Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14985

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
3,311,603	+		AO353_14980	0.69	-1.1
3,311,603	+		AO353_14980	0.69	-0.9
3,311,641	+		AO353_14980	0.71	-1.1
3,311,641	+		AO353_14980	0.71	-0.6
3,311,641	+		AO353_14980	0.71	-1.4
3,311,642	-		AO353_14980	0.71	+2.1
3,311,642	-		AO353_14980	0.71	+0.1
3,311,642	-		AO353_14980	0.71	-0.7
3,311,642	-		AO353_14980	0.71	-0.2
3,311,642	-		AO353_14980	0.71	+2.4
3,311,692	+		AO353_14980	0.73	-1.6
3,311,692	+		AO353_14980	0.73	-1.4
3,311,692	+		AO353_14980	0.73	-0.6
3,311,692	+		AO353_14980	0.73	-0.9
3,311,692	+		AO353_14980	0.73	-1.7
3,311,692	+		AO353_14980	0.73	+0.9
3,311,692	+		AO353_14980	0.73	-0.1
3,311,692	+		AO353_14980	0.73	+2.8
3,311,692	+		AO353_14980	0.73	-0.9
3,311,692	+		AO353_14980	0.73	-2.4
3,311,693	-		AO353_14980	0.73	-0.1
3,311,693	-		AO353_14980	0.73	-0.9
3,311,693	-		AO353_14980	0.73	+4.7
3,311,693	-		AO353_14980	0.73	+1.5
3,311,693	-		AO353_14980	0.73	+0.5
3,311,693	-		AO353_14980	0.73	+2.2
3,311,693	-		AO353_14980	0.73	-0.9
3,311,693	-		AO353_14980	0.73	-1.6
3,311,693	-		AO353_14980	0.73	+1.4
3,311,693	-		AO353_14980	0.73	-0.7
3,311,693	-		AO353_14980	0.73	-1.4
3,311,693	-		AO353_14980	0.73	+1.3
3,311,693	-		AO353_14980	0.73	-0.2
3,311,695	+		AO353_14980	0.74	+0.5
3,311,696	-		AO353_14980	0.74	+3.5
3,311,696	-		AO353_14980	0.74	+0.5
3,311,696	-		AO353_14980	0.74	-2.0
3,311,696	-		AO353_14980	0.74	+1.8
3,311,834	+		AO353_14980	0.80	-1.8
3,311,834	+		AO353_14980	0.80	+0.5
3,311,834	+		AO353_14980	0.80	-0.7
3,311,835	-		AO353_14980	0.80	-1.8
3,311,845	+		AO353_14980	0.81	-0.5
3,311,846	-		AO353_14980	0.81	+0.3
3,311,846	-		AO353_14980	0.81	+1.9
3,311,890	+		AO353_14980	0.83	+1.6
3,311,890	+		AO353_14980	0.83	-0.6
3,311,890	+		AO353_14980	0.83	-1.8
3,311,890	+		AO353_14980	0.83	+0.3
3,311,890	+		AO353_14980	0.83	-1.1
3,311,890	+		AO353_14980	0.83	-0.9
3,311,890	+		AO353_14980	0.83	-0.4
3,311,890	+		AO353_14980	0.83	+2.1
3,311,890	+		AO353_14980	0.83	-0.8
3,311,890	+		AO353_14980	0.83	-1.8
3,311,890	+		AO353_14980	0.83	+2.1
3,311,890	+		AO353_14980	0.83	-1.1
3,311,890	+		AO353_14980	0.83	+0.8
3,311,890	+		AO353_14980	0.83	-2.9
3,311,891	-		AO353_14980	0.83	+1.6
3,311,891	-		AO353_14980	0.83	+0.5
3,311,891	-		AO353_14980	0.83	-0.2
3,311,891	-		AO353_14980	0.83	-2.2
3,311,891	-		AO353_14980	0.83	-0.2
3,311,891	-		AO353_14980	0.83	-1.0
3,311,891	-		AO353_14980	0.83	-0.7
3,311,891	-		AO353_14980	0.83	+0.2
