+		AO353_15060	0.71	-1.9
3,334,226	+		AO353_15060	0.71	+0.7
3,334,226	+		AO353_15060	0.71	-0.5
3,334,226	+		AO353_15060	0.71	-0.9
3,334,226	+		AO353_15060	0.71	+2.0
3,334,226	+		AO353_15060	0.71	-0.9
3,334,226	+		AO353_15060	0.71	+0.5
3,334,226	+		AO353_15060	0.71	-0.5
3,334,226	+		AO353_15060	0.71	-0.0
3,334,226	+		AO353_15060	0.71	-1.7
3,334,226	+		AO353_15060	0.71	-0.9
3,334,226	+		AO353_15060	0.71	-1.3
3,334,227	-		AO353_15060	0.71	+0.5
3,334,227	-		AO353_15060	0.71	+1.9
3,334,227	-		AO353_15060	0.71	+2.7
3,334,227	-		AO353_15060	0.71	-1.1
3,334,227	-		AO353_15060	0.71	-1.9
3,334,227	-		AO353_15060	0.71	+1.7
3,334,236	+		AO353_15060	0.72	+1.1
3,334,237	-		AO353_15060	0.72	-2.5
3,334,237	-		AO353_15060	0.72	-0.4
3,334,244	+		AO353_15060	0.72	+0.7
3,334,244	+		AO353_15060	0.72	-1.4
3,334,244	+		AO353_15060	0.72	-0.5
3,334,244	+		AO353_15060	0.72	+3.7
3,334,245	-		AO353_15060	0.72	+1.7
3,334,245	-		AO353_15060	0.72	-0.5
3,334,245	-		AO353_15060	0.72	-0.7
3,334,245	-		AO353_15060	0.72	+0.5
3,334,403	+		AO353_15060	0.84	-0.3
3,334,403	+		AO353_15060	0.84	+3.1
3,334,403	+		AO353_15060	0.84	-2.6
3,334,403	+		AO353_15060	0.84	+0.1
3,334,403	+		AO353_15060	0.84	+0.1
3,334,403	+		AO353_15060	0.84	+0.7
3,334,403	+		AO353_15060	0.84	-0.3
3,334,403	+		AO353_15060	0.84	+1.7
3,334,403	+		AO353_15060	0.84	-3.0
3,334,403	+		AO353_15060	0.84	-0.9
3,334,403	+		AO353_15060	0.84	-1.3
3,334,404	-		AO353_15060	0.84	-1.4
3,334,404	-		AO353_15060	0.84	+1.1
3,334,404	-		AO353_15060	0.84	+1.9
3,334,404	-		AO353_15060	0.84	-0.3
3,334,404	-		AO353_15060	0.84	-0.5
3,334,404	-		AO353_15060	0.84	+4.8
3,334,404	-		AO353_15060	0.84	+2.4
3,334,404	-		AO353_15060	0.84	-0.5
3,334,404	-		AO353_15060	0.84	-0.7
3,334,454	+		AO353_15060	0.88	-0.7
3,334,454	+		AO353_15060	0.88	-1.1
3,334,455	-		AO353_15060	0.88	-2.1
3,334,455	-		AO353_15060	0.88	+1.7
3,334,455	-		AO353_15060	0.88	-1.8
3,334,455	-		AO353_15060	0.88	-1.6
3,334,455	-		AO353_15060	0.88	-0.3
3,334,455	-		AO353_15060	0.88	-0.3
3,334,511	+				-0.7
3,334,511	+				-0.5
3,334,511	+				+2.3
3,334,511	+				+0.5
3,334,511	+				+1.1
3,334,512	-				+2.3
3,334,512	-				-0.9
3,334,512	-				-0.9
3,334,512	-				+1.1
3,334,512	-				-0.5
3,334,512	-				-2.6
3,334,512	-				-1.7
3,334,530	+				+0.9
3,334,532	+				+0.1
3,334,532	+				+1.1
3,334,532	+				+1.6
3,334,532	+				-1.8
3,334,532	+				+0.7
3,334,532	+				-1.3
3,334,532	+				-0.3
3,334,532	+				-0.7
3,334,533	-				-1.1
3,334,533	-				-1.6
3,334,533	-				-0.4
3,334,533	-				-1.0
3,334,533	-				+1.5
3,334,533	-				-0.3
3,334,533	-				+1.1
3,334,533	-				+0.4
3,334,533	-				+1.5
3,334,533	-				+0.5
3,334,533	-				+2.1
3,334,533	-				-0.3
3,334,533	-				+2.6
3,334,533	-				+2.7
3,334,533	-				-0.7
3,334,533	-				+0.5
3,334,533	-				+0.2
