Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14440

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
3,201,136	+		AO353_14430	0.36	-1.1
3,201,136	+		AO353_14430	0.36	-1.1
3,201,136	+		AO353_14430	0.36	+1.2
3,201,136	+		AO353_14430	0.36	-2.0
3,201,136	+		AO353_14430	0.36	-0.2
3,201,137	-		AO353_14430	0.36	+1.1
3,201,137	-		AO353_14430	0.36	+0.1
3,201,137	-		AO353_14430	0.36	-1.5
3,201,137	-		AO353_14430	0.36	-0.9
3,201,156	+		AO353_14430	0.39	+2.5
3,201,156	+		AO353_14430	0.39	+0.0
3,201,157	-		AO353_14430	0.39	+0.1
3,201,157	-		AO353_14430	0.39	-1.5
3,201,157	-		AO353_14430	0.39	+0.5
3,201,395	-		AO353_14430	0.72	+2.1
3,201,395	-		AO353_14430	0.72	+0.0
3,201,413	+		AO353_14430	0.75	-0.2
3,201,413	+		AO353_14430	0.75	+0.4
3,201,413	+		AO353_14430	0.75	-0.7
3,201,413	+		AO353_14430	0.75	-0.7
3,201,414	-		AO353_14430	0.75	+1.1
3,201,414	-		AO353_14430	0.75	+2.3
3,201,414	-		AO353_14430	0.75	+1.9
3,201,414	-		AO353_14430	0.75	-1.2
3,201,524	+				-1.5
3,201,524	+				+2.0
3,201,552	+				-0.7
3,201,552	+				-1.5
3,201,552	+				+2.0
3,201,552	+				-0.2
3,201,552	+				-1.2
3,201,553	-				-0.2
3,201,553	-				+1.4
3,201,553	-				+0.6
3,201,553	-				-0.2
3,201,553	-				+1.3
3,201,596	+				-0.8
3,201,596	+				-1.2
3,201,607	-				-0.2
3,201,607	-				+1.4
3,201,813	+		AO353_14435	0.65	-2.0
3,201,813	+		AO353_14435	0.65	-0.2
3,201,819	+		AO353_14435	0.67	+2.8
3,201,819	+		AO353_14435	0.67	-1.2
3,201,820	-		AO353_14435	0.68	-1.1
3,201,820	-		AO353_14435	0.68	+1.1
3,201,820	-		AO353_14435	0.68	+0.5
3,201,820	-		AO353_14435	0.68	+1.5
3,201,820	-		AO353_14435	0.68	+0.5
3,201,820	-		AO353_14435	0.68	-0.9
3,201,820	-		AO353_14435	0.68	+0.7
3,201,820	-		AO353_14435	0.68	-1.9
3,201,839	+		AO353_14435	0.74	-1.1
3,201,926	+				+3.2
3,201,927	-				-1.6
3,201,927	-				+2.1
3,202,056	+				+1.9
3,202,107	+				+2.1
3,202,107	+				-1.8
3,202,119	+				+0.1
3,202,120	-				+2.4
3,202,128	+				+2.7
3,202,129	-				-1.9
3,202,129	-				-0.9
3,202,495	-		AO353_14440	0.44	-1.2
3,202,495	-		AO353_14440	0.44	+2.1
3,202,540	+		AO353_14440	0.49	-1.4
3,202,540	+		AO353_14440	0.49	-0.9
3,202,540	+		AO353_14440	0.49	-0.4
3,202,540	+		AO353_14440	0.49	-1.9
3,202,541	-		AO353_14440	0.49	-0.5
3,202,541	-		AO353_14440	0.49	-2.0
3,202,541	-		AO353_14440	0.49	+1.5
3,202,701	+		AO353_14440	0.67	-1.6
3,202,701	+		AO353_14440	0.67	-0.9
3,202,701	+		AO353_14440	0.67	-1.9
3,202,716	+		AO353_14440	0.68	+1.8
3,202,890	+		AO353_14440	0.88	-2.4
3,202,890	+		AO353_14440	0.88	-1.8
3,202,891	-		AO353_14440	0.88	-0.7
3,202,891	-		AO353_14440	0.88	+2.3
3,202,937	+				+0.1
3,202,937	+				-0.9
3,202,938	-				-1.2
3,202,957	+				-0.9
3,202,957	+				-0.1
3,202,957	+				-1.1
3,202,958	-				+2.4
3,202,958	-				+2.6
3,202,997	+				+0.1
3,202,997	+				-1.6
3,202,997	+				-1.2
3,202,997	+				+1.9
3,202,998	-				+0.3
3,202,998	-				-0.5
3,202,998	-				-2.5
3,202,998	-				+0.1
3,203,102	+		AO353_14445	0.11	+2.0
3,203,103	-		AO353_14445	0.11	-0.5
3,203,198	+		AO353_14445	0.20	-0.2
3,203,198	+		AO353_14445	0.20	+0.5
3,203,199	-		AO353_14445	0.20	+0.1
3,203,382	+		AO353_14445	0.38	-0.9
3,203,382	+		AO353_14445	0.38	+2.6
3,203,382	+		AO353_14445	0.38	+1.1
3,203,382	+		AO353_14445	0.38	-1.4
3,203,383	-		AO353_14445	0.38	-0.4
3,203,383	-		AO353_14445	0.38	-1.8
3,203,538	+		AO353_14445	0.53	+3.7
3,203,538	+		AO353_14445	0.53	-2.6
3,203,538	+		AO353_14445	0.53	+0.5
3,203,538	+		AO353_14445	0.53	+0.3
3,203,539	-		AO353_14445	0.53	-0.9
3,203,539	-		AO353_14445	0.53	-0.7
3,203,539	-		AO353_14445	0.53	+0.5
3,203,539	-		AO353_14445	0.53	+3.3
3,203,564	+		AO353_14445	0.55	-2.4
3,203,564	+		AO353_14445	0.55	+0.5
3,203,565	-		AO353_14445	0.55	-0.5
3,203,607	+		AO353_14445	0.59	-0.9
3,203,607	+		AO353_14445	0.59	+1.4
3,203,607	+		AO353_14445	0.59	-1.3
3,203,607	+		AO353_14445	0.59	-1.2
3,203,607	+		AO353_14445	0.59	-0.2
3,203,607	+		AO353_14445	0.59	-2.6
3,203,607	+		AO353_14445	0.59	+3.1
3,203,607	+		AO353_14445	0.59	-1.9
3,203,607	+		AO353_14445	0.59	+0.5
3,203,608	-		AO353_14445	0.59	+2.7
3,203,608	-		AO353_14445	0.59	-0.7