3,311,891	-		AO353_14980	0.83	+2.6
3,311,891	-		AO353_14980	0.83	-0.9
3,311,891	-		AO353_14980	0.83	+0.5
3,312,178	+				-2.0
3,312,178	+				+1.3
3,312,178	+				+3.7
3,312,178	+				-1.6
3,312,178	+				-2.3
3,312,178	+				+2.8
3,312,178	+				-1.4
3,312,178	+				-0.7
3,312,178	+				-0.7
3,312,178	+				+2.0
3,312,178	+				+0.5
3,312,179	-				+0.9
3,312,179	-				+1.3
3,312,179	-				-0.1
3,312,179	-				+1.1
3,312,179	-				-0.4
3,312,179	-				-0.7
3,312,179	-				+2.2
3,312,179	-				-1.2
3,312,278	+				+0.4
3,312,278	+				-2.8
3,312,278	+				+2.1
3,312,278	+				+0.8
3,312,278	+				+0.1
3,312,278	+				+0.1
3,312,279	-				+2.3
3,312,279	-				+0.3
3,312,279	-				-0.2
3,312,279	-				-2.7
3,312,297	+				+1.4
3,312,298	-				+2.5
3,312,298	-				-1.9
3,312,368	+				+1.1
3,312,368	+				+1.1
3,312,368	+				-0.8
3,312,369	-				-3.0
3,312,411	+				-1.2
3,312,412	-				-1.2
3,312,412	-				+1.5
3,312,420	-				+1.3
3,312,420	-				-0.9
3,312,420	-				+1.1
3,312,442	+				-1.9
3,312,442	+				-2.3
3,312,442	+				-2.1
3,312,442	+				+2.5
3,312,443	-				+2.2
3,312,443	-				+0.5
3,312,448	+				+1.3
3,312,448	+				-1.2
3,312,448	+				+1.3
3,312,449	-				+0.1
3,312,449	-				+2.5
3,312,460	+				+0.1
3,312,460	+				-1.6
3,312,460	+				-1.6
3,312,460	+				-1.1
3,312,460	+				-1.6
3,312,460	+				-1.4
3,312,460	+				-2.2
3,312,460	+				+1.9
3,312,460	+				+2.1
3,312,460	+				-2.4
3,312,460	+				+0.5
3,312,460	+				+0.1
3,312,460	+				-1.4
3,312,460	+				+1.7
3,312,460	+				+1.2
3,312,460	+				-2.0
3,312,460	+				-2.6
3,312,460	+				+0.8
3,312,460	+				-2.0
3,312,460	+				+2.1
3,312,461	-				-0.5
3,312,461	-				-3.0
3,312,461	-				-1.2
3,312,461	-				+1.4
3,312,461	-				-0.6
3,312,461	-				-1.1
3,312,461	-				+2.1
3,312,461	-				+3.9
3,312,461	-				-0.2
3,312,461	-				-0.7
3,312,461	-				-0.5
3,312,461	-				-0.7
3,312,461	-				-1.2
3,312,461	-				-0.9
3,312,461	-				-0.7
3,312,461	-				-0.9
3,312,461	-				-0.2
3,312,473	+				+0.1
3,312,473	+				-0.9
3,312,473	+				-0.0
3,312,473	+				-1.1
3,312,473	+				-0.2
3,312,473	+				+1.2
3,312,473	+				-0.9
3,312,473	+				+0.1
3,312,474	-				+0.1
3,312,474	-				-1.1
3,312,474	-				-1.1
3,312,474	-				-0.9
3,312,474	-				+0.1
3,312,477	+				+0.1
3,312,477	+				+0.5
3,312,477	+				+0.5
3,312,477	+				+1.1
3,312,478	-				-3.1
3,312,478	-				+1.6
3,312,478	-				-0.2
3,312,478	-				+0.1
3,312,486	+				+0.1
3,312,487	-				+0.3
3,312,487	-				-1.9
3,312,487	-				-0.5
3,312,487	-				+0.2
3,312,487	-				-2.6