3,334,555	-				-1.4
3,334,978	+		AO353_15065	0.56	+1.7
3,334,979	-		AO353_15065	0.56	-0.5
3,334,979	-		AO353_15065	0.56	-0.3
3,334,979	-		AO353_15065	0.56	+3.6
3,335,081	+		AO353_15065	0.71	+0.5
3,335,081	+		AO353_15065	0.71	+0.7
3,335,082	-		AO353_15065	0.71	-2.6
3,335,137	+		AO353_15065	0.80	-0.7
3,335,137	+		AO353_15065	0.80	+0.1
3,335,137	+		AO353_15065	0.80	+1.3
3,335,137	+		AO353_15065	0.80	-1.4
3,335,137	+		AO353_15065	0.80	+2.8
3,335,138	-		AO353_15065	0.80	+0.1
3,335,138	-		AO353_15065	0.80	+2.3
3,335,138	-		AO353_15065	0.80	+1.3
3,335,138	-		AO353_15065	0.80	-1.1
3,335,270	+				-2.6
3,335,270	+				+1.1
3,335,270	+				-1.7
3,335,270	+				+2.1
3,335,270	+				+1.4
3,335,270	+				-0.3
3,335,271	-				+0.5
3,335,271	-				+0.5
3,335,271	-				-0.5
3,335,271	-				-0.1
3,335,271	-				-2.6
3,335,297	-				-1.3
3,335,371	-				-1.5
3,335,371	-				+3.3
3,335,371	-				-1.1
3,335,371	-				-0.5
3,335,442	+		AO353_15070	0.14	+0.5
3,335,443	-		AO353_15070	0.14	-0.9
3,335,443	-		AO353_15070	0.14	+2.1
3,335,443	-		AO353_15070	0.14	-0.3
3,335,443	-		AO353_15070	0.14	+0.3
3,335,443	-		AO353_15070	0.14	-0.9
3,335,443	-		AO353_15070	0.14	+1.3
3,335,495	+		AO353_15070	0.34	-0.7
3,335,495	+		AO353_15070	0.34	+0.1
3,335,496	-		AO353_15070	0.34	+0.1
3,335,505	+		AO353_15070	0.38	-1.3
3,335,505	+		AO353_15070	0.38	-0.1
3,335,505	+		AO353_15070	0.38	+1.5
3,335,505	+		AO353_15070	0.38	+1.1
3,335,505	+		AO353_15070	0.38	+1.4
3,335,505	+		AO353_15070	0.38	-1.3
3,335,505	+		AO353_15070	0.38	-1.9
3,335,505	+		AO353_15070	0.38	-0.5
3,335,505	+		AO353_15070	0.38	+0.5
3,335,505	+		AO353_15070	0.38	-0.1
3,335,505	+		AO353_15070	0.38	+1.1
3,335,505	+		AO353_15070	0.38	+1.1
3,335,505	+		AO353_15070	0.38	-0.4
3,335,505	+		AO353_15070	0.38	-1.3
3,335,505	+		AO353_15070	0.38	-1.8
3,335,505	+		AO353_15070	0.38	-0.3
3,335,505	+		AO353_15070	0.38	-1.3
3,335,505	+		AO353_15070	0.38	+0.7
3,335,505	+		AO353_15070	0.38	-1.9
3,335,505	+		AO353_15070	0.38	-0.7
3,335,505	+		AO353_15070	0.38	+0.4
3,335,505	+		AO353_15070	0.38	-2.0
3,335,506	-		AO353_15070	0.38	-2.2
3,335,506	-		AO353_15070	0.38	+1.9
3,335,506	-		AO353_15070	0.38	+0.5
3,335,506	-		AO353_15070	0.38	+1.1
3,335,506	-		AO353_15070	0.38	-1.8
3,335,506	-		AO353_15070	0.38	+0.5
3,335,506	-		AO353_15070	0.38	-2.1
3,335,506	-		AO353_15070	0.38	+1.1
3,335,506	-		AO353_15070	0.38	+1.7
3,335,506	-		AO353_15070	0.38	-1.3
3,335,506	-		AO353_15070	0.38	+0.1
3,335,506	-		AO353_15070	0.38	-0.2
3,335,506	-		AO353_15070	0.38	-1.6
3,335,506	-		AO353_15070	0.38	+0.5
3,335,506	-		AO353_15070	0.38	+2.7
3,335,506	-		AO353_15070	0.38	-2.7
3,335,506	-		AO353_15070	0.38	+1.3
3,335,506	-		AO353_15070	0.38	+0.1
3,335,547	+		AO353_15070	0.54	-0.4
3,335,547	+		AO353_15070	0.54	-1.6
3,335,547	+		AO353_15070	0.54	-0.4
