Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14290

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
3,169,244	-				-0.5
3,169,244	-				-0.7
3,169,282	+				+1.8
3,169,282	+				-0.5
3,169,282	+				+1.1
3,169,283	-				-1.7
3,169,283	-				-0.8
3,169,283	-				+0.7
3,169,283	-				-1.6
3,169,283	-				-0.7
3,169,298	+				+0.8
3,169,298	+				-1.7
3,169,298	+				-0.0
3,169,298	+				+1.1
3,169,299	-				+0.6
3,169,299	-				-2.4
3,169,299	-				+2.8
3,169,299	-				+0.5
3,169,299	-				-1.2
3,169,345	+				+4.1
3,169,346	-				+1.0
3,169,346	-				+0.8
3,169,455	+				+1.8
3,169,456	-				-0.2
3,169,737	+		AO353_14285	0.29	-0.2
3,169,737	+		AO353_14285	0.29	-0.7
3,169,737	+		AO353_14285	0.29	-0.7
3,169,737	+		AO353_14285	0.29	-0.7
3,169,737	+		AO353_14285	0.29	-0.3
3,169,737	+		AO353_14285	0.29	+0.5
3,169,737	+		AO353_14285	0.29	-1.5
3,169,737	+		AO353_14285	0.29	-1.6
3,169,737	+		AO353_14285	0.29	+1.3
3,169,738	-		AO353_14285	0.30	+1.8
3,169,738	-		AO353_14285	0.30	+3.1
3,169,738	-		AO353_14285	0.30	+2.5
3,169,738	-		AO353_14285	0.30	-0.1
3,169,738	-		AO353_14285	0.30	-1.7
3,169,738	-		AO353_14285	0.30	+0.7
3,169,738	-		AO353_14285	0.30	-1.1
3,169,738	-		AO353_14285	0.30	+1.1
3,169,738	-		AO353_14285	0.30	+1.0
3,169,739	+		AO353_14285	0.30	+2.2
3,169,739	+		AO353_14285	0.30	-0.5
3,169,739	+		AO353_14285	0.30	-0.7
3,169,739	+		AO353_14285	0.30	-1.2
3,169,739	+		AO353_14285	0.30	-0.7
3,169,739	+		AO353_14285	0.30	+1.6
3,169,740	-		AO353_14285	0.30	-0.9
3,169,740	-		AO353_14285	0.30	-2.5
3,169,740	-		AO353_14285	0.30	+1.0
3,169,740	-		AO353_14285	0.30	+1.2
3,169,759	+		AO353_14285	0.33	-0.9
3,169,759	+		AO353_14285	0.33	+1.2
3,169,759	+		AO353_14285	0.33	+2.3
3,169,759	+		AO353_14285	0.33	-1.6
3,169,760	-		AO353_14285	0.33	-1.1
3,169,760	-		AO353_14285	0.33	+2.4
3,169,760	-		AO353_14285	0.33	-1.4
3,169,760	-		AO353_14285	0.33	-1.7
3,170,244	+		AO353_14290	0.14	-1.2
3,170,244	+		AO353_14290	0.14	+3.2
3,170,244	+		AO353_14290	0.14	+3.1
3,170,244	+		AO353_14290	0.14	+0.4
3,170,244	+		AO353_14290	0.14	+0.4
3,170,245	-		AO353_14290	0.15	-1.8
3,170,245	-		AO353_14290	0.15	-0.9
3,170,245	-		AO353_14290	0.15	-0.5
3,170,280	+		AO353_14290	0.29	+1.8
3,170,280	+		AO353_14290	0.29	+1.7
3,170,280	+		AO353_14290	0.29	+1.1
3,170,280	+		AO353_14290	0.29	-0.5
3,170,281	-		AO353_14290	0.30	-0.2
3,170,281	-		AO353_14290	0.30	+3.5