3,312,506	-				+0.8
3,312,514	+				-0.5
3,312,514	+				-2.7
3,312,515	-				+1.1
3,312,539	+				-1.4
3,312,540	-				-0.2
3,312,540	-				-0.2
3,312,540	-				-0.2
3,312,540	-				+1.4
3,312,642	+		AO353_14985	0.13	+1.1
3,312,642	+		AO353_14985	0.13	+2.1
3,312,642	+		AO353_14985	0.13	+0.1
3,312,642	+		AO353_14985	0.13	+1.1
3,312,642	+		AO353_14985	0.13	+1.8
3,312,642	+		AO353_14985	0.13	+1.4
3,312,642	+		AO353_14985	0.13	-0.2
3,312,642	+		AO353_14985	0.13	+1.1
3,312,642	+		AO353_14985	0.13	+1.5
3,312,642	+		AO353_14985	0.13	+0.6
3,312,642	+		AO353_14985	0.13	-1.4
3,312,642	+		AO353_14985	0.13	-2.0
3,312,642	+		AO353_14985	0.13	-0.9
3,312,642	+		AO353_14985	0.13	-0.5
3,312,642	+		AO353_14985	0.13	-0.7
3,312,642	+		AO353_14985	0.13	+0.8
3,312,643	-		AO353_14985	0.13	+2.3
3,312,643	-		AO353_14985	0.13	+2.1
3,312,643	-		AO353_14985	0.13	+0.1
3,312,643	-		AO353_14985	0.13	-1.1
3,312,643	-		AO353_14985	0.13	-0.4
3,312,643	-		AO353_14985	0.13	-1.6
3,312,684	+		AO353_14985	0.18	-2.2
3,312,684	+		AO353_14985	0.18	+0.5
3,312,684	+		AO353_14985	0.18	+0.1
3,312,684	+		AO353_14985	0.18	-2.8
3,312,684	+		AO353_14985	0.18	-1.9
3,312,684	+		AO353_14985	0.18	-1.9
3,312,684	+		AO353_14985	0.18	+1.5
3,312,684	+		AO353_14985	0.18	+0.5
3,312,684	+		AO353_14985	0.18	+0.5
3,312,684	+		AO353_14985	0.18	-2.1
3,312,684	+		AO353_14985	0.18	-0.5
3,312,684	+		AO353_14985	0.18	+1.6
3,312,684	+		AO353_14985	0.18	-1.2
3,312,684	+		AO353_14985	0.18	-1.1
3,312,684	+		AO353_14985	0.18	+0.9
3,312,684	+		AO353_14985	0.18	-1.4
3,312,684	+		AO353_14985	0.18	+2.1
3,312,684	+		AO353_14985	0.18	+2.5
3,312,684	+		AO353_14985	0.18	-2.6
3,312,684	+		AO353_14985	0.18	-0.5
3,312,685	-		AO353_14985	0.18	+0.0
3,312,685	-		AO353_14985	0.18	+3.1
3,312,685	-		AO353_14985	0.18	+2.4
3,312,685	-		AO353_14985	0.18	-1.6
3,312,685	-		AO353_14985	0.18	+0.9
3,312,685	-		AO353_14985	0.18	+0.5
3,312,696	+		AO353_14985	0.20	-2.7
3,312,903	+		AO353_14985	0.45	-1.1
3,312,904	-		AO353_14985	0.45	+1.1
3,312,906	-		AO353_14985	0.45	+0.1
3,313,017	+		AO353_14985	0.59	-0.4
3,313,017	+		AO353_14985	0.59	+0.1
3,313,017	+		AO353_14985	0.59	+1.1
3,313,018	-		AO353_14985	0.59	+0.1
3,313,104	+				+5.7
3,313,105	-		AO353_14985	0.70	+1.1
3,313,105	-		AO353_14985	0.70	+1.9
3,313,105	-		AO353_14985	0.70	+0.9
3,313,329	+				+1.1
3,313,330	-				-2.5
3,313,471	+				-0.7
3,313,471	+				-0.5
3,313,471	+				+1.7
3,313,472	-				+1.8
3,313,472	-				-0.9
3,313,472	-				-1.4
3,313,472	-				+1.3
