Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13665

Experiment: Doxycycline hyclate 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0006 mg/ml
3,033,787	-		AO353_13660	0.23	+0.8
3,033,787	-		AO353_13660	0.23	+3.8
3,033,787	-		AO353_13660	0.23	-1.7
3,033,787	-		AO353_13660	0.23	-0.0
3,033,787	-		AO353_13660	0.23	+0.6
3,033,840	-		AO353_13660	0.28	+2.7
3,033,840	-		AO353_13660	0.28	-2.7
3,033,840	-		AO353_13660	0.28	+2.0
3,033,840	-		AO353_13660	0.28	-2.5
3,033,840	-		AO353_13660	0.28	-0.7
3,033,840	-		AO353_13660	0.28	+1.9
3,033,840	-		AO353_13660	0.28	+0.6
3,033,840	-		AO353_13660	0.28	-1.7
3,033,890	-		AO353_13660	0.33	+1.7
3,034,011	-		AO353_13660	0.45	-1.4
3,034,011	-		AO353_13660	0.45	+2.2
3,034,011	-		AO353_13660	0.45	-2.1
3,034,029	-		AO353_13660	0.47	+0.8
3,034,029	-		AO353_13660	0.47	-0.8
3,034,029	-		AO353_13660	0.47	+2.4
3,034,273	-		AO353_13660	0.71	+1.3
3,034,273	-		AO353_13660	0.71	-0.3
3,034,448	-		AO353_13660	0.88	+0.8
3,034,448	-		AO353_13660	0.88	-2.7
3,034,448	-		AO353_13660	0.88	-0.4
3,034,448	-		AO353_13660	0.88	-2.1
3,034,540	-				-0.0
3,034,540	-				-1.2
3,034,540	-				+0.2
3,034,540	-				+1.0
3,034,540	-				-0.8
3,034,540	-				+0.2
3,034,540	-				-1.0
3,034,540	-				+2.3
3,034,540	-				-1.3
3,034,540	-				+0.6
3,034,540	-				-0.3
3,034,540	-				-1.2
3,034,540	-				+1.0
3,034,540	-				-3.3
3,034,540	-				+0.2
3,034,540	-				+1.6
3,034,540	-				+1.5
3,034,540	-				+0.6
3,034,540	-				+0.6
3,034,540	-				+1.9
3,034,540	-				-1.0
3,034,540	-				+3.0
3,034,540	-				+0.2
3,034,540	-				+2.2
3,034,540	-				+0.2
3,034,540	-				-0.4
3,034,540	-				+0.2
3,034,540	-				+0.8
3,034,540	-				+3.3
3,034,540	-				+1.0
3,034,540	-				+2.0
3,034,540	-				-3.1
3,034,540	-				+1.2
3,034,540	-				+1.6
3,034,542	-				+2.4
3,034,567	-				-0.2
3,034,567	-				+1.2
3,034,567	-				+5.0
3,034,659	+				-0.4
3,034,674	+				+0.2
3,034,674	+				-1.2
3,034,674	+				+0.5
3,034,675	-				+2.0
3,034,675	-				+0.6
3,034,675	-				-0.2
3,034,675	-				+0.8
3,034,675	-				+0.3
3,034,675	-				+3.9
3,034,675	-				-0.1
3,034,682	+				+0.2
3,034,683	-				-0.8
3,034,683	-				+0.9
3,034,683	-				-0.4
3,034,683	-				+1.5
3,034,683	-				+0.6
3,034,792	+				-2.4
3,034,792	+				-0.7
3,034,792	+				-1.7
3,034,793	-				+1.9
3,034,793	-				-0.2
3,034,891	+		AO353_13665	0.10	-1.4
3,034,891	+		AO353_13665	0.10	-1.4
3,034,892	-		AO353_13665	0.10	-2.2
3,034,993	+		AO353_13665	0.18	-1.7
3,034,993	+		AO353_13665	0.18	-0.2
3,034,994	-		AO353_13665	0.18	+0.2
3,034,994	-		AO353_13665	0.18	-1.3
3,034,994	-		AO353_13665	0.18	-0.0
3,034,994	-		AO353_13665	0.18	+0.3
3,035,010	+		AO353_13665	0.19	+1.1
3,035,010	+		AO353_13665	0.19	+3.3
3,035,011	-		AO353_13665	0.20	-1.4
3,035,171	-		AO353_13665	0.32	+4.5
3,035,171	-		AO353_13665	0.32	+0.6
3,035,179	+		AO353_13665	0.33	-0.7
3,035,179	+		AO353_13665	0.33	-0.2
3,035,179	+		AO353_13665	0.33	-0.2
3,035,179	+		AO353_13665	0.33	-0.2
3,035,179	+		AO353_13665	0.33	-1.0
3,035,180	-		AO353_13665	0.33	+0.2
3,035,180	-		AO353_13665	0.33	-0.0
3,035,180	-		AO353_13665	0.33	-1.8
3,035,180	-		AO353_13665	0.33	+0.7
3,035,180	-		AO353_13665	0.33	+1.2
3,035,829	-		AO353_13665	0.84	+0.3
3,035,829	-		AO353_13665	0.84	-1.5
3,035,865	-		AO353_13665	0.87	-2.8
3,036,041	+				+2.2
3,036,041	+				-0.7
3,036,041	+				+1.7
3,036,130	+				+2.2
3,036,130	+				+0.2
3,036,130	+				-1.7
3,036,131	-				+2.2
3,036,131	-				-0.2
3,036,131	-				-1.8
3,036,131	-				-0.7
3,036,261	+		AO353_13670	0.23	+1.2
3,036,261	+		AO353_13670	0.23	+1.7
3,036,262	-		AO353_13670	0.23	-0.0
3,036,298	+		AO353_13670	0.27	+0.3
3,036,299	-		AO353_13670	0.28	-0.7
3,036,299	-		AO353_13670	0.28	-2.9
3,036,299	-		AO353_13670	0.28	-1.0
3,036,299	-		AO353_13670	0.28	-1.7
3,036,299	-		AO353_13670	0.28	-1.7
3,036,453	+		AO353_13670	0.45	-1.8
3,036,453	+		AO353_13670	0.45	+1.4
3,036,453	+		AO353_13670	0.45	+0.9
3,036,454	-		AO353_13670	0.45	+0.6
3,036,883	+				+0.8
3,036,883	+				+0.3
3,036,883	+				-0.2
3,036,884	-				-0.3
3,036,884	-				+2.6
3,036,884	-				+2.2
3,036,957	+				+0.0
3,036,957	+				-1.3
3,036,958	-				-1.4
3,036,958	-				+1.2
3,036,958	-				-0.7
3,036,958	-				+0.8
3,036,991	-				-0.7
3,036,997	-				-1.5