3,335,548	-		AO353_15070	0.54	-1.3
3,335,548	-		AO353_15070	0.54	+1.5
3,335,548	-		AO353_15070	0.54	+1.8
3,335,628	+		AO353_15070	0.85	+1.1
3,335,628	+		AO353_15070	0.85	+1.1
3,335,628	+		AO353_15070	0.85	+0.2
3,335,628	+		AO353_15070	0.85	-0.3
3,335,628	+		AO353_15070	0.85	+1.4
3,335,628	+		AO353_15070	0.85	+1.4
3,335,628	+		AO353_15070	0.85	+0.1
3,335,628	+		AO353_15070	0.85	-0.5
3,335,629	-		AO353_15070	0.85	-2.1
3,335,629	-		AO353_15070	0.85	+2.9
3,335,629	-		AO353_15070	0.85	-1.3
3,335,715	+				-1.7
3,335,715	+				+0.1
3,335,715	+				+1.7
3,335,715	+				+1.1
3,335,715	+				+1.1
3,335,715	+				-0.3
3,335,715	+				-0.3
3,335,715	+				-1.5
3,335,715	+				-0.7
3,335,715	+				-2.4
3,335,715	+				-1.1
3,335,716	-				-0.3
3,335,716	-				+1.2
3,335,716	-				-1.1
3,335,716	-				+2.3
3,335,716	-				-2.3
3,335,716	-				-0.3
3,335,716	-				-0.5
3,335,740	+				-0.2
3,335,740	+				+2.1
3,335,740	+				-2.0
3,335,740	+				-1.3
3,335,741	-				+0.1
3,335,741	-				-0.9
3,335,749	+				+3.7
3,335,749	+				-0.5
3,335,749	+				-2.0
3,335,749	+				-1.1
3,335,749	+				+3.2
3,335,749	+				+1.1
3,335,749	+				+1.1
3,335,749	+				+0.1
3,335,749	+				-1.1
3,335,750	-				-0.7
3,335,750	-				-1.6
3,335,750	-				-0.3
3,335,750	-				+0.9
3,335,750	-				+0.7
3,335,750	-				-0.1
3,335,750	-				+0.7
3,335,750	-				-0.9
3,335,750	-				+2.4
3,335,750	-				+0.1
3,335,804	+				+1.1
3,335,804	+				-2.5
3,335,804	+				-1.3
3,335,804	+				+1.0
3,335,804	+				+1.5
3,335,804	+				-1.3
3,335,834	+				-1.3
3,335,834	+				-0.5
3,335,834	+				-0.3
3,335,834	+				-0.3
3,335,834	+				-1.7
3,335,834	+				+2.2
3,335,834	+				-1.5
3,335,835	-				-1.2
3,335,835	-				-1.1
3,335,835	-				-1.3
3,335,835	-				+0.1
3,335,835	-				+1.0
3,335,835	-				-0.5
3,335,835	-				-0.3
3,335,835	-				+2.6
3,335,835	-				-0.5
3,335,835	-				+1.1
3,335,838	+				-2.0
3,335,838	+				-1.9
3,335,838	+				-1.4
3,335,838	+				-0.3
3,335,838	+				+3.2
3,335,838	+				-1.3
3,335,839	-				-0.3
3,335,839	-				-0.9
3,335,839	-				+0.3
3,335,839	-				-1.1
3,335,839	-				+1.1
3,336,008	+		AO353_15075	0.36	+3.1
3,336,008	+		AO353_15075	0.36	+0.1
3,336,008	+		AO353_15075	0.36	+3.9
3,336,009	-		AO353_15075	0.36	+0.1
3,336,009	-		AO353_15075	0.36	+2.1
3,336,009	-		AO353_15075	0.36	-1.0
3,336,122	+		AO353_15075	0.59	+0.6
3,336,122	+		AO353_15075	0.59	+0.3
3,336,122	+		AO353_15075	0.59	-0.7
3,336,123	-		AO353_15075	0.59	+1.1
3,336,123	-		AO353_15075	0.59	-1.3
3,336,123	-		AO353_15075	0.59	-2.5
3,336,123	-		AO353_15075	0.59	-0.3
3,336,123	-		AO353_15075	0.59	+0.9
3,336,123	-		AO353_15075	0.59	-2.6
3,336,123	-		AO353_15075	0.59	-0.9
3,336,123	-		AO353_15075	0.59	+4.8
3,336,125	-		AO353_15075	0.59	+2.1
3,336,125	-		AO353_15075	0.59	+2.2
3,336,125	-		AO353_15075	0.59	+1.1
3,336,125	-				+0.5