3,170,281	-		AO353_14290	0.30	+0.5
3,170,281	-		AO353_14290	0.30	+0.5
3,170,281	-		AO353_14290	0.30	-2.4
3,170,281	-		AO353_14290	0.30	+1.5
3,170,281	-		AO353_14290	0.30	+2.8
3,170,281	-		AO353_14290	0.30	+0.7
3,170,371	-		AO353_14290	0.67	-0.7
3,170,371	-		AO353_14290	0.67	-0.9
3,170,457	+				+0.5
3,170,458	-				+0.5
3,170,487	+				+0.9
3,170,487	+				-0.5
3,170,487	+				+3.7
3,170,487	+				-2.2
3,170,487	+				-1.9
3,170,487	+				-0.7
3,170,487	+				+0.1
3,170,487	+				+2.1
3,170,487	+				+0.1
3,170,487	+				-2.3
3,170,488	-				-1.5
3,170,488	-				-1.2
3,170,488	-				+2.1
3,170,488	-				-1.4
3,170,534	+				+1.0
3,170,535	-				-0.2
3,170,535	-				-0.2
3,170,535	-				+1.1
3,170,570	+				-1.5
3,170,571	-				-0.3
3,170,585	+				-0.2
3,170,586	-				+1.4
3,170,586	-				-0.0
3,170,586	-				+0.9
3,170,586	-				-1.9
3,170,586	-				-0.5
3,170,586	-				-0.2
3,170,785	+		AO353_14295	0.23	+0.5
3,170,785	+		AO353_14295	0.23	-0.4
3,170,786	-		AO353_14295	0.23	-0.5
3,170,786	-		AO353_14295	0.23	-0.7
3,170,786	-		AO353_14295	0.23	+5.3
3,170,907	+		AO353_14295	0.36	-1.2
3,170,907	+		AO353_14295	0.36	-0.4
3,170,919	+		AO353_14295	0.37	-1.1
3,170,920	-		AO353_14295	0.37	-1.1
3,171,054	+		AO353_14295	0.52	-2.3
3,171,054	+		AO353_14295	0.52	-2.6
3,171,054	+		AO353_14295	0.52	-1.6
3,171,054	+		AO353_14295	0.52	-1.6
3,171,055	-		AO353_14295	0.52	-0.2
3,171,055	-		AO353_14295	0.52	+2.1
3,171,055	-		AO353_14295	0.52	+0.1
3,171,055	-		AO353_14295	0.52	+0.4
3,171,055	-		AO353_14295	0.52	+0.1
3,171,055	-		AO353_14295	0.52	+0.5
3,171,081	+		AO353_14295	0.55	+0.5
3,171,081	+		AO353_14295	0.55	-1.2
3,171,081	+		AO353_14295	0.55	-0.9
3,171,081	+		AO353_14295	0.55	+0.4
3,171,082	-		AO353_14295	0.55	-1.2
3,171,082	-		AO353_14295	0.55	-0.4
3,171,159	+		AO353_14295	0.63	+0.5
3,171,159	+		AO353_14295	0.63	-1.1
3,171,159	+		AO353_14295	0.63	+0.7
3,171,160	-		AO353_14295	0.63	-0.7
3,171,160	-		AO353_14295	0.63	+2.4
3,171,160	-		AO353_14295	0.63	+1.1
3,171,294	+		AO353_14295	0.77	+0.1
3,171,294	+		AO353_14295	0.77	+1.6
3,171,294	+		AO353_14295	0.77	+1.2
3,171,295	-		AO353_14295	0.78	-0.5
3,171,295	-		AO353_14295	0.78	-1.1
3,171,295	-		AO353_14295	0.78	-0.5
3,171,295	-		AO353_14295	0.78	+2.7
3,171,349	-		AO353_14295	0.83	+0.1
3,171,349	-		AO353_14295	0.83	+2.1
3,171,373	-		AO353_14295	0.86	+0.6
3,171,373	-		AO353_14295	0.86	+1.1
3,171,382	-		AO353_14295	0.87	-1.5