3,313,472	-				+2.1
3,313,472	-				+1.1
3,313,544	+				-0.2
3,313,544	+				-1.2
3,313,544	+				+0.6
3,313,544	+				+2.1
3,313,544	+				+1.1
3,313,544	+				-0.2
3,313,544	+				-0.7
3,313,544	+				+1.3
3,313,544	+				+0.1
3,313,545	-				-1.4
3,313,545	-				+2.5
3,313,545	-				+0.3
3,313,545	-				-0.9
3,313,545	-				+0.2
3,313,545	-				+1.3
3,313,545	-				+0.4
3,313,545	-				-0.2
3,313,548	+				-2.1
3,313,548	+				+3.0
3,313,548	+				-0.9
3,313,549	-				-2.5
3,313,549	-				-0.5
3,313,549	-				-1.5
3,313,579	+				-1.7
3,313,580	-				+0.1
3,313,609	+				+0.1
3,313,609	+				+0.5
3,313,609	+				-0.8
3,313,609	+				+1.7
3,313,609	+				-0.7
3,313,610	-				+0.8
3,313,610	-				-0.5
3,313,610	-				+0.1
3,313,610	-				-1.1
3,313,610	-				+1.4
3,313,694	+		AO353_14990	0.20	+0.5
3,313,695	-		AO353_14990	0.20	+2.9
3,313,739	+		AO353_14990	0.28	-1.5
3,313,740	-		AO353_14990	0.28	+1.9
3,313,740	-		AO353_14990	0.28	-0.5
3,314,174	+				-1.5
3,314,195	+				+1.6
3,314,195	+				-1.2
3,314,195	+				-0.5
3,314,196	-				-1.6
3,314,196	-				-1.1
3,314,204	+				-1.5
3,314,204	+				+2.1
3,314,204	+				+0.7
3,314,204	+				+3.1
3,314,205	-				+2.4
3,314,205	-				+1.1
3,314,205	-				-1.1
3,314,205	-				-0.7
3,314,205	-				+0.4
3,314,240	+				+0.7
3,314,241	-				-1.5
3,314,241	-				+0.4
3,314,241	-				-0.2
3,314,241	-				+0.1
3,314,241	-				+2.8
3,314,241	-				-0.7
3,314,241	-				+0.5
3,314,241	-				+0.1
3,314,241	-				-0.3
3,314,241	-				+0.5
3,314,289	+				+1.2
3,314,289	+				+0.5
3,314,289	+				+1.3
3,314,289	+				+0.6
3,314,312	+				-1.6
3,314,312	+				+1.1
3,314,312	+				+1.8
3,314,312	+				-1.2
3,314,312	+				-1.2
3,314,312	+				+1.7
3,314,312	+				-1.5
3,314,312	+				+3.1
3,314,312	+				-1.4
3,314,312	+				-0.5
3,314,312	+				-1.6
3,314,312	+				+1.2
3,314,312	+				-2.1
3,314,312	+				+1.7
3,314,312	+				-0.5
3,314,312	+				-1.6
3,314,313	-				+1.1
3,314,313	-				+2.1
3,314,313	-				+1.7
3,314,313	-				+3.3
3,314,313	-				-1.7
3,314,313	-				-1.4
3,314,313	-				+0.5
3,314,313	-				-1.8
3,314,313	-				-1.2
3,314,313	-				-0.5
3,314,313	-				-0.2
3,314,313	-				+3.1
3,314,313	-				-0.5
3,314,313	-				-0.9
3,314,313	-				+0.1
3,314,322	+				-1.6
3,314,322	+				+0.9
3,314,322	+				-0.5
3,314,322	+				+0.8
3,314,322	+				+1.8
3,314,322	+				-1.9
3,314,322	+				+0.6
3,314,322	+				-1.5
3,314,322	+				+1.1
3,314,323	-				-0.9
3,314,323	-				-0.9
3,314,323	-				-0.2
3,314,323	-				-1.0
3,314,323	-				-0.7
3,314,323	-				+0.3
3,314,323	-				